RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 RGS9BPQ6ZS82 235 aa10.07□□□□□ -0.8
ATG4B-219ENST00000479941 Q6ZS92 163 aa10.07□□□□□ -0.8
ATG4B-219ENST00000479941 LARP4Q71RC2 724 aaKnown RBP eCLIP10.07□□□□□ -0.8
ATG4B-219ENST00000479941 R3HCC1LQ7Z5L2 792 aaKnown RBP10.07□□□□□ -0.8
ATG4B-219ENST00000479941 PTRH1Q86Y79 214 aaKnown RBP10.07□□□□□ -0.8
ATG4B-219ENST00000479941 WDR75Q8IWA0 830 aaKnown RBP10.07□□□□□ -0.8
ATG4B-219ENST00000479941 CCDC116Q8IYX3 515 aa10.07□□□□□ -0.8
ATG4B-219ENST00000479941 FAM9CQ8IZT9 166 aa10.07□□□□□ -0.8
ATG4B-219ENST00000479941 LIX1Q8N485 282 aa10.07□□□□□ -0.8
ATG4B-219ENST00000479941 RBMXL3Q8N7X1 1067 aaKnown RBP10.07□□□□□ -0.8
ATG4B-219ENST00000479941 ZNF321PQ8N8H1 164 aa10.07□□□□□ -0.8
ATG4B-219ENST00000479941 OR7G1Q8NGA0 311 aa10.07□□□□□ -0.8
ATG4B-219ENST00000479941 PNPLA2Q96AD5 504 aa10.07□□□□□ -0.8
ATG4B-219ENST00000479941 ERP27Q96DN0 273 aa10.07□□□□□ -0.8
ATG4B-219ENST00000479941 BBS4Q96RK4 519 aa10.07□□□□□ -0.8
ATG4B-219ENST00000479941 NPAS2Q99743 824 aa10.07□□□□□ -0.8
ATG4B-219ENST00000479941 C1orf50Q9BV19 199 aa10.07□□□□□ -0.8
ATG4B-219ENST00000479941 CDCP1Q9H5V8 836 aa10.07□□□□□ -0.8
ATG4B-219ENST00000479941 REEP4Q9H6H4 257 aa10.07□□□□□ -0.8
ATG4B-219ENST00000479941 RYDENQ9NUL5 291 aaKnown RBP10.07□□□□□ -0.8
ATG4B-219ENST00000479941 NOP53Q9NZM5 478 aaKnown RBP10.07□□□□□ -0.8
ATG4B-219ENST00000479941 BAIAP2L1Q9UHR4 511 aa10.07□□□□□ -0.8
ATG4B-219ENST00000479941 ANAPC2Q9UJX6 822 aa10.07□□□□□ -0.8
ATG4B-219ENST00000479941 MAPRE3Q9UPY8 281 aa10.07□□□□□ -0.8
ATG4B-219ENST00000479941 EXO1Q9UQ84 846 aaKnown RBP10.07□□□□□ -0.8
ATG4B-219ENST00000479941 ERVK-19Q9WJR5 959 aa10.07□□□□□ -0.8
ATG4B-219ENST00000479941 B3GNT3Q9Y2A9 372 aa10.07□□□□□ -0.8
ATG4B-219ENST00000479941 OR5H15A6NDH6 313 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 OR6C76A6NM76 312 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 B8ZZF3 427 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 HRKO00198 91 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 SDHDO14521 159 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 DYNC1I1O14576 645 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 PRKNO60260 465 aaPredicted RBP10.06□□□□□ -0.8
ATG4B-219ENST00000479941 SLITRK5O94991 958 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 LRATO95237 230 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 WDPCPO95876 746 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 PRB1P04280 392 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 CT62P0C5K7 136 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 LBPP18428 481 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 PRPS1L1P21108 318 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 NTSP30990 170 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 HPCAL1P37235 193 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 CD97P48960 835 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 SLC37A1P57057 533 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 MLF1P58340 268 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 MGAT2Q10469 447 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 PDE7AQ13946 482 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 PTGR1Q14914 329 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 TLR1Q15399 786 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 OGFOD2Q6N063 350 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 FAM180BQ6P0A1 224 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 SLC29A4Q7RTT9 530 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 BEST3Q8N1M1 668 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 VWA5B2Q8N398 1253 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 ZNF843Q8N446 348 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 CLHC1Q8NHS4 586 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 NUBPLQ8TB37 319 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 ZNF675Q8TD23 568 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 GFM2Q969S9 779 aaKnown RBP10.06□□□□□ -0.8
ATG4B-219ENST00000479941 PPCDCQ96CD2 204 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 CTHRC1Q96CG8 243 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 MAELQ96JY0 434 aaKnown RBP10.06□□□□□ -0.8
ATG4B-219ENST00000479941 PRPF18Q99633 342 aaKnown RBP10.06□□□□□ -0.8
ATG4B-219ENST00000479941 UTP23Q9BRU9 249 aaKnown RBP10.06□□□□□ -0.8
ATG4B-219ENST00000479941 BRINP2Q9C0B6 783 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 OR10A5Q9H207 317 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 SLCO1B3Q9NPD5 702 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 MAT2BQ9NZL9 334 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 SH3BP4Q9P0V3 963 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 MYOTQ9UBF9 498 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 CFL2Q9Y281 166 aa10.06□□□□□ -0.8
ATG4B-219ENST00000479941 YARS2Q9Y2Z4 477 aaKnown RBP10.06□□□□□ -0.8
ATG4B-219ENST00000479941 HEMK1Q9Y5R4 338 aaPredicted RBP10.06□□□□□ -0.8
ATG4B-219ENST00000479941 TNRC6AQ8NDV7 1962 aaKnown RBP10.06□□□□□ -0.8
ATG4B-219ENST00000479941 TRAV17A0A0B4J275 112 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 TMEM200CA6NKL6 621 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 GABRR3A8MPY1 467 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 ZNF195O14628 629 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 SCAMP2O15127 329 aaKnown RBP10.05□□□□□ -0.8
ATG4B-219ENST00000479941 AKAP10O43572 662 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 MAN1A2O60476 641 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 ITGA10O75578 1167 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 BCAS2O75934 225 aaPredicted RBP10.05□□□□□ -0.8
ATG4B-219ENST00000479941 C1QL1O75973 258 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 TGDSO95455 350 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 CLPSP04118 112 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 G6PDP11413 515 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 S1PR1P21453 382 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 EPHA3P29320 983 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 TRHRP34981 398 aaPredicted RBP10.05□□□□□ -0.8
ATG4B-219ENST00000479941 CASRP41180 1078 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 CYB561P49447 251 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 TNFSF10P50591 281 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 NCBP2P52298 156 aaKnown RBP eCLIP10.05□□□□□ -0.8
ATG4B-219ENST00000479941 DIO3P55073 304 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 C21orf58P58505 322 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 DUSP2Q05923 314 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 C19orf57Q0VDD7 668 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 TUBA3CQ13748 450 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms