RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 EVPLQ92817 2033 aa3.77□□□□□ -1.81
VPS13D-207ENST00000476169 ARHGEF11O15085 1522 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 LOC101059948A0A1B0GTJ6 334 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 FAM240BA0A1B0GVZ2 78 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 SH3PXD2BA1X283 911 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 OVOL3O00110 214 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 ARPC1BO15143 372 aaKnown RBP3.76□□□□□ -1.81
VPS13D-207ENST00000476169 ARPC3O15145 178 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 OR1F1O43749 312 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 FLOT1O75955 427 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 NEBLO76041 1014 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 PMS2P2O95744 297 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 GSTA1P08263 222 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 POLR2MP0CAP2 368 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 SLC2A3P11169 496 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 MBL2P11226 248 aaPredicted RBP3.76□□□□□ -1.81
VPS13D-207ENST00000476169 RALBP11234 206 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 PCMT1P22061 227 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 CA4P22748 312 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 HTR5AP47898 357 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 B3GALT5-AS1P59052 145 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 OSTNP61366 133 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 PPIAP62937 165 aaKnown RBP3.76□□□□□ -1.81
VPS13D-207ENST00000476169 HERVK_113P63132 956 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 ERVK-8P63133 956 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 MYL7Q01449 175 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 HYAL1Q12794 435 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 CNTN1Q12860 1018 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 DLG1Q12959 904 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 ARHGAP19Q14CB8 494 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 OR1C1Q15619 314 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 DPYSL2Q16555 572 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 MAPK6Q16659 721 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 C10orf120Q5SQS8 335 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 CARD17Q5XLA6 110 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 TCEAL6Q6IPX3 200 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 KCNIP4Q6PIL6 250 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 KDM7AQ6ZMT4 941 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 KIF6Q6ZMV9 814 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 Q6ZPB1 254 aaPredicted RBP3.76□□□□□ -1.81
VPS13D-207ENST00000476169 DPY19L4Q7Z388 723 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 VSTM4Q8IW00 320 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 FBXL14Q8N1E6 418 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 PELI3Q8N2H9 469 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 CENPSQ8N2Z9 138 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 ARL14Q8N4G2 192 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 RBMXL3Q8N7X1 1067 aaKnown RBP3.76□□□□□ -1.81
VPS13D-207ENST00000476169 TCEANCQ8N8B7 351 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 KCNH5Q8NCM2 988 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 SLC2A14Q8TDB8 520 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 SMPDL3AQ92484 453 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 PCED1BQ96HM7 432 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 AKR1E2Q96JD6 320 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 RPRD1AQ96P16 312 aaPredicted RBP3.76□□□□□ -1.81
VPS13D-207ENST00000476169 INPP4AQ96PE3 977 aaPredicted RBP3.76□□□□□ -1.81
VPS13D-207ENST00000476169 RBM14Q96PK6 669 aaKnown RBP3.76□□□□□ -1.81
VPS13D-207ENST00000476169 ERGIC2Q96RQ1 377 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 POLR3CQ9BUI4 534 aaPredicted RBP3.76□□□□□ -1.81
VPS13D-207ENST00000476169 ERVK-6Q9BXR3 956 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 OR2B2Q9GZK3 357 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 CSTL1Q9H114 145 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 SGK2Q9HBY8 427 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 S100A14Q9HCY8 104 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 RAB18Q9NP72 206 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 SDR39U1Q9NRG7 319 aaPredicted RBP3.76□□□□□ -1.81
VPS13D-207ENST00000476169 TECRQ9NZ01 308 aaKnown RBP3.76□□□□□ -1.81
VPS13D-207ENST00000476169 SPATA7Q9P0W8 599 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 WNT16Q9UBV4 365 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 LCMT1Q9UIC8 334 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 RALYQ9UKM9 306 aaKnown RBP3.76□□□□□ -1.81
VPS13D-207ENST00000476169 POMT2Q9UKY4 750 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 IFT52Q9Y366 437 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 ZNF175Q9Y473 711 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 CARMIL1Q5VZK9 1371 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 PARD3Q8TEW0 1356 aa3.76□□□□□ -1.81
VPS13D-207ENST00000476169 GRIN2AQ12879 1464 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 MAGI1Q96QZ7 1491 aaPredicted RBP3.75□□□□□ -1.81
VPS13D-207ENST00000476169 LOC105371242A0A075B767 164 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 A0A1W2PN81 502 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 HEATR9A2RTY3 570 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 RNF222A6NCQ9 220 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 CD8B2A6NJW9 211 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 C2CD4DB7Z1M9 353 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 E9PMD0 336 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 H3BMH7 237 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 SGK494L7N484 410 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 CLDN5O00501 218 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 SH2D1BO14796 132 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 NEMFO60524 1076 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 NDUFA7O95182 113 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 GOT2P00505 430 aaKnown RBP3.75□□□□□ -1.81
VPS13D-207ENST00000476169 S100A9P06702 114 aaKnown RBP3.75□□□□□ -1.81
VPS13D-207ENST00000476169 IGHV4-31P0DP07 118 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 ZNF12P17014 697 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 CHRNA7P36544 502 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 MAGEA1P43355 309 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 OR1G1P47890 313 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 LGALS3BPQ08380 585 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 BST1Q10588 318 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 SF3B4Q15427 424 aaKnown RBP eCLIP3.75□□□□□ -1.813e-6■■■□□ 17.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms