RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 FGFBP3Q8TAT2 258 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 UBTD2Q8WUN7 234 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 UBLCP1Q8WVY7 318 aaPredicted RBP3.04□□□□□ -1.92
SMC6-208ENST00000481708 C17orf50Q8WW18 174 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 SSMEM1Q8WWF3 244 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 TUBA1CQ9BQE3 449 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 CRNKL1Q9BZJ0 848 aaKnown RBP3.04□□□□□ -1.92
SMC6-208ENST00000481708 ATG10Q9H0Y0 220 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 NUP205Q92621 2012 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 LRRC3CA6NJW4 275 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 ANKRD30BLA7E2S9 258 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 HNRNPCL2B2RXH8 293 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 E9PAM4 449 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 F8VVB4 439 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 F8VWA3 439 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 TIMM23O14925 209 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 MID1O15344 667 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 MT-CO3P00414 261 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 CALCAP01258 141 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 KRT14P02533 472 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 IVLP07476 585 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 HOXA9P31269 272 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 CYLC1P35663 651 aaPredicted RBP3.04□□□□□ -1.92
SMC6-208ENST00000481708 FMO5P49326 533 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 ENTPD8Q5MY95 495 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 PDPK2PQ6A1A2 396 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 CORO6Q6QEF8 472 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 TRMT11Q7Z4G4 463 aaKnown RBP3.04□□□□□ -1.92
SMC6-208ENST00000481708 SERPINA11Q86U17 422 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 SLC22A16Q86VW1 577 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 TPRA1Q86W33 373 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 TBC1D10CQ8IV04 446 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 PCDH20Q8N6Y1 951 aaKnown RBP3.04□□□□□ -1.92
SMC6-208ENST00000481708 TRPV3Q8NET8 790 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 SPATA4Q8NEY3 305 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 NANPQ8TBE9 248 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 PROKR1Q8TCW9 393 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 ST8SIA1Q92185 356 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 TMEM45BQ96B21 275 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 HMCESQ96FZ2 354 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 MSANTD3Q96H12 275 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 MNTQ99583 582 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 RHOJQ9H4E5 214 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 GPR173Q9NS66 373 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 SMOXQ9NWM0 555 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 LRWD1Q9UFC0 647 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 HS3ST3A1Q9Y663 406 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 CPAMD8Q8IZJ3 1885 aa3.04□□□□□ -1.92
SMC6-208ENST00000481708 EIF4E1BA6NMX2 242 aaKnown RBP3.03□□□□□ -1.92
SMC6-208ENST00000481708 TARM1B6A8C7 271 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 MLNRO43193 412 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 RNF13O43567 381 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 KRT86O43790 486 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 CST1P01037 141 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 MAGEA11P43364 429 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 ZNF75DP51815 510 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 B3GALT5-AS1P59052 145 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 SLC20A2Q08357 652 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 EXT1Q16394 746 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 MRPL23Q16540 153 aaKnown RBP3.03□□□□□ -1.92
SMC6-208ENST00000481708 TMEM31Q5JXX7 168 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 NKAIN2Q5VXU1 208 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 KIAA0895LQ68EN5 471 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 MRPL10Q7Z7H8 261 aaKnown RBP3.03□□□□□ -1.92
SMC6-208ENST00000481708 LGI4Q8N135 537 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 FGFRL1Q8N441 504 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 THAP8Q8NA92 274 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 B3GALNT2Q8NCR0 500 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 NPEPL1Q8NDH3 523 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 OR4L1Q8NH43 312 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 EME1Q96AY2 570 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 CBWD1Q9BRT8 395 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 ANKRD60Q9BZ19 345 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 ZMYND12Q9H0C1 365 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 C8orf33Q9H7E9 229 aaPredicted RBP3.03□□□□□ -1.92
SMC6-208ENST00000481708 RAVER2Q9HCJ3 691 aaKnown RBP3.03□□□□□ -1.92
SMC6-208ENST00000481708 SPAG4Q9NPE6 437 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 MRPS7Q9Y2R9 242 aaKnown RBP3.03□□□□□ -1.92
SMC6-208ENST00000481708 ABCB11O95342 1321 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 ATXN2Q99700 1313 aaKnown RBP3.03□□□□□ -1.92
SMC6-208ENST00000481708 KIAA1549Q9HCM3 1950 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 TRGV11A0A075B6L2 103 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 SUPT3HB4E1H0 165 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 ZSCAN12O43309 604 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 LAMTOR5O43504 91 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 CSF2P04141 144 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 CD59P13987 128 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 AVPR1AP37288 418 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 PPT1P50897 306 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 ATP5J2P56134 94 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 SNRPEP62304 92 aaKnown RBP3.03□□□□□ -1.92
SMC6-208ENST00000481708 CACNG1Q06432 222 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 DNAJC3Q13217 504 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 CUL3Q13618 768 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 DHX34Q14147 1143 aaKnown RBP3.03□□□□□ -1.92
SMC6-208ENST00000481708 TMEM268Q5VZI3 342 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 OR7E24Q6IFN5 339 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 CTR9Q6PD62 1173 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 HSDL2Q6YN16 418 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 C1QL4Q86Z23 238 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms