RNA–Protein interactions for RNA: ENST00000495705.5

LMO4-204, Transcript of LIM domain only 4, humanhuman

TSL 3

Gene LMO4, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-204ENST00000495705 CLHC1Q8NHS4 586 aa18.64■□□□□ 0.57
LMO4-204ENST00000495705 ZNF675Q8TD23 568 aa18.64■□□□□ 0.57
LMO4-204ENST00000495705 HAS2Q92819 552 aa18.64■□□□□ 0.57
LMO4-204ENST00000495705 BBS4Q96RK4 519 aa18.64■□□□□ 0.57
LMO4-204ENST00000495705 NPAS2Q99743 824 aa18.64■□□□□ 0.57
LMO4-204ENST00000495705 CDCP1Q9H5V8 836 aa18.64■□□□□ 0.57
LMO4-204ENST00000495705 BAIAP2L1Q9UHR4 511 aa18.64■□□□□ 0.57
LMO4-204ENST00000495705 EXO1Q9UQ84 846 aaKnown RBP18.64■□□□□ 0.57
LMO4-204ENST00000495705 CFAP46Q8IYW2 2715 aa18.64■□□□□ 0.57
LMO4-204ENST00000495705 OR6C76A6NM76 312 aa18.63■□□□□ 0.57
LMO4-204ENST00000495705 SDHDO14521 159 aa18.63■□□□□ 0.57
LMO4-204ENST00000495705 FCHO1O14526 889 aa18.63■□□□□ 0.57
LMO4-204ENST00000495705 DYNC1I1O14576 645 aa18.63■□□□□ 0.57
LMO4-204ENST00000495705 LRATO95237 230 aa18.63■□□□□ 0.57
LMO4-204ENST00000495705 PRB1P04280 392 aa18.63■□□□□ 0.57
LMO4-204ENST00000495705 LBPP18428 481 aa18.63■□□□□ 0.57
LMO4-204ENST00000495705 NTSP30990 170 aa18.63■□□□□ 0.57
LMO4-204ENST00000495705 MLF1P58340 268 aa18.63■□□□□ 0.57
LMO4-204ENST00000495705 RNF4P78317 190 aa18.63■□□□□ 0.57
LMO4-204ENST00000495705 FUT7Q11130 342 aa18.63■□□□□ 0.57
LMO4-204ENST00000495705 MAP4K2Q12851 820 aa18.63■□□□□ 0.57
LMO4-204ENST00000495705 PDE7AQ13946 482 aa18.63■□□□□ 0.57
LMO4-204ENST00000495705 PRICKLE4Q2TBC4 344 aa18.63■□□□□ 0.57
LMO4-204ENST00000495705 FAM180BQ6P0A1 224 aa18.63■□□□□ 0.57
LMO4-204ENST00000495705 RNF111Q6ZNA4 994 aa18.63■□□□□ 0.57
LMO4-204ENST00000495705 RGS9BPQ6ZS82 235 aa18.63■□□□□ 0.57
LMO4-204ENST00000495705 LARP4Q71RC2 724 aaKnown RBP eCLIP18.63■□□□□ 0.57
LMO4-204ENST00000495705 FAM9CQ8IZT9 166 aa18.63■□□□□ 0.57
LMO4-204ENST00000495705 BEST3Q8N1M1 668 aa18.63■□□□□ 0.57
LMO4-204ENST00000495705 VWA5B2Q8N398 1253 aa18.63■□□□□ 0.57
LMO4-204ENST00000495705 ZNF843Q8N446 348 aa18.63■□□□□ 0.57
LMO4-204ENST00000495705 GFM2Q969S9 779 aaKnown RBP18.63■□□□□ 0.57
LMO4-204ENST00000495705 PNPLA2Q96AD5 504 aa18.63■□□□□ 0.57
LMO4-204ENST00000495705 PPCDCQ96CD2 204 aa18.63■□□□□ 0.57
LMO4-204ENST00000495705 BRINP2Q9C0B6 783 aa18.63■□□□□ 0.57
LMO4-204ENST00000495705 MAT2BQ9NZL9 334 aa18.63■□□□□ 0.57
LMO4-204ENST00000495705 MAPRE3Q9UPY8 281 aa18.63■□□□□ 0.57
LMO4-204ENST00000495705 SMG1Q96Q15 3661 aaKnown RBP18.63■□□□□ 0.57
LMO4-204ENST00000495705 GABRR3A8MPY1 467 aa18.62■□□□□ 0.57
LMO4-204ENST00000495705 MYO1GB0I1T2 1018 aa18.62■□□□□ 0.57
LMO4-204ENST00000495705 HRKO00198 91 aa18.62■□□□□ 0.57
LMO4-204ENST00000495705 AKAP10O43572 662 aa18.62■□□□□ 0.57
LMO4-204ENST00000495705 C1QL1O75973 258 aa18.62■□□□□ 0.57
LMO4-204ENST00000495705 SLITRK5O94991 958 aa18.62■□□□□ 0.57
LMO4-204ENST00000495705 WDPCPO95876 746 aa18.62■□□□□ 0.57
LMO4-204ENST00000495705 CT62P0C5K7 136 aa18.62■□□□□ 0.57
LMO4-204ENST00000495705 PCSK2P16519 638 aa18.62■□□□□ 0.57
LMO4-204ENST00000495705 CASRP41180 1078 aa18.62■□□□□ 0.57
LMO4-204ENST00000495705 CD97P48960 835 aa18.62■□□□□ 0.57
LMO4-204ENST00000495705 SLC37A1P57057 533 aa18.62■□□□□ 0.57
LMO4-204ENST00000495705 DUSP2Q05923 314 aa18.62■□□□□ 0.57
LMO4-204ENST00000495705 PTGR1Q14914 329 aa18.62■□□□□ 0.57
LMO4-204ENST00000495705 SLC6A19Q695T7 634 aa18.62■□□□□ 0.57
LMO4-204ENST00000495705 OGFOD2Q6N063 350 aa18.62■□□□□ 0.57
LMO4-204ENST00000495705 Q6ZS92 163 aa18.62■□□□□ 0.57
LMO4-204ENST00000495705 SLC29A4Q7RTT9 530 aa18.62■□□□□ 0.57
LMO4-204ENST00000495705 CCDC116Q8IYX3 515 aa18.62■□□□□ 0.57
LMO4-204ENST00000495705 OR7G1Q8NGA0 311 aa18.62■□□□□ 0.57
LMO4-204ENST00000495705 NUBPLQ8TB37 319 aa18.62■□□□□ 0.57
LMO4-204ENST00000495705 THAP3Q8WTV1 239 aaPredicted RBP18.62■□□□□ 0.57
LMO4-204ENST00000495705 CTHRC1Q96CG8 243 aa18.62■□□□□ 0.57
LMO4-204ENST00000495705 ERP27Q96DN0 273 aa18.62■□□□□ 0.57
LMO4-204ENST00000495705 SLCO1B3Q9NPD5 702 aa18.62■□□□□ 0.57
LMO4-204ENST00000495705 B3GNT3Q9Y2A9 372 aa18.62■□□□□ 0.57
LMO4-204ENST00000495705 HEMK1Q9Y5R4 338 aaPredicted RBP18.62■□□□□ 0.57
LMO4-204ENST00000495705 BSNQ9UPA5 3926 aa18.62■□□□□ 0.57
LMO4-204ENST00000495705 OR5H15A6NDH6 313 aa18.61■□□□□ 0.57
LMO4-204ENST00000495705 SCAMP2O15127 329 aaKnown RBP18.61■□□□□ 0.57
LMO4-204ENST00000495705 PDPK1O15530 556 aa18.61■□□□□ 0.57
LMO4-204ENST00000495705 PRKNO60260 465 aaPredicted RBP18.61■□□□□ 0.57
LMO4-204ENST00000495705 G6PDP11413 515 aa18.61■□□□□ 0.57
LMO4-204ENST00000495705 PRPS1L1P21108 318 aa18.61■□□□□ 0.57
LMO4-204ENST00000495705 EPHA3P29320 983 aa18.61■□□□□ 0.57
LMO4-204ENST00000495705 TLR1Q15399 786 aa18.61■□□□□ 0.57
LMO4-204ENST00000495705 NADK2Q4G0N4 442 aa18.61■□□□□ 0.57
LMO4-204ENST00000495705 C9orf40Q8IXQ3 194 aa18.61■□□□□ 0.57
LMO4-204ENST00000495705 SUN3Q8TAQ9 357 aa18.61■□□□□ 0.57
LMO4-204ENST00000495705 DOK4Q8TEW6 326 aa18.61■□□□□ 0.57
LMO4-204ENST00000495705 MAELQ96JY0 434 aaKnown RBP18.61■□□□□ 0.57
LMO4-204ENST00000495705 UTP23Q9BRU9 249 aaKnown RBP18.61■□□□□ 0.57
LMO4-204ENST00000495705 MFRPQ9BY79 579 aa18.61■□□□□ 0.57
LMO4-204ENST00000495705 RYDENQ9NUL5 291 aaKnown RBP18.61■□□□□ 0.57
LMO4-204ENST00000495705 PLA2G3Q9NZ20 509 aa18.61■□□□□ 0.57
LMO4-204ENST00000495705 SH3BP4Q9P0V3 963 aa18.61■□□□□ 0.57
LMO4-204ENST00000495705 MYOTQ9UBF9 498 aa18.61■□□□□ 0.57
LMO4-204ENST00000495705 ATP6V1HQ9UI12 483 aa18.61■□□□□ 0.57
LMO4-204ENST00000495705 CFL2Q9Y281 166 aa18.61■□□□□ 0.57
LMO4-204ENST00000495705 YARS2Q9Y2Z4 477 aaKnown RBP18.61■□□□□ 0.57
LMO4-204ENST00000495705 USH1CQ9Y6N9 552 aa18.61■□□□□ 0.57
LMO4-204ENST00000495705 B8ZZF3 427 aa18.6■□□□□ 0.57
LMO4-204ENST00000495705 MAN1A2O60476 641 aa18.6■□□□□ 0.57
LMO4-204ENST00000495705 ITGA10O75578 1167 aa18.6■□□□□ 0.57
LMO4-204ENST00000495705 BCAS2O75934 225 aaPredicted RBP18.6■□□□□ 0.57
LMO4-204ENST00000495705 TGDSO95455 350 aa18.6■□□□□ 0.57
LMO4-204ENST00000495705 CLPSP04118 112 aa18.6■□□□□ 0.57
LMO4-204ENST00000495705 SSTR4P31391 388 aa18.6■□□□□ 0.57
LMO4-204ENST00000495705 TRHRP34981 398 aaPredicted RBP18.6■□□□□ 0.57
LMO4-204ENST00000495705 TNFSF10P50591 281 aa18.6■□□□□ 0.57
LMO4-204ENST00000495705 NCBP2P52298 156 aaKnown RBP eCLIP18.6■□□□□ 0.57
LMO4-204ENST00000495705 C21orf58P58505 322 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms