RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 MEF2AQ02078 507 aaPredicted RBP8□□□□□ -1.13
VTI1A-207ENST00000489357 NPRL3Q12980 569 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 CDK5R2Q13319 367 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 SIM2Q14190 667 aaPredicted RBP8□□□□□ -1.13
VTI1A-207ENST00000489357 CEBPEQ15744 281 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 RPE65Q16518 533 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 LPAL2Q16609 132 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 MICAQ29983 383 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 MANEAQ5SRI9 462 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 TBC1D3GQ6DHY5 549 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 GTF2IRD2BQ6EKJ0 949 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 MRM1Q6IN84 353 aaKnown RBP8□□□□□ -1.13
VTI1A-207ENST00000489357 TBC1D3CQ6IPX1 549 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 ZNF425Q6IV72 752 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 CEP68Q76N32 757 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 VTCN1Q7Z7D3 282 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 GTF2IRD2Q86UP8 949 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 RNF130Q86XS8 419 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 KRT73Q86Y46 540 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 CLVS1Q8IUQ0 354 aaPredicted RBP8□□□□□ -1.13
VTI1A-207ENST00000489357 TBC1D3Q8IZP1 549 aaPredicted RBP8□□□□□ -1.13
VTI1A-207ENST00000489357 SPARTQ8N0X7 666 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 TTC29Q8NA56 475 aaPredicted RBP8□□□□□ -1.13
VTI1A-207ENST00000489357 ATG16L2Q8NAA4 619 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 MFSD9Q8NBP5 474 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 CADM4Q8NFZ8 388 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 OR2L3Q8NG85 312 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 OR52E1Q8NGJ3 308 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 OR4C15Q8NGM1 316 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 SPPL2AQ8TCT8 520 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 DNASE2BQ8WZ79 361 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 CIDECQ96AQ7 238 aaPredicted RBP8□□□□□ -1.13
VTI1A-207ENST00000489357 TAMM41Q96BW9 452 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 WDR92Q96MX6 357 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 PRAP1Q96NZ9 151 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 F2RL3Q96RI0 385 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 MAPKAP1Q9BPZ7 522 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 ORAI3Q9BRQ5 295 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 ACAT2Q9BWD1 397 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 BTBD2Q9BX70 525 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 OSGEPL1Q9H4B0 414 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 ZNF556Q9HAH1 456 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 BCL2L10Q9HD36 194 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 IMP3Q9NV31 184 aaKnown RBP8□□□□□ -1.13
VTI1A-207ENST00000489357 EXD2Q9NVH0 621 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 CALML5Q9NZT1 146 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 P2RX2Q9UBL9 471 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 CIDEBQ9UHD4 219 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 KCND3Q9UK17 655 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 UTS2RQ9UKP6 389 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 PSME2Q9UL46 239 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 WDR37Q9Y2I8 494 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 PCDHGA5Q9Y5G8 931 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 ENTPD2Q9Y5L3 495 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 GMPPBQ9Y5P6 360 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 MAGED1Q9Y5V3 778 aaPredicted RBP8□□□□□ -1.13
VTI1A-207ENST00000489357 LYVE1Q9Y5Y7 322 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 HS3ST3A1Q9Y663 406 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 ENPP4Q9Y6X5 453 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 U3KQV3 271 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 PCDH15Q96QU1 1955 aa8□□□□□ -1.13
VTI1A-207ENST00000489357 ADAMTS9Q9P2N4 1935 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 TP53BP1Q12888 1972 aaPredicted RBP7.99□□□□□ -1.13
VTI1A-207ENST00000489357 SPTBN4Q9H254 2564 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 IGKV1-8A0A0C4DH67 115 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 A0A1B0GTW7 788 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 OR5K4A6NMS3 321 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 PDZK1P1A8MUH7 402 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 METTL12A8MUP2 240 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 SAP18O00422 153 aaKnown RBP7.99□□□□□ -1.13
VTI1A-207ENST00000489357 CASC3O15234 703 aaKnown RBP7.99□□□□□ -1.13
VTI1A-207ENST00000489357 TNFSF14O43557 240 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 LATO43561 262 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 SOX30O94993 753 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 AGR2O95994 175 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 FUCA1P04066 466 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 TFPTP0C1Z6 253 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 NELFEP18615 380 aaKnown RBP7.99□□□□□ -1.13
VTI1A-207ENST00000489357 EFNA1P20827 205 aaPredicted RBP7.99□□□□□ -1.13
VTI1A-207ENST00000489357 ZNF10P21506 573 aaPredicted RBP7.99□□□□□ -1.13
VTI1A-207ENST00000489357 HIST1H1TP22492 207 aaPredicted RBP7.99□□□□□ -1.13
VTI1A-207ENST00000489357 RPL10P27635 214 aaKnown RBP7.99□□□□□ -1.13
VTI1A-207ENST00000489357 ELK4P28324 431 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 CD6P30203 668 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 RRM2P31350 389 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 ACSL1P33121 698 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 HOXD12P35452 270 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 SOAT1P35610 550 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 LIMS1P48059 325 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 KHKP50053 298 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 SLC35A2P78381 396 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 IL5RAQ01344 420 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 RGS1Q08116 209 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 PMS2P3Q13401 168 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 RAPSNQ13702 412 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 CLCA4Q14CN2 919 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 SF1Q15637 639 aaKnown RBP7.99□□□□□ -1.13
VTI1A-207ENST00000489357 COLEC12Q5KU26 742 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 XAF1Q6GPH4 301 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 LAIR1Q6GTX8 287 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms