RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 IL1RL2Q9HB29 575 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 GALNT9Q9HCQ5 603 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 COQ3Q9NZJ6 369 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 PLA2G2EQ9NZK7 142 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 TMEM216Q9P0N5 145 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 HEY2Q9UBP5 337 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 COPS7AQ9UBW8 275 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 ABCA12Q86UK0 2595 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 MYO9AB2RTY4 2548 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 ADGRG4Q8IZF6 3080 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 MED12Q93074 2177 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 TRGV5A0A0B4J1U4 118 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 IQANK1A0A1B0GTG1 560 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 ACOT7O00154 380 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 GNB5O14775 395 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 IGHG3P01860 377 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 RPS17P08708 135 aaKnown RBP8.17□□□□□ -1.1
HDAC3-211ENST00000491581 FBXO45P0C2W1 286 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 S1PR1P21453 382 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 NT5EP21589 574 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 PTX3P26022 381 aaPredicted RBP8.17□□□□□ -1.1
HDAC3-211ENST00000491581 MAN2A2P49641 1150 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 CCNG1P51959 295 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 LSM11P83369 360 aaKnown RBP eCLIP8.17□□□□□ -1.1
HDAC3-211ENST00000491581 PLIN5Q00G26 463 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 MGAT2Q10469 447 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 SLC10A1Q14973 349 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 MPEG1Q2M385 716 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 TRMT12Q53H54 448 aaKnown RBP8.17□□□□□ -1.1
HDAC3-211ENST00000491581 EIPR1Q53HC9 387 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 WIPI1Q5MNZ9 446 aaPredicted RBP8.17□□□□□ -1.1
HDAC3-211ENST00000491581 NDUFAF5Q5TEU4 345 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 SLC22A10Q63ZE4 541 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 OPN5Q6U736 354 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 GK5Q6ZS86 529 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 COMMD6Q7Z4G1 85 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 WDR53Q7Z5U6 358 aaPredicted RBP8.17□□□□□ -1.1
HDAC3-211ENST00000491581 CDH24Q86UP0 819 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 SLC22A16Q86VW1 577 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 NUDT13Q86X67 352 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 ST13P4Q8IZP2 240 aaPredicted RBP8.17□□□□□ -1.1
HDAC3-211ENST00000491581 GOLM1Q8NBJ4 401 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 RELL2Q8NC24 303 aaPredicted RBP8.17□□□□□ -1.1
HDAC3-211ENST00000491581 SRFBP1Q8NEF9 429 aaKnown RBP8.17□□□□□ -1.1
HDAC3-211ENST00000491581 TNIP2Q8NFZ5 429 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 OR5L2Q8NGL0 311 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 OR8K3Q8NH51 312 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 NUBPLQ8TB37 319 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 TRPC4APQ8TEL6 797 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 PAQR8Q8TEZ7 354 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 DIO2Q92813 273 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 TANKQ92844 425 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 UBE2E3Q969T4 207 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 ATP6V1E2Q96A05 226 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 ADIPOR1Q96A54 375 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 NODALQ96S42 347 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 TREX2Q9BQ50 279 aaPredicted RBP8.17□□□□□ -1.1
HDAC3-211ENST00000491581 ITPAQ9BY32 194 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 BRINP2Q9C0B6 783 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 ROGDIQ9GZN7 287 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 NXF5Q9H1B4 397 aaKnown RBP8.17□□□□□ -1.1
HDAC3-211ENST00000491581 CXorf21Q9HAI6 301 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 PHF11Q9UIL8 331 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 ACAD8Q9UKU7 415 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 CES1P1Q9UKY3 287 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 SLC12A4Q9UP95 1085 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 PCDHGA11Q9Y5H2 935 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 SPACA6W5XKT8 324 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 PCNX3Q9H6A9 2034 aa8.17□□□□□ -1.1
HDAC3-211ENST00000491581 A0A1B0GVC2 190 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 C2orf92A0A1B0GVN3 265 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 SYCE1LA8MT33 242 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 DIAPH2O60879 1101 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 TRIM3O75382 744 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-211ENST00000491581 ERAL1O75616 437 aaKnown RBP8.16□□□□□ -1.1
HDAC3-211ENST00000491581 COX7A2P14406 83 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 PCSK2P16519 638 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 GPX3P22352 226 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 CNTFP26441 200 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 GDF1P27539 372 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 MSX1P28360 303 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 CHRNB4P30926 498 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 PTGDSP41222 190 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 BUD31P41223 144 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-211ENST00000491581 ALDH9A1P49189 494 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 XKP51811 444 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 FOXA1P55317 472 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 RAE1P78406 368 aaKnown RBP8.16□□□□□ -1.1
HDAC3-211ENST00000491581 TBL3Q12788 808 aaKnown RBP8.16□□□□□ -1.1
HDAC3-211ENST00000491581 NAB1Q13506 487 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 CUL3Q13618 768 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 RCN2Q14257 317 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 NTRK2Q16620 822 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 SPRED3Q2MJR0 410 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 UNC50Q53HI1 259 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 CCNYL2Q5T2Q4 361 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 C1orf185Q5T7R7 199 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 FRG2Q64ET8 278 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 TTC19Q6DKK2 380 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-211ENST00000491581 SLC29A4Q7RTT9 530 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms