RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 NCLNQ969V3 563 aa6.97□□□□□ -1.29
NR1I3-231ENST00000512340 ANKRD9Q96BM1 317 aaPredicted RBP6.97□□□□□ -1.29
NR1I3-231ENST00000512340 DOCK10Q96BY6 2186 aa6.97□□□□□ -1.29
NR1I3-231ENST00000512340 TM4SF18Q96CE8 201 aa6.97□□□□□ -1.29
NR1I3-231ENST00000512340 MTERF3Q96E29 417 aa6.97□□□□□ -1.29
NR1I3-231ENST00000512340 C19orf60Q96EN9 201 aa6.97□□□□□ -1.29
NR1I3-231ENST00000512340 ZBED6CLQ96FA7 236 aaPredicted RBP6.97□□□□□ -1.29
NR1I3-231ENST00000512340 APIPQ96GX9 242 aa6.97□□□□□ -1.29
NR1I3-231ENST00000512340 SENP5Q96HI0 755 aaPredicted RBP6.97□□□□□ -1.29
NR1I3-231ENST00000512340 FBXL20Q96IG2 436 aa6.97□□□□□ -1.29
NR1I3-231ENST00000512340 KCNA7Q96RP8 456 aa6.97□□□□□ -1.29
NR1I3-231ENST00000512340 ZNF717Q9BY31 904 aaPredicted RBP6.97□□□□□ -1.29
NR1I3-231ENST00000512340 FAM107BQ9H098 131 aa6.97□□□□□ -1.29
NR1I3-231ENST00000512340 MYNNQ9NPC7 610 aa6.97□□□□□ -1.29
NR1I3-231ENST00000512340 INTS9Q9NV88 658 aaKnown RBP6.97□□□□□ -1.29
NR1I3-231ENST00000512340 NOP53Q9NZM5 478 aaKnown RBP6.97□□□□□ -1.29
NR1I3-231ENST00000512340 PRODH2Q9UF12 536 aa6.97□□□□□ -1.29
NR1I3-231ENST00000512340 ERVK-11Q9UQG0 969 aa6.97□□□□□ -1.29
NR1I3-231ENST00000512340 A0A1B0GTL3 188 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 OR2W5A6NFC9 320 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 GABRR3A8MPY1 467 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 A8MVJ9 347 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 PIP5K1BO14986 540 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 HDAC3O15379 428 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 PRAMEF2O60811 474 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 DNAJB6O75190 326 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 PEX11AO75192 247 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 SKAP2O75563 359 aaPredicted RBP6.96□□□□□ -1.3
NR1I3-231ENST00000512340 SOX30O94993 753 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 CRYABP02511 175 aaKnown RBP6.96□□□□□ -1.3
NR1I3-231ENST00000512340 ATP1B1P05026 303 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 CCDC159P0C7I6 412 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 BGNP21810 368 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 SOX11P35716 441 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 KRT20P35900 424 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 HNRNPFP52597 415 aaKnown RBP6.96□□□□□ -1.3
NR1I3-231ENST00000512340 FOXA1P55317 472 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 DCAF7P61962 342 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 SNRPNP63162 240 aaKnown RBP6.96□□□□□ -1.3
NR1I3-231ENST00000512340 RPL38P63173 70 aaKnown RBP6.96□□□□□ -1.3
NR1I3-231ENST00000512340 MRPS22P82650 360 aaKnown RBP6.96□□□□□ -1.3
NR1I3-231ENST00000512340 ID2Q02363 134 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 SRSF11Q05519 484 aaKnown RBP6.96□□□□□ -1.3
NR1I3-231ENST00000512340 ELOAQ14241 798 aaKnown RBP6.96□□□□□ -1.3
NR1I3-231ENST00000512340 ZNHIT3Q15649 155 aaPredicted RBP6.96□□□□□ -1.3
NR1I3-231ENST00000512340 SPRED3Q2MJR0 410 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 FAM180AQ6UWF9 173 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 IGFL2Q6UWQ7 119 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 CCDC80Q76M96 950 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 PACS2Q86VP3 889 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 PTRH1Q86Y79 214 aaKnown RBP6.96□□□□□ -1.3
NR1I3-231ENST00000512340 OR4N5Q8IXE1 308 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 VWA5B2Q8N398 1253 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 NUBPLQ8TB37 319 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 PTPMT1Q8WUK0 201 aaPredicted RBP6.96□□□□□ -1.3
NR1I3-231ENST00000512340 EXOSC8Q96B26 276 aaKnown RBP6.96□□□□□ -1.3
NR1I3-231ENST00000512340 PPCDCQ96CD2 204 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 SGCZQ96LD1 299 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 ZBTB18Q99592 522 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 SH3GL2Q99962 352 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 EBPLQ9BY08 206 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 BRINP2Q9C0B6 783 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 SEMA4CQ9C0C4 833 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 CDCP1Q9H5V8 836 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 C3orf14Q9HBI5 128 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 HHATLQ9HCP6 504 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 TIMMDC1Q9NPL8 285 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 SLC35C2Q9NQQ7 365 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 HPF1Q9NWY4 346 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 TEX10Q9NXF1 929 aaPredicted RBP6.96□□□□□ -1.3
NR1I3-231ENST00000512340 TAS2R9Q9NYW1 312 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 TAS2R7Q9NYW3 318 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 BCAP29Q9UHQ4 241 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 MRTO4Q9UKD2 239 aaKnown RBP6.96□□□□□ -1.3
NR1I3-231ENST00000512340 PCDHGB4Q9UN71 923 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 KLF13Q9Y2Y9 288 aaPredicted RBP6.96□□□□□ -1.3
NR1I3-231ENST00000512340 POLR3HQ9Y535 204 aaPredicted RBP6.96□□□□□ -1.3
NR1I3-231ENST00000512340 PCDHGB6Q9Y5F9 930 aa6.96□□□□□ -1.3
NR1I3-231ENST00000512340 NBASA2RRP1 2371 aa6.95□□□□□ -1.3
NR1I3-231ENST00000512340 UBR5O95071 2799 aaPredicted RBP6.95□□□□□ -1.3
NR1I3-231ENST00000512340 C2orf92A0A1B0GVN3 265 aa6.95□□□□□ -1.3
NR1I3-231ENST00000512340 KLRC4-KLRK1H3BQV0 150 aa6.95□□□□□ -1.3
NR1I3-231ENST00000512340 TP53I11O14683 189 aa6.95□□□□□ -1.3
NR1I3-231ENST00000512340 LSM1O15116 133 aaKnown RBP6.95□□□□□ -1.3
NR1I3-231ENST00000512340 PGRMC2O15173 223 aa6.95□□□□□ -1.3
NR1I3-231ENST00000512340 PDPK1O15530 556 aa6.95□□□□□ -1.3
NR1I3-231ENST00000512340 SUV39H1O43463 412 aa6.95□□□□□ -1.3
NR1I3-231ENST00000512340 E2F6O75461 281 aa6.95□□□□□ -1.3
NR1I3-231ENST00000512340 ITGA10O75578 1167 aa6.95□□□□□ -1.3
NR1I3-231ENST00000512340 WDPCPO95876 746 aa6.95□□□□□ -1.3
NR1I3-231ENST00000512340 CHN1P15882 459 aa6.95□□□□□ -1.3
NR1I3-231ENST00000512340 LBPP18428 481 aa6.95□□□□□ -1.3
NR1I3-231ENST00000512340 NR1D1P20393 614 aa6.95□□□□□ -1.3
NR1I3-231ENST00000512340 PRPS1L1P21108 318 aa6.95□□□□□ -1.3
NR1I3-231ENST00000512340 GPC1P35052 558 aa6.95□□□□□ -1.3
NR1I3-231ENST00000512340 FEN1P39748 380 aaKnown RBP6.95□□□□□ -1.3
NR1I3-231ENST00000512340 HLCSP50747 726 aa6.95□□□□□ -1.3
NR1I3-231ENST00000512340 NCBP2P52298 156 aaKnown RBP eCLIP6.95□□□□□ -1.3
NR1I3-231ENST00000512340 CLNS1AP54105 237 aaKnown RBP6.95□□□□□ -1.3
NR1I3-231ENST00000512340 MANFP55145 182 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms