RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 TUBA8Q9NY65 449 aaPredicted RBP13.67□□□□□ -0.22
UBE2D3-228ENST00000508974 TNFRSF10DQ9UBN6 386 aa13.67□□□□□ -0.22
UBE2D3-228ENST00000508974 ADAM29Q9UKF5 820 aa13.67□□□□□ -0.22
UBE2D3-228ENST00000508974 EMCNQ9ULC0 261 aa13.67□□□□□ -0.22
UBE2D3-228ENST00000508974 TIMM22Q9Y584 194 aa13.67□□□□□ -0.22
UBE2D3-228ENST00000508974 LIPGQ9Y5X9 500 aa13.67□□□□□ -0.22
UBE2D3-228ENST00000508974 C2orf92A0A1B0GVN3 265 aa13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 ESRRBO95718 433 aa13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 KRT6AP02538 564 aa13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 KRT6BP04259 564 aa13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 GSTA1P08263 222 aa13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 CELA3AP09093 270 aa13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 KRT15P19012 456 aa13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 HTR1EP28566 365 aa13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 DEKP35659 375 aaKnown RBP13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 FEN1P39748 380 aaKnown RBP13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 KRT6CP48668 564 aa13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 SMSP52788 366 aa13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 KCNJ2P63252 427 aa13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 BTKQ06187 659 aa13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 ZNF791Q3KP31 576 aaPredicted RBP13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 C10orf62Q5T681 223 aaPredicted RBP13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 HLA-DQA1Q5Y7H0 255 aa13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 LYPD8Q6UX82 237 aa13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 BNC2Q6ZN30 1099 aaPredicted RBP13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 LCA5Q86VQ0 697 aa13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 SLC22A16Q86VW1 577 aa13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 SLC22A9Q8IVM8 553 aa13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 PRR22Q8IZ63 422 aa13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 MYRIPQ8NFW9 859 aa13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 ACMSDQ8TDX5 336 aa13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 EPS8L3Q8TE67 593 aaKnown RBP13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 KLHL29Q96CT2 875 aa13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 SPACA9Q96E40 222 aaPredicted RBP13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 JSRP1Q96MG2 331 aaPredicted RBP13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 ZNF382Q96SR6 550 aa13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 BRINP2Q9C0B6 783 aa13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 C12orf65Q9H3J6 166 aaKnown RBP13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 CXorf21Q9HAI6 301 aa13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 BRF2Q9HAW0 419 aa13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 VPS29Q9UBQ0 182 aa13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 FETUBQ9UGM5 382 aa13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 PCDHA9Q9Y5H5 950 aa13.66□□□□□ -0.22
UBE2D3-228ENST00000508974 ATP6AP2A0A1C7CYW4 349 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 C1orf226A1L170 272 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 NPIPA2E9PIF3 369 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 NPIPA3F8WFD2 350 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 ADAM10O14672 748 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 GLRA3O75311 464 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 ATP6AP2O75787 350 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 MYL2P10916 166 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 CPMP14384 443 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 PORP16435 677 aaPredicted RBP13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 PRKAA2P54646 552 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 HMGCS1Q01581 520 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 DUSP2Q05923 314 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 LCP2Q13094 533 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 ART3Q13508 389 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 EXOSC7Q15024 291 aaKnown RBP13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 NNATQ16517 81 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 SLC22A10Q63ZE4 541 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 SLC48A1Q6P1K1 146 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 ARHGAP11AQ6P4F7 1023 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 FAM111BQ6SJ93 734 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 TMEM251Q8N6I4 163 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 ADCY4Q8NFM4 1077 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 OR10G3Q8NGC4 313 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 OR5M9Q8NGP3 310 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 TM4SF18Q96CE8 201 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 L3HYPDHQ96EM0 354 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 SGCZQ96LD1 299 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 EBPLQ9BY08 206 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 ACPTQ9BZG2 426 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 OR10A5Q9H207 317 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 GSTO2Q9H4Y5 243 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 MID1IP1Q9NPA3 183 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 PFDN4Q9NQP4 134 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 NMRK1Q9NWW6 199 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 DCDC2Q9UHG0 476 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 ENTPD4Q9Y227 616 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 HRH3Q9Y5N1 445 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 NINQ8N4C6 2090 aa13.65□□□□□ -0.22
UBE2D3-228ENST00000508974 DNAJC13O75165 2243 aa13.64□□□□□ -0.23
UBE2D3-228ENST00000508974 CACNA1CQ13936 2221 aa13.64□□□□□ -0.23
UBE2D3-228ENST00000508974 GNG14A0A1W2PPG7 69 aa13.64□□□□□ -0.23
UBE2D3-228ENST00000508974 GOLGA6L10A6NI86 522 aa13.64□□□□□ -0.23
UBE2D3-228ENST00000508974 OR6C76A6NM76 312 aa13.64□□□□□ -0.23
UBE2D3-228ENST00000508974 G3V2L1 256 aa13.64□□□□□ -0.23
UBE2D3-228ENST00000508974 PCDH7O60245 1069 aa13.64□□□□□ -0.23
UBE2D3-228ENST00000508974 GUCY1B2O75343 617 aa13.64□□□□□ -0.23
UBE2D3-228ENST00000508974 ULK1O75385 1050 aa13.64□□□□□ -0.23
UBE2D3-228ENST00000508974 GLSO94925 669 aaPredicted RBP13.64□□□□□ -0.23
UBE2D3-228ENST00000508974 NUDT7P0C024 238 aa13.64□□□□□ -0.23
UBE2D3-228ENST00000508974 FBXO45P0C2W1 286 aa13.64□□□□□ -0.23
UBE2D3-228ENST00000508974 GALNSP34059 522 aa13.64□□□□□ -0.23
UBE2D3-228ENST00000508974 FOXA1P55317 472 aa13.64□□□□□ -0.23
UBE2D3-228ENST00000508974 FBXW4P57775 412 aa13.64□□□□□ -0.23
UBE2D3-228ENST00000508974 CSTF3Q12996 717 aaKnown RBP13.64□□□□□ -0.23
UBE2D3-228ENST00000508974 LTB4RQ15722 352 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms