RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 TPRA1Q86W33 373 aa4.83□□□□□ -1.64
PABPC1-223ENST00000523636 C12orf56Q8IXR9 622 aa4.83□□□□□ -1.64
PABPC1-223ENST00000523636 IFT20Q8IY31 132 aa4.83□□□□□ -1.64
PABPC1-223ENST00000523636 SYCE1Q8N0S2 351 aa4.83□□□□□ -1.64
PABPC1-223ENST00000523636 CPXM2Q8N436 756 aa4.83□□□□□ -1.64
PABPC1-223ENST00000523636 SETD9Q8NE22 299 aa4.83□□□□□ -1.64
PABPC1-223ENST00000523636 BBS1Q8NFJ9 593 aa4.83□□□□□ -1.64
PABPC1-223ENST00000523636 OR7G3Q8NG95 312 aa4.83□□□□□ -1.64
PABPC1-223ENST00000523636 MYCBPAPQ8TBZ2 947 aa4.83□□□□□ -1.64
PABPC1-223ENST00000523636 SLC22A8Q8TCC7 542 aa4.83□□□□□ -1.64
PABPC1-223ENST00000523636 ELP5Q8TE02 316 aa4.83□□□□□ -1.64
PABPC1-223ENST00000523636 TRPC4APQ8TEL6 797 aa4.83□□□□□ -1.64
PABPC1-223ENST00000523636 LZICQ8WZA0 190 aa4.83□□□□□ -1.64
PABPC1-223ENST00000523636 AZIN2Q96A70 460 aa4.83□□□□□ -1.64
PABPC1-223ENST00000523636 PPP1R14BQ96C90 147 aa4.83□□□□□ -1.64
PABPC1-223ENST00000523636 MYEOVQ96EZ4 313 aa4.83□□□□□ -1.64
PABPC1-223ENST00000523636 THOC1Q96FV9 657 aaKnown RBP4.83□□□□□ -1.64
PABPC1-223ENST00000523636 HMCESQ96FZ2 354 aa4.83□□□□□ -1.64
PABPC1-223ENST00000523636 DCLRE1CQ96SD1 692 aaKnown RBP4.83□□□□□ -1.64
PABPC1-223ENST00000523636 GPR87Q9BY21 358 aa4.83□□□□□ -1.64
PABPC1-223ENST00000523636 FRMD8P1Q9BZ68 369 aaPredicted RBP4.83□□□□□ -1.64
PABPC1-223ENST00000523636 OSBPL8Q9BZF1 889 aa4.83□□□□□ -1.64
PABPC1-223ENST00000523636 RTN4RQ9BZR6 473 aa4.83□□□□□ -1.64
PABPC1-223ENST00000523636 TTYH3Q9C0H2 523 aa4.83□□□□□ -1.64
PABPC1-223ENST00000523636 ZNF350Q9GZX5 532 aa4.83□□□□□ -1.64
PABPC1-223ENST00000523636 P2RY12Q9H244 342 aa4.83□□□□□ -1.64
PABPC1-223ENST00000523636 DPEP3Q9H4B8 488 aa4.83□□□□□ -1.64
PABPC1-223ENST00000523636 GSTO2Q9H4Y5 243 aa4.83□□□□□ -1.64
PABPC1-223ENST00000523636 METTL7AQ9H8H3 244 aa4.83□□□□□ -1.64
PABPC1-223ENST00000523636 GPR35Q9HC97 309 aa4.83□□□□□ -1.64
PABPC1-223ENST00000523636 TUFT1Q9NNX1 390 aa4.83□□□□□ -1.64
PABPC1-223ENST00000523636 FAM207AQ9NSI2 230 aaPredicted RBP4.83□□□□□ -1.64
PABPC1-223ENST00000523636 ARL8BQ9NVJ2 186 aa4.83□□□□□ -1.64
PABPC1-223ENST00000523636 FAM120CQ9NX05 1096 aaKnown RBP4.83□□□□□ -1.64
PABPC1-223ENST00000523636 ARMCX1Q9P291 453 aa4.83□□□□□ -1.64
PABPC1-223ENST00000523636 FBXL17Q9UF56 701 aa4.83□□□□□ -1.64
PABPC1-223ENST00000523636 LSM7Q9UK45 103 aaKnown RBP4.83□□□□□ -1.64
PABPC1-223ENST00000523636 NENFQ9UMX5 172 aa4.83□□□□□ -1.64
PABPC1-223ENST00000523636 SNX12Q9UMY4 172 aa4.83□□□□□ -1.64
PABPC1-223ENST00000523636 REXO2Q9Y3B8 237 aaKnown RBP4.83□□□□□ -1.64
PABPC1-223ENST00000523636 TESMINQ9Y4I5 508 aa4.83□□□□□ -1.64
PABPC1-223ENST00000523636 MPDZO75970 2070 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 PCM1Q15154 2024 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 ANKRD36A6QL64 1941 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 A0A075B6Q4 140 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 A0A087WZY1 265 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 A0A0A6YYC8 382 aaPredicted RBP4.82□□□□□ -1.64
PABPC1-223ENST00000523636 MACROD2A1Z1Q3 448 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 GAGE10A6NGK3 116 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 PRSS29PA6NIE9 313 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 A6NL46 340 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 BTNL10A8MVZ5 291 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 GOLGA8KD6RF30 607 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 I3L1I5 382 aaPredicted RBP4.82□□□□□ -1.64
PABPC1-223ENST00000523636 J3KTA2 159 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 RAB27BO00194 218 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 CES2O00748 559 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 EIF3DO15371 548 aaKnown RBP eCLIP4.82□□□□□ -1.64
PABPC1-223ENST00000523636 SLC16A4O15374 487 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 CLDN3O15551 220 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 HSF2BPO75031 334 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 DNAJB6O75190 326 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 CRTAPO75718 401 aaPredicted RBP4.82□□□□□ -1.64
PABPC1-223ENST00000523636 CBR3O75828 277 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 OR5F1O95221 314 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 ECDO95905 644 aaPredicted RBP4.82□□□□□ -1.64
PABPC1-223ENST00000523636 CLPTM1O96005 669 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 SERPINA3P01011 423 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 GBAP04062 536 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 TRIM49P0CI25 452 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 TRIM49CP0CI26 452 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 KRT3P12035 628 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 PKMP14618 531 aaKnown RBP4.82□□□□□ -1.64
PABPC1-223ENST00000523636 GCSHP23434 173 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 ACRV1P26436 265 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 ACVR2AP27037 513 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 ARL1P40616 181 aaPredicted RBP4.82□□□□□ -1.64
PABPC1-223ENST00000523636 CSKP41240 450 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 CA7P43166 264 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 GPD2P43304 727 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 GABRB2P47870 512 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 PCP4P48539 62 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 FNTAP49354 379 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 STK19P49842 368 aaPredicted RBP4.82□□□□□ -1.64
PABPC1-223ENST00000523636 SMSP52788 366 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 EIF3BP55884 814 aaKnown RBP4.82□□□□□ -1.64
PABPC1-223ENST00000523636 ST8SIA6P61647 398 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 UFM1P61960 85 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 VSNL1P62760 191 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 TNNC1P63316 161 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 CYLC2Q14093 348 aaPredicted RBP4.82□□□□□ -1.64
PABPC1-223ENST00000523636 NR1D2Q14995 579 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 LARS2Q15031 903 aaKnown RBP4.82□□□□□ -1.64
PABPC1-223ENST00000523636 KNOP1Q1ED39 458 aaKnown RBP4.82□□□□□ -1.64
PABPC1-223ENST00000523636 ASTE1Q2TB18 679 aaPredicted RBP4.82□□□□□ -1.64
PABPC1-223ENST00000523636 AMZ1Q400G9 498 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 PLA1AQ53H76 456 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 SGO1Q5FBB7 561 aa4.82□□□□□ -1.64
PABPC1-223ENST00000523636 UBAP2Q5T6F2 1119 aaKnown RBP4.82□□□□□ -1.64
PABPC1-223ENST00000523636 NKAIN2Q5VXU1 208 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms