RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 ASAH1Q13510 395 aa11.87□□□□□ -0.51
CAPN1-208ENST00000527323 MPPE1Q53F39 396 aa11.87□□□□□ -0.51
CAPN1-208ENST00000527323 ATAT1Q5SQI0 421 aa11.87□□□□□ -0.51
CAPN1-208ENST00000527323 Q6ZVU0 165 aa11.87□□□□□ -0.51
CAPN1-208ENST00000527323 HSD11B1LQ7Z5J1 315 aa11.87□□□□□ -0.51
CAPN1-208ENST00000527323 LAPTM4BQ86VI4 370 aa11.87□□□□□ -0.51
CAPN1-208ENST00000527323 LAS2Q8IYD9 372 aa11.87□□□□□ -0.51
CAPN1-208ENST00000527323 MMP21Q8N119 569 aa11.87□□□□□ -0.51
CAPN1-208ENST00000527323 C19orf18Q8NEA5 215 aa11.87□□□□□ -0.51
CAPN1-208ENST00000527323 OR8J1Q8NGP2 316 aa11.87□□□□□ -0.51
CAPN1-208ENST00000527323 JPH3Q8WXH2 748 aaPredicted RBP11.87□□□□□ -0.51
CAPN1-208ENST00000527323 RAB8BQ92930 207 aa11.87□□□□□ -0.51
CAPN1-208ENST00000527323 WDFY2Q96P53 400 aa11.87□□□□□ -0.51
CAPN1-208ENST00000527323 COMMD3Q9UBI1 195 aa11.87□□□□□ -0.51
CAPN1-208ENST00000527323 MGAT4BQ9UQ53 548 aa11.87□□□□□ -0.51
CAPN1-208ENST00000527323 IQCMA0A1B0GVH7 501 aa11.87□□□□□ -0.51
CAPN1-208ENST00000527323 GREM1O60565 184 aa11.87□□□□□ -0.51
CAPN1-208ENST00000527323 CCNYL3P0C7X3 344 aa11.87□□□□□ -0.51
CAPN1-208ENST00000527323 GPC1P35052 558 aa11.87□□□□□ -0.51
CAPN1-208ENST00000527323 RPL3P39023 403 aaKnown RBP11.87□□□□□ -0.51
CAPN1-208ENST00000527323 CTSCP53634 463 aa11.87□□□□□ -0.51
CAPN1-208ENST00000527323 POLR2LP62875 67 aaKnown RBP11.87□□□□□ -0.51
CAPN1-208ENST00000527323 HOXC5Q00444 222 aa11.87□□□□□ -0.51
CAPN1-208ENST00000527323 CRTC2Q53ET0 693 aaPredicted RBP11.87□□□□□ -0.51
CAPN1-208ENST00000527323 CCDC149Q6ZUS6 474 aa11.87□□□□□ -0.51
CAPN1-208ENST00000527323 VN1R5Q7Z5H4 357 aa11.87□□□□□ -0.51
CAPN1-208ENST00000527323 C11orf74Q86VG3 221 aa11.87□□□□□ -0.51
CAPN1-208ENST00000527323 RBM45Q8IUH3 476 aaKnown RBP11.87□□□□□ -0.51
CAPN1-208ENST00000527323 SLC25A46Q96AG3 418 aa11.87□□□□□ -0.51
CAPN1-208ENST00000527323 NDUFB11Q9NX14 153 aa11.87□□□□□ -0.51
CAPN1-208ENST00000527323 H1F0P07305 194 aaKnown RBP11.86□□□□□ -0.51
CAPN1-208ENST00000527323 IL3P08700 152 aa11.86□□□□□ -0.51
CAPN1-208ENST00000527323 TRAPPC2P0DI81 140 aa11.86□□□□□ -0.51
CAPN1-208ENST00000527323 TRAPPC2BP0DI82 140 aa11.86□□□□□ -0.51
CAPN1-208ENST00000527323 PCBP3P57721 371 aaKnown RBP11.86□□□□□ -0.51
CAPN1-208ENST00000527323 MLLT11Q13015 90 aaPredicted RBP11.86□□□□□ -0.51
CAPN1-208ENST00000527323 SPDYE7PQ495Y7 208 aa11.86□□□□□ -0.51
CAPN1-208ENST00000527323 Q5BKY6 102 aa11.86□□□□□ -0.51
CAPN1-208ENST00000527323 TYW3Q6IPR3 259 aaKnown RBP11.86□□□□□ -0.51
CAPN1-208ENST00000527323 ZNF770Q6IQ21 691 aaPredicted RBP11.86□□□□□ -0.51
CAPN1-208ENST00000527323 ERAP2Q6P179 960 aa11.86□□□□□ -0.51
CAPN1-208ENST00000527323 SZRD1Q7Z422 152 aa11.86□□□□□ -0.51
CAPN1-208ENST00000527323 GDPD1Q8N9F7 314 aa11.86□□□□□ -0.51
CAPN1-208ENST00000527323 FIBINQ8TAL6 211 aa11.86□□□□□ -0.51
CAPN1-208ENST00000527323 SP7Q8TDD2 431 aaPredicted RBP11.86□□□□□ -0.51
CAPN1-208ENST00000527323 CREB3L4Q8TEY5 395 aa11.86□□□□□ -0.51
CAPN1-208ENST00000527323 ZNF707Q96C28 371 aaPredicted RBP11.86□□□□□ -0.51
CAPN1-208ENST00000527323 ECHDC3Q96DC8 303 aa11.86□□□□□ -0.51
CAPN1-208ENST00000527323 SORBS1Q9BX66 1292 aaKnown RBP11.86□□□□□ -0.51
CAPN1-208ENST00000527323 SLC6A16Q9GZN6 736 aa11.86□□□□□ -0.51
CAPN1-208ENST00000527323 MIXL1Q9H2W2 232 aa11.86□□□□□ -0.51
CAPN1-208ENST00000527323 SEMA3GQ9NS98 782 aa11.86□□□□□ -0.51
CAPN1-208ENST00000527323 REV1Q9UBZ9 1251 aa11.86□□□□□ -0.51
CAPN1-208ENST00000527323 CARD8Q9Y2G2 431 aa11.86□□□□□ -0.51
CAPN1-208ENST00000527323 YARS2Q9Y2Z4 477 aaKnown RBP11.86□□□□□ -0.51
CAPN1-208ENST00000527323 SRPRAP08240 638 aaKnown RBP11.86□□□□□ -0.51
CAPN1-208ENST00000527323 PSKH1P11801 424 aa11.86□□□□□ -0.51
CAPN1-208ENST00000527323 MYL12AP19105 171 aa11.86□□□□□ -0.51
CAPN1-208ENST00000527323 WASP42768 502 aa11.86□□□□□ -0.51
CAPN1-208ENST00000527323 KIR2DL3P43628 341 aa11.86□□□□□ -0.51
CAPN1-208ENST00000527323 RECQLP46063 649 aaPredicted RBP11.86□□□□□ -0.51
CAPN1-208ENST00000527323 DGKGP49619 791 aa11.86□□□□□ -0.51
CAPN1-208ENST00000527323 CAV3P56539 151 aa11.86□□□□□ -0.51
CAPN1-208ENST00000527323 GALK2Q01415 458 aa11.86□□□□□ -0.51
CAPN1-208ENST00000527323 PRSS53Q2L4Q9 553 aa11.86□□□□□ -0.51
CAPN1-208ENST00000527323 GLYR1Q49A26 553 aaPredicted RBP11.86□□□□□ -0.51
CAPN1-208ENST00000527323 SLC35F1Q5T1Q4 408 aa11.86□□□□□ -0.51
CAPN1-208ENST00000527323 TRIQKQ629K1 86 aa11.86□□□□□ -0.51
CAPN1-208ENST00000527323 TMEM220Q6QAJ8 160 aa11.86□□□□□ -0.51
CAPN1-208ENST00000527323 Q6ZNB5 142 aa11.86□□□□□ -0.51
CAPN1-208ENST00000527323 OR56A3Q8NH54 315 aa11.86□□□□□ -0.51
CAPN1-208ENST00000527323 KCTD7Q96MP8 289 aa11.86□□□□□ -0.51
CAPN1-208ENST00000527323 TDP1Q9NUW8 608 aa11.86□□□□□ -0.51
CAPN1-208ENST00000527323 ATG13O75143 517 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 IL1AP01583 271 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 XPAP23025 273 aaPredicted RBP11.85□□□□□ -0.51
CAPN1-208ENST00000527323 HLA-FP30511 346 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 INPP1P49441 399 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 TBPL1P62380 186 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 MFSD4BQ5TF39 518 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 LCN1P1Q5VSP4 162 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 FAM92BQ6ZTR7 304 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 C2orf73Q8N5S3 287 aaPredicted RBP11.85□□□□□ -0.51
CAPN1-208ENST00000527323 ATP6V1C2Q8NEY4 427 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 SLC38A5Q8WUX1 472 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 TRMT2BQ96GJ1 504 aaKnown RBP11.85□□□□□ -0.51
CAPN1-208ENST00000527323 NECTIN4Q96NY8 510 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 TEFMQ96QE5 360 aaKnown RBP11.85□□□□□ -0.51
CAPN1-208ENST00000527323 RACGAP1Q9H0H5 632 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 CXorf36Q9H7Y0 433 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 ANKRA2Q9H9E1 313 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 TRPV5Q9NQA5 729 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 SLC25A13Q9UJS0 675 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 HCN2Q9UL51 889 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 PPIL1Q9Y3C6 166 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 DNMT3AQ9Y6K1 912 aaPredicted RBP11.85□□□□□ -0.51
CAPN1-208ENST00000527323 CLCA3PQ9Y6N3 262 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 CCDC88CQ9P219 2028 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 SLC35F4A4IF30 521 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 HEPACAM2A8MVW5 462 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms