RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 Q8NFD4 153 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 OR10J5Q8NHC4 309 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 CENPIQ92674 756 aaPredicted RBP6.54□□□□□ -1.36
VPS13B-205ENST00000493587 RAB3CQ96E17 227 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 PDLIM5Q96HC4 596 aaKnown RBP6.54□□□□□ -1.36
VPS13B-205ENST00000493587 C5orf34Q96MH7 638 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 KCTD15Q96SI1 283 aaPredicted RBP6.54□□□□□ -1.36
VPS13B-205ENST00000493587 ENKD1Q9H0I2 346 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 KCNK12Q9HB15 430 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 TXNRD2Q9NNW7 524 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 SLC6A20Q9NP91 592 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 SLAMF8Q9P0V8 285 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 UXTQ9UBK9 157 aaPredicted RBP6.54□□□□□ -1.36
VPS13B-205ENST00000493587 EXO1Q9UQ84 846 aaKnown RBP6.54□□□□□ -1.36
VPS13B-205ENST00000493587 PCDHA9Q9Y5H5 950 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 TRPV2Q9Y5S1 764 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 PTGDR2Q9Y5Y4 395 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 OBSL1O75147 1896 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 ABHD14A-ACY1A0A1B0GW23 586 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 NCF1BA6NI72 391 aaPredicted RBP6.54□□□□□ -1.36
VPS13B-205ENST00000493587 NCF1CA8MVU1 366 aaPredicted RBP6.54□□□□□ -1.36
VPS13B-205ENST00000493587 ZNF705EA8MWA4 302 aaPredicted RBP6.54□□□□□ -1.36
VPS13B-205ENST00000493587 PRPSAP2O60256 369 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 PRAMEF2O60811 474 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 FARS2O95363 451 aaKnown RBP6.54□□□□□ -1.36
VPS13B-205ENST00000493587 F12P00748 615 aaPredicted RBP6.54□□□□□ -1.36
VPS13B-205ENST00000493587 TFP02787 698 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 EPHA2P29317 976 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 RAB5CP51148 216 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 P2RY14Q15391 338 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 DHCR24Q15392 516 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 RNF151Q2KHN1 245 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 CDNFQ49AH0 187 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.54□□□□□ -1.36
VPS13B-205ENST00000493587 LIPJQ5W064 366 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 B3GLCTQ6Y288 498 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 SV2AQ7L0J3 742 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 RABEPKQ7Z6M1 372 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 RIMKLAQ8IXN7 391 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 PRR18Q8N4B5 295 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 BTN2A2Q8WVV5 523 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 COL26A1Q96A83 441 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 C14orf79Q96F83 325 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 CPNE2Q96FN4 548 aaPredicted RBP6.54□□□□□ -1.36
VPS13B-205ENST00000493587 TSPAN17Q96FV3 270 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 KCNC2Q96PR1 638 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 TMEM209Q96SK2 561 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 MRPL45Q9BRJ2 306 aaKnown RBP6.54□□□□□ -1.36
VPS13B-205ENST00000493587 NCOR1P1Q9H4R4 102 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 DLL4Q9NR61 685 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 STOX2Q9P2F5 926 aaPredicted RBP6.54□□□□□ -1.36
VPS13B-205ENST00000493587 FBXO10Q9UK96 956 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 UBQLN1Q9UMX0 589 aaKnown RBP6.54□□□□□ -1.36
VPS13B-205ENST00000493587 PCDHB10Q9UN67 800 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 PCDHB9Q9Y5E1 797 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 TMEM72A0PK05 275 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 B4E171 279 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 CASKO14936 926 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 ADAMDEC1O15204 470 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 FADS1O60427 444 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 SLC34A2O95436 690 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 PEX11BO96011 259 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 C1RP00736 705 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 LINC00032P0C843 101 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 UGT2B7P16662 529 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 EFNA1P20827 205 aaPredicted RBP6.53□□□□□ -1.36
VPS13B-205ENST00000493587 GPX3P22352 226 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 S100A7P31151 101 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 ARL2P36404 184 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 HSPA7P48741 367 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 PPM1FP49593 454 aaPredicted RBP6.53□□□□□ -1.36
VPS13B-205ENST00000493587 ITGA1P56199 1179 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 ZNF252P-AS1Q0IIN9 211 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 KCNAB1Q14722 419 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 PAGE3Q5JUK9 113 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 SWSAP1Q6NVH7 229 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 DLEU7Q6UYE1 221 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 TSPAN33Q86UF1 283 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 LRRTM4Q86VH4 590 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 FAM126BQ8IXS8 530 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 PQLC3Q8N755 202 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 C1GALT1C1Q96EU7 318 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 FCRL1Q96LA6 429 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 C3orf30Q96M34 536 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 AMDHD1Q96NU7 426 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 OR2M2Q96R28 347 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 CCNL2Q96S94 520 aaPredicted RBP6.53□□□□□ -1.36
VPS13B-205ENST00000493587 HBEGFQ99075 208 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 PKP4Q99569 1192 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 WDR26Q9H7D7 661 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 RNF146Q9NTX7 359 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 FLRT1Q9NZU1 646 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 RNF181Q9P0P0 153 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 OAS3Q9Y6K5 1087 aaKnown RBP6.53□□□□□ -1.36
VPS13B-205ENST00000493587 ZNF106Q9H2Y7 1883 aaKnown RBP6.53□□□□□ -1.36
VPS13B-205ENST00000493587 CEP350Q5VT06 3117 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 FAM170BA6NMN3 283 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 CLCA1A8K7I4 914 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 DGAT1O75907 488 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 PMP2P02689 132 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms