RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 CDKL1Q00532 357 aa2.16□□□□□ -2.06
GYPB-207ENST00000506679 RUNX3Q13761 415 aa2.16□□□□□ -2.06
GYPB-207ENST00000506679 EXOSC7Q15024 291 aaKnown RBP2.16□□□□□ -2.06
GYPB-207ENST00000506679 LTB4RQ15722 352 aa2.16□□□□□ -2.06
GYPB-207ENST00000506679 ATAD3CQ5T2N8 411 aa2.16□□□□□ -2.06
GYPB-207ENST00000506679 NKAIN2Q5VXU1 208 aa2.16□□□□□ -2.06
GYPB-207ENST00000506679 STEAP1BQ6NZ63 245 aa2.16□□□□□ -2.06
GYPB-207ENST00000506679 CDC42EP5Q6NZY7 148 aa2.16□□□□□ -2.06
GYPB-207ENST00000506679 PAMR1Q6UXH9 720 aa2.16□□□□□ -2.06
GYPB-207ENST00000506679 MOB2Q70IA6 237 aa2.16□□□□□ -2.06
GYPB-207ENST00000506679 SH2D6Q7Z4S9 175 aa2.16□□□□□ -2.06
GYPB-207ENST00000506679 ZNF410Q86VK4 478 aa2.16□□□□□ -2.06
GYPB-207ENST00000506679 CNTN4Q8IWV2 1026 aa2.16□□□□□ -2.06
GYPB-207ENST00000506679 GPD1LQ8N335 351 aa2.16□□□□□ -2.06
GYPB-207ENST00000506679 CHCHD4Q8N4Q1 142 aa2.16□□□□□ -2.06
GYPB-207ENST00000506679 RELL2Q8NC24 303 aaPredicted RBP2.16□□□□□ -2.06
GYPB-207ENST00000506679 OR4A16Q8NH70 328 aa2.16□□□□□ -2.06
GYPB-207ENST00000506679 RDH11Q8TC12 318 aa2.16□□□□□ -2.06
GYPB-207ENST00000506679 FBXO25Q8TCJ0 367 aa2.16□□□□□ -2.06
GYPB-207ENST00000506679 SLCO4A1Q96BD0 722 aa2.16□□□□□ -2.06
GYPB-207ENST00000506679 RAB39BQ96DA2 213 aa2.16□□□□□ -2.06
GYPB-207ENST00000506679 RPGRIP1Q96KN7 1286 aa2.16□□□□□ -2.06
GYPB-207ENST00000506679 FUNDC2Q9BWH2 189 aa2.16□□□□□ -2.06
GYPB-207ENST00000506679 IL1RL2Q9HB29 575 aa2.16□□□□□ -2.06
GYPB-207ENST00000506679 KCNMB3Q9NPA1 279 aa2.16□□□□□ -2.06
GYPB-207ENST00000506679 ZCCHC3Q9NUD5 404 aaKnown RBP2.16□□□□□ -2.06
GYPB-207ENST00000506679 PIGVQ9NUD9 493 aa2.16□□□□□ -2.06
GYPB-207ENST00000506679 CYP39A1Q9NYL5 469 aa2.16□□□□□ -2.06
GYPB-207ENST00000506679 ARMCX1Q9P291 453 aa2.16□□□□□ -2.06
GYPB-207ENST00000506679 TUBGCP4Q9UGJ1 667 aa2.16□□□□□ -2.06
GYPB-207ENST00000506679 NARFQ9UHQ1 456 aa2.16□□□□□ -2.06
GYPB-207ENST00000506679 RNF24Q9Y225 148 aa2.16□□□□□ -2.06
GYPB-207ENST00000506679 NAALAD2Q9Y3Q0 740 aa2.16□□□□□ -2.06
GYPB-207ENST00000506679 ZNF646O15015 1829 aaPredicted RBP2.16□□□□□ -2.06
GYPB-207ENST00000506679 PTPRUQ92729 1446 aa2.16□□□□□ -2.06
GYPB-207ENST00000506679 ATRXP46100 2492 aa2.15□□□□□ -2.06
GYPB-207ENST00000506679 NPC1L1Q9UHC9 1359 aa2.15□□□□□ -2.07
GYPB-207ENST00000506679 TRAV9-2A0A087WT02 112 aa2.15□□□□□ -2.07
GYPB-207ENST00000506679 CHEK1O14757 476 aa2.15□□□□□ -2.07
GYPB-207ENST00000506679 SRPX2O60687 465 aaPredicted RBP2.15□□□□□ -2.07
GYPB-207ENST00000506679 TSC22D2O75157 780 aa2.15□□□□□ -2.07
GYPB-207ENST00000506679 REC8O95072 547 aa2.15□□□□□ -2.07
GYPB-207ENST00000506679 OAS1P00973 400 aaKnown RBP2.15□□□□□ -2.07
GYPB-207ENST00000506679 IGKV3-15P01624 115 aa2.15□□□□□ -2.07
GYPB-207ENST00000506679 IGHV3-9P01782 118 aa2.15□□□□□ -2.07
GYPB-207ENST00000506679 PIGRP01833 764 aa2.15□□□□□ -2.07
GYPB-207ENST00000506679 GIG44P09565 113 aaPredicted RBP2.15□□□□□ -2.07
GYPB-207ENST00000506679 IGFBP5P24593 272 aa2.15□□□□□ -2.07
GYPB-207ENST00000506679 TRIM23P36406 574 aa2.15□□□□□ -2.07
GYPB-207ENST00000506679 NPRL3Q12980 569 aa2.15□□□□□ -2.07
GYPB-207ENST00000506679 TSTA3Q13630 321 aaPredicted RBP2.15□□□□□ -2.07
GYPB-207ENST00000506679 HFEQ30201 348 aa2.15□□□□□ -2.07
GYPB-207ENST00000506679 C14orf28Q4W4Y0 310 aa2.15□□□□□ -2.07
GYPB-207ENST00000506679 PRR30Q53SZ7 412 aaPredicted RBP2.15□□□□□ -2.07
GYPB-207ENST00000506679 SLC10A5Q5PT55 438 aa2.15□□□□□ -2.07
GYPB-207ENST00000506679 RTL6Q6ICC9 239 aa2.15□□□□□ -2.07
GYPB-207ENST00000506679 ABRAXAS1Q6UWZ7 409 aa2.15□□□□□ -2.07
GYPB-207ENST00000506679 CCDC91Q7Z6B0 441 aa2.15□□□□□ -2.07
GYPB-207ENST00000506679 KLHL30-AS1Q8NEE0 82 aa2.15□□□□□ -2.07
GYPB-207ENST00000506679 RHOXF1Q8NHV9 184 aa2.15□□□□□ -2.07
GYPB-207ENST00000506679 MCCC1Q96RQ3 725 aaPredicted RBP2.15□□□□□ -2.07
GYPB-207ENST00000506679 FAM213AQ9BRX8 229 aa2.15□□□□□ -2.07
GYPB-207ENST00000506679 MID1IP1Q9NPA3 183 aa2.15□□□□□ -2.07
GYPB-207ENST00000506679 TNFRSF19Q9NS68 423 aa2.15□□□□□ -2.07
GYPB-207ENST00000506679 ABCC13Q9NSE7 274 aa2.15□□□□□ -2.07
GYPB-207ENST00000506679 STARD5Q9NSY2 213 aa2.15□□□□□ -2.07
GYPB-207ENST00000506679 COMMD8Q9NX08 183 aa2.15□□□□□ -2.07
GYPB-207ENST00000506679 CWC25Q9NXE8 425 aaPredicted RBP2.15□□□□□ -2.07
GYPB-207ENST00000506679 SENP1Q9P0U3 644 aa2.15□□□□□ -2.07
GYPB-207ENST00000506679 RCOR3Q9P2K3 495 aaPredicted RBP2.15□□□□□ -2.07
GYPB-207ENST00000506679 EIF3KQ9UBQ5 218 aaKnown RBP2.15□□□□□ -2.07
GYPB-207ENST00000506679 EMCNQ9ULC0 261 aa2.15□□□□□ -2.07
GYPB-207ENST00000506679 RPH3AQ9Y2J0 694 aaPredicted RBP2.15□□□□□ -2.07
GYPB-207ENST00000506679 SNX5Q9Y5X3 404 aa2.15□□□□□ -2.07
GYPB-207ENST00000506679 TEX264Q9Y6I9 313 aa2.15□□□□□ -2.07
GYPB-207ENST00000506679 FAM168BA1KXE4 195 aa2.14□□□□□ -2.07
GYPB-207ENST00000506679 ZSCAN5CA6NGD5 496 aaPredicted RBP2.14□□□□□ -2.07
GYPB-207ENST00000506679 A8MU10 97 aa2.14□□□□□ -2.07
GYPB-207ENST00000506679 SH2D1BO14796 132 aa2.14□□□□□ -2.07
GYPB-207ENST00000506679 LRP3O75074 770 aa2.14□□□□□ -2.07
GYPB-207ENST00000506679 OLFM2O95897 454 aa2.14□□□□□ -2.07
GYPB-207ENST00000506679 APRTP07741 180 aa2.14□□□□□ -2.07
GYPB-207ENST00000506679 SNRPCP09234 159 aaKnown RBP2.14□□□□□ -2.07
GYPB-207ENST00000506679 MBL2P11226 248 aaPredicted RBP2.14□□□□□ -2.07
GYPB-207ENST00000506679 P4HA1P13674 534 aa2.14□□□□□ -2.07
GYPB-207ENST00000506679 FERP16591 822 aa2.14□□□□□ -2.07
GYPB-207ENST00000506679 FASP25445 335 aa2.14□□□□□ -2.07
GYPB-207ENST00000506679 UCP1P25874 307 aa2.14□□□□□ -2.07
GYPB-207ENST00000506679 PPP2R1BP30154 601 aa2.14□□□□□ -2.07
GYPB-207ENST00000506679 NSFP46459 744 aaKnown RBP2.14□□□□□ -2.07
GYPB-207ENST00000506679 BRCC3P46736 316 aa2.14□□□□□ -2.07
GYPB-207ENST00000506679 RPS4XP62701 263 aaKnown RBP2.14□□□□□ -2.07
GYPB-207ENST00000506679 TRA2BP62995 288 aaKnown RBP2.14□□□□□ -2.07
GYPB-207ENST00000506679 ACTN3Q08043 901 aaPredicted RBP2.14□□□□□ -2.07
GYPB-207ENST00000506679 ABRAXAS2Q15018 415 aa2.14□□□□□ -2.07
GYPB-207ENST00000506679 KRT31Q15323 416 aa2.14□□□□□ -2.07
GYPB-207ENST00000506679 TGIF1Q15583 401 aa2.14□□□□□ -2.07
GYPB-207ENST00000506679 C2orf76Q3KRA6 126 aa2.14□□□□□ -2.07
GYPB-207ENST00000506679 TIMM50Q3ZCQ8 353 aa2.14□□□□□ -2.07
GYPB-207ENST00000506679 RNF212Q495C1 297 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms