RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 MAGEA2P43356 314 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 ZFP36L2P47974 494 aaKnown RBP1.34□□□□□ -2.19
XRN1-214ENST00000498077 CORO7P57737 925 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 RACK1P63244 317 aaKnown RBP1.34□□□□□ -2.19
XRN1-214ENST00000498077 CX3CL1P78423 397 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 PRR5P85299 388 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 TFF2Q03403 129 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 FGL1Q08830 312 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 GTF2H3Q13889 308 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 MSMPQ1L6U9 139 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 TIMM50Q3ZCQ8 353 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 SLC36A2Q495M3 483 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 KLHL26Q53HC5 615 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 DCST2Q5T1A1 773 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 KRT79Q5XKE5 535 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 C11orf63Q6NUN7 778 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 CASC4Q6P4E1 433 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 ABHD17CQ6PCB6 329 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 Q6ZSR6 202 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 RHOUQ7L0Q8 258 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 LINGO2Q7L985 606 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 ARCQ7LC44 396 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 KCNMB4Q86W47 210 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 TMEM126BQ8IUX1 230 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 CCAR2Q8N163 923 aaKnown RBP1.34□□□□□ -2.19
XRN1-214ENST00000498077 METTL4Q8N3J2 472 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 MREGQ8N565 214 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 TMEM229BQ8NBD8 167 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 AQP11Q8NBQ7 271 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 OR4S2Q8NH73 311 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 TTLL11Q8NHH1 800 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 SLC7A13Q8TCU3 470 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 C2CD4CQ8TF44 421 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 GEMIN6Q8WXD5 167 aaKnown RBP1.34□□□□□ -2.19
XRN1-214ENST00000498077 RPRD1AQ96P16 312 aaPredicted RBP1.34□□□□□ -2.19
XRN1-214ENST00000498077 CPNE1Q99829 537 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 FAM110AQ9BQ89 295 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 LRRC1Q9BTT6 524 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 SLC5A7Q9GZV3 580 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 RNF32Q9H0A6 362 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 NAPBQ9H115 298 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 KLK15Q9H2R5 256 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 ASB8Q9H765 288 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 PHAXQ9H814 394 aaKnown RBP1.34□□□□□ -2.19
XRN1-214ENST00000498077 MRPL40Q9NQ50 206 aaKnown RBP1.34□□□□□ -2.19
XRN1-214ENST00000498077 COPRSQ9NQ92 184 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 PRSS16Q9NQE7 514 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 CHST7Q9NS84 486 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 GAR1Q9NY12 217 aaKnown RBP1.34□□□□□ -2.19
XRN1-214ENST00000498077 TAS2R5Q9NYW4 299 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 PLAAQ9Y263 795 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 ZNF257Q9Y2Q1 563 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 TSC22D4Q9Y3Q8 395 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 NEU2Q9Y3R4 380 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 IVNS1ABPQ9Y6Y0 642 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 PRR14LQ5THK1 2151 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 COL4A1P02462 1669 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 NBEAL1Q6ZS30 2694 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 TRAV18A0A075B6X5 111 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 A0A0B4J2C4 111 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 TRBV4-1A0A0J9YWV2 114 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 GOLGA6L10A0A0M3HER8 536 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 A0A1B0GU03 582 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 C17orf113A0A1B0GUU1 675 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 TTC36A6NLP5 189 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 COLCA2A8K830 154 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 E7ESA3 106 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 DNALI1O14645 258 aaPredicted RBP1.34□□□□□ -2.2
XRN1-214ENST00000498077 PRODHO43272 600 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 TRAPPC3O43617 180 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 DLX3O60479 287 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 SELENOFO60613 162 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 ZNF354AO60765 605 aaPredicted RBP1.34□□□□□ -2.2
XRN1-214ENST00000498077 CAND2O75155 1236 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 CIB2O75838 187 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 AK1P00568 194 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 HLA-DRAP01903 254 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 HLA-DPB1P04440 258 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 RPN1P04843 607 aaKnown RBP1.34□□□□□ -2.2
XRN1-214ENST00000498077 ALDOBP05062 364 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 GSTA2P09210 222 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 CCDC172P0C7W6 258 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 TMEM225BP0DP42 221 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 PSG1P11464 419 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 MMP11P24347 488 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 CD40LGP29965 261 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 GALNSP34059 522 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 CTNNB1P35222 781 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 IL6STP40189 918 aaPredicted RBP1.34□□□□□ -2.2
XRN1-214ENST00000498077 PPP1R2P41236 205 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 ZNF83P51522 516 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 TPTEP56180 551 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 RAB4BP61018 213 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 SLC34A1Q06495 639 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 PDE7AQ13946 482 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 UBXN2BQ14CS0 331 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 PPP2R5AQ15172 486 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 SEC23BQ15437 767 aa1.34□□□□□ -2.2
XRN1-214ENST00000498077 EEF1AKMT2Q5JPI9 291 aaKnown RBP1.34□□□□□ -2.2
XRN1-214ENST00000498077 CCSAPQ6IQ19 270 aaPredicted RBP1.34□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms