RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 NIPAL3Q6P499 406 aa10.38□□□□□ -0.75
CPNE4-209ENST00000512055 C1orf52Q8N6N3 182 aaKnown RBP10.38□□□□□ -0.75
CPNE4-209ENST00000512055 ARRDC2Q8TBH0 407 aa10.38□□□□□ -0.75
CPNE4-209ENST00000512055 SNAPC3Q92966 411 aa10.38□□□□□ -0.75
CPNE4-209ENST00000512055 FUBP1Q96AE4 644 aaKnown RBP10.38□□□□□ -0.75
CPNE4-209ENST00000512055 NUS1Q96E22 293 aa10.38□□□□□ -0.75
CPNE4-209ENST00000512055 SULT4A1Q9BR01 284 aa10.38□□□□□ -0.75
CPNE4-209ENST00000512055 ASH2LQ9UBL3 628 aa10.38□□□□□ -0.75
CPNE4-209ENST00000512055 PCDHGB6Q9Y5F9 930 aa10.38□□□□□ -0.75
CPNE4-209ENST00000512055 LOXHD1Q8IVV2 1947 aa10.38□□□□□ -0.75
CPNE4-209ENST00000512055 NUP205Q92621 2012 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 H0Y8G0 127 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 CLIC3O95833 236 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 RD3LP0DJH9 198 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 HTR1BP28222 390 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 VEGFBP49765 207 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 PRKXP51817 358 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 FOXA1P55317 472 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 HSPB3Q12988 150 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 SEMA3BQ13214 749 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 SLBPQ14493 270 aaKnown RBP eCLIP10.37□□□□□ -0.75
CPNE4-209ENST00000512055 PTPRRQ15256 657 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 VAMP3Q15836 100 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 PGM2L1Q6PCE3 622 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 VITQ6UXI7 678 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 RTN4RL1Q86UN2 441 aaPredicted RBP10.37□□□□□ -0.75
CPNE4-209ENST00000512055 SCML4Q8N228 414 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 MDGA1Q8NFP4 955 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 ZNF419Q96HQ0 510 aaPredicted RBP10.37□□□□□ -0.75
CPNE4-209ENST00000512055 HIST1H2AAQ96QV6 131 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 ZNF382Q96SR6 550 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 ZNF416Q9BWM5 594 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 BRINP2Q9C0B6 783 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 ZDHHC4Q9NPG8 344 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 SBF2Q86WG5 1849 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 MYOCOSA0A1B0GUC4 107 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 LRRN3E7EW58 273 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 H3BNH8 94 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 SOCS5O75159 536 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 CD6P30203 668 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 HIST2H3PS2Q5TEC6 136 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 PAMR1Q6UXH9 720 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 TMEM173Q86WV6 379 aaPredicted RBP10.37□□□□□ -0.75
CPNE4-209ENST00000512055 TMEM25Q86YD3 366 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 RGL4Q8IZJ4 473 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 C12orf76Q8N812 135 aaPredicted RBP10.37□□□□□ -0.75
CPNE4-209ENST00000512055 ADAMTS15Q8TE58 950 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 BSCL2Q96G97 398 aaPredicted RBP10.37□□□□□ -0.75
CPNE4-209ENST00000512055 SLC39A13Q96H72 371 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 VRK1Q99986 396 aaPredicted RBP10.37□□□□□ -0.75
CPNE4-209ENST00000512055 LRRN3Q9H3W5 708 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 RNF6Q9Y252 685 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 IFT52Q9Y366 437 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 ARFGEF1Q9Y6D6 1849 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 H3BSH0 61 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 PCDH7O60245 1069 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 RPL10P27635 214 aaKnown RBP10.37□□□□□ -0.75
CPNE4-209ENST00000512055 AGTR1P30556 359 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 EMX2Q04743 252 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 DBPQ10586 325 aaPredicted RBP10.37□□□□□ -0.75
CPNE4-209ENST00000512055 SNTA1Q13424 505 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 GPM6BQ13491 265 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 ATAT1Q5SQI0 421 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 C9orf64Q5T6V5 341 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 NADSYN1Q6IA69 706 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 PDE12Q6L8Q7 609 aaKnown RBP10.37□□□□□ -0.75
CPNE4-209ENST00000512055 ARHGAP11AQ6P4F7 1023 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 AMZ2Q86W34 360 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 THOC6Q86W42 341 aaKnown RBP10.37□□□□□ -0.75
CPNE4-209ENST00000512055 GAS2L1Q99501 681 aaPredicted RBP10.37□□□□□ -0.75
CPNE4-209ENST00000512055 GULP1Q9UBP9 304 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 PCDHGA6Q9Y5G7 932 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 BRWD3Q6RI45 1802 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 MCM3APO60318 1980 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 FUOMA2VDF0 154 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 DRGXA6NNA5 263 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 EEF1E1-BLOC1S5C9J1V9 151 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 EEF1E1O43324 174 aaKnown RBP10.37□□□□□ -0.75
CPNE4-209ENST00000512055 CREBL2O60519 120 aaPredicted RBP10.37□□□□□ -0.75
CPNE4-209ENST00000512055 BCKDHAP12694 445 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 GNRHRP30968 328 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 SLC26A5P58743 744 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 DSC1Q08554 894 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 NANOGP8Q6NSW7 305 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 ZNF783Q6ZMS7 281 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 PARGQ86W56 976 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 ARL14Q8N4G2 192 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 DNASE1L2Q92874 299 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 BIRC7Q96CA5 298 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 ISOC1Q96CN7 298 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 S100A16Q96FQ6 103 aaKnown RBP10.37□□□□□ -0.75
CPNE4-209ENST00000512055 SLC6A7Q99884 636 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 NANOGQ9H9S0 305 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 EXTL2Q9UBQ6 330 aa10.37□□□□□ -0.75
CPNE4-209ENST00000512055 WASH4PA8MWX3 477 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 CLIC1O00299 241 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 GADD45GO95257 159 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 SNAPINO95295 136 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 BPIP17213 487 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 ACRV1P26436 265 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms