RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 CLDN17P56750 224 aa3.33□□□□□ -1.88
CD44-219ENST00000525685 PTENP60484 403 aa3.33□□□□□ -1.88
CD44-219ENST00000525685 CETN1Q12798 172 aa3.33□□□□□ -1.88
CD44-219ENST00000525685 PDIA5Q14554 519 aa3.33□□□□□ -1.88
CD44-219ENST00000525685 NHSL2Q5HYW2 709 aa3.33□□□□□ -1.88
CD44-219ENST00000525685 MPP7Q5T2T1 576 aa3.33□□□□□ -1.88
CD44-219ENST00000525685 CES4AQ5XG92 561 aa3.33□□□□□ -1.88
CD44-219ENST00000525685 TXNRD3NBQ6F5E7 133 aa3.33□□□□□ -1.88
CD44-219ENST00000525685 FAM166AQ6J272 317 aa3.33□□□□□ -1.88
CD44-219ENST00000525685 STXBP4Q6ZWJ1 553 aa3.33□□□□□ -1.88
CD44-219ENST00000525685 TMCO2Q7Z6W1 182 aaPredicted RBP3.33□□□□□ -1.88
CD44-219ENST00000525685 ZER1Q7Z7L7 766 aa3.33□□□□□ -1.88
CD44-219ENST00000525685 PRUNE1Q86TP1 453 aa3.33□□□□□ -1.88
CD44-219ENST00000525685 ZNF410Q86VK4 478 aa3.33□□□□□ -1.88
CD44-219ENST00000525685 TUSC5Q8IXB3 177 aa3.33□□□□□ -1.88
CD44-219ENST00000525685 DCLK2Q8N568 766 aa3.33□□□□□ -1.88
CD44-219ENST00000525685 TMCO5AQ8N6Q1 288 aa3.33□□□□□ -1.88
CD44-219ENST00000525685 NHLRC2Q8NBF2 726 aa3.33□□□□□ -1.88
CD44-219ENST00000525685 TET1Q8NFU7 2136 aa3.33□□□□□ -1.88
CD44-219ENST00000525685 ZNF519Q8TB69 540 aa3.33□□□□□ -1.88
CD44-219ENST00000525685 ZNRF4Q8WWF5 429 aa3.33□□□□□ -1.88
CD44-219ENST00000525685 TCP11Q8WWU5 503 aa3.33□□□□□ -1.88
CD44-219ENST00000525685 TAF15Q92804 592 aaKnown RBP eCLIP3.33□□□□□ -1.88
CD44-219ENST00000525685 DNASE1L2Q92874 299 aa3.33□□□□□ -1.88
CD44-219ENST00000525685 NXPE2Q96DL1 559 aa3.33□□□□□ -1.88
CD44-219ENST00000525685 EPSTI1Q96J88 318 aa3.33□□□□□ -1.88
CD44-219ENST00000525685 PLIN2Q99541 437 aa3.33□□□□□ -1.88
CD44-219ENST00000525685 JPH2Q9BR39 696 aaPredicted RBP3.33□□□□□ -1.88
CD44-219ENST00000525685 MCRIP2Q9BUT9 160 aaKnown RBP3.33□□□□□ -1.88
CD44-219ENST00000525685 TDRD1Q9BXT4 1180 aaKnown RBP3.33□□□□□ -1.88
CD44-219ENST00000525685 GCOM2Q9BZD3 368 aaPredicted RBP3.33□□□□□ -1.88
CD44-219ENST00000525685 CCSER1Q9C0I3 900 aa3.33□□□□□ -1.88
CD44-219ENST00000525685 NT5C3AQ9H0P0 336 aa3.33□□□□□ -1.88
CD44-219ENST00000525685 MTIF3Q9H2K0 278 aaKnown RBP3.33□□□□□ -1.88
CD44-219ENST00000525685 EGLN3Q9H6Z9 239 aa3.33□□□□□ -1.88
CD44-219ENST00000525685 C10orf88Q9H8K7 445 aa3.33□□□□□ -1.88
CD44-219ENST00000525685 C3orf14Q9HBI5 128 aa3.33□□□□□ -1.88
CD44-219ENST00000525685 PANK4Q9NVE7 773 aa3.33□□□□□ -1.88
CD44-219ENST00000525685 VPS18Q9P253 973 aa3.33□□□□□ -1.88
CD44-219ENST00000525685 POMT2Q9UKY4 750 aa3.33□□□□□ -1.88
CD44-219ENST00000525685 PLCL2Q9UPR0 1127 aa3.33□□□□□ -1.88
CD44-219ENST00000525685 CSNK1G3Q9Y6M4 447 aa3.33□□□□□ -1.88
CD44-219ENST00000525685 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.32□□□□□ -1.88
CD44-219ENST00000525685 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.32□□□□□ -1.88
CD44-219ENST00000525685 A0A1W2PR80 420 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 NDUFAF8A1L188 74 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 LRRIQ4A6NIV6 560 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 KPNA7A9QM74 516 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 NPIPA3F8WFD2 350 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 KRT33AO76009 404 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 GJB5O95377 273 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 CA3P07451 260 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 YES1P07947 543 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 ANKRD34CP0C6C1 535 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 MYOGP15173 224 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 PIK3R1P27986 724 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 TNNT3P45378 269 aaPredicted RBP3.32□□□□□ -1.88
CD44-219ENST00000525685 OR3A2P47893 321 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 CLK1P49759 484 aaKnown RBP3.32□□□□□ -1.88
CD44-219ENST00000525685 NUCB2P80303 420 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 CYCSP99999 105 aaKnown RBP3.32□□□□□ -1.88
CD44-219ENST00000525685 DHODHQ02127 395 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 GUCY2DQ02846 1103 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 FOLH1Q04609 750 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 LAMTOR4Q0VGL1 99 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 SCARB2Q14108 478 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 TFDP1Q14186 410 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 FCN2Q15485 313 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 C14orf177Q52M58 125 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.32□□□□□ -1.88
CD44-219ENST00000525685 ATL3Q6DD88 541 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 OR4C11Q6IEV9 310 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 PRSS55Q6UWB4 352 aaPredicted RBP3.32□□□□□ -1.88
CD44-219ENST00000525685 LEKR1Q6ZMV7 388 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 C1orf186Q6ZWK4 172 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 KRT77Q7Z794 578 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 LRRTM1Q86UE6 522 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 GPBP1Q86WP2 473 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 MYOCDQ8IZQ8 938 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 DAW1Q8N136 415 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 RNF149Q8NC42 400 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 KIAA0895Q8NCT3 520 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 NUP37Q8NFH4 326 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 OCC1Q8TAD7 63 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 PHOSPHO2Q8TCD6 241 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 GATAD1Q8WUU5 269 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 SLCO2A1Q92959 643 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 NEDD4LQ96PU5 975 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 KRT12Q99456 494 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 IL12RB2Q99665 862 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 ALKBH7Q9BT30 221 aaPredicted RBP3.32□□□□□ -1.88
CD44-219ENST00000525685 FTHL17Q9BXU8 183 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 NFKBIZQ9BYH8 718 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 COPS7BQ9H9Q2 264 aaPredicted RBP3.32□□□□□ -1.88
CD44-219ENST00000525685 POLD4Q9HCU8 107 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 PHPT1Q9NRX4 125 aaPredicted RBP3.32□□□□□ -1.88
CD44-219ENST00000525685 AGPAT5Q9NUQ2 364 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 EXOC1Q9NV70 894 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 TMEM161AQ9NX61 479 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 TEX10Q9NXF1 929 aaPredicted RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms