RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 SLC29A4Q7RTT9 530 aa11.55□□□□□ -0.56
DDX56-209ENST00000473924 LRRC34Q8IZ02 419 aa11.55□□□□□ -0.56
DDX56-209ENST00000473924 VWA5B2Q8N398 1253 aa11.55□□□□□ -0.56
DDX56-209ENST00000473924 ADCY4Q8NFM4 1077 aa11.55□□□□□ -0.56
DDX56-209ENST00000473924 OR5L2Q8NGL0 311 aa11.55□□□□□ -0.56
DDX56-209ENST00000473924 ZNF681Q96N22 645 aa11.55□□□□□ -0.56
DDX56-209ENST00000473924 MFRPQ9BY79 579 aa11.55□□□□□ -0.56
DDX56-209ENST00000473924 WDR55Q9H6Y2 383 aaPredicted RBP11.55□□□□□ -0.56
DDX56-209ENST00000473924 TAS2R7Q9NYW3 318 aa11.55□□□□□ -0.56
DDX56-209ENST00000473924 ZNF223Q9UK11 482 aaPredicted RBP11.55□□□□□ -0.56
DDX56-209ENST00000473924 EXO1Q9UQ84 846 aaKnown RBP11.55□□□□□ -0.56
DDX56-209ENST00000473924 HEMK1Q9Y5R4 338 aaPredicted RBP11.55□□□□□ -0.56
DDX56-209ENST00000473924 USH1CQ9Y6N9 552 aa11.55□□□□□ -0.56
DDX56-209ENST00000473924 CROCCQ5TZA2 2017 aa11.54□□□□□ -0.56
DDX56-209ENST00000473924 FAM208BQ5VWN6 2430 aa11.54□□□□□ -0.56
DDX56-209ENST00000473924 TCP11X1B4DZS4 312 aa11.54□□□□□ -0.56
DDX56-209ENST00000473924 SDHDO14521 159 aa11.54□□□□□ -0.56
DDX56-209ENST00000473924 PDPK1O15530 556 aa11.54□□□□□ -0.56
DDX56-209ENST00000473924 DIAPH2O60879 1101 aa11.54□□□□□ -0.56
DDX56-209ENST00000473924 F10P00742 488 aa11.54□□□□□ -0.56
DDX56-209ENST00000473924 IGKV3-11P04433 115 aa11.54□□□□□ -0.56
DDX56-209ENST00000473924 CT62P0C5K7 136 aa11.54□□□□□ -0.56
DDX56-209ENST00000473924 G6PDP11413 515 aa11.54□□□□□ -0.56
DDX56-209ENST00000473924 PRPS1L1P21108 318 aa11.54□□□□□ -0.56
DDX56-209ENST00000473924 SSTR4P31391 388 aa11.54□□□□□ -0.56
DDX56-209ENST00000473924 PTGER1P34995 402 aa11.54□□□□□ -0.56
DDX56-209ENST00000473924 CASRP41180 1078 aa11.54□□□□□ -0.56
DDX56-209ENST00000473924 NCBP2P52298 156 aaKnown RBP eCLIP11.54□□□□□ -0.56
DDX56-209ENST00000473924 RNF4P78317 190 aa11.54□□□□□ -0.56
DDX56-209ENST00000473924 OC90Q02509 493 aaPredicted RBP11.54□□□□□ -0.56
DDX56-209ENST00000473924 DUSP2Q05923 314 aa11.54□□□□□ -0.56
DDX56-209ENST00000473924 MAP4K2Q12851 820 aa11.54□□□□□ -0.56
DDX56-209ENST00000473924 LTB4RQ15722 352 aa11.54□□□□□ -0.56
DDX56-209ENST00000473924 PRICKLE4Q2TBC4 344 aa11.54□□□□□ -0.56
DDX56-209ENST00000473924 FAM111BQ6SJ93 734 aa11.54□□□□□ -0.56
DDX56-209ENST00000473924 IGFL2Q6UWQ7 119 aa11.54□□□□□ -0.56
DDX56-209ENST00000473924 LARP4Q71RC2 724 aaKnown RBP eCLIP11.54□□□□□ -0.56
DDX56-209ENST00000473924 FAM9CQ8IZT9 166 aa11.54□□□□□ -0.56
DDX56-209ENST00000473924 LGI4Q8N135 537 aa11.54□□□□□ -0.56
DDX56-209ENST00000473924 BEST3Q8N1M1 668 aa11.54□□□□□ -0.56
DDX56-209ENST00000473924 OR8K3Q8NH51 312 aa11.54□□□□□ -0.56
DDX56-209ENST00000473924 SUN3Q8TAQ9 357 aa11.54□□□□□ -0.56
DDX56-209ENST00000473924 MTERF3Q96E29 417 aa11.54□□□□□ -0.56
DDX56-209ENST00000473924 PRPF18Q99633 342 aaKnown RBP11.54□□□□□ -0.56
DDX56-209ENST00000473924 UTP23Q9BRU9 249 aaKnown RBP11.54□□□□□ -0.56
DDX56-209ENST00000473924 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.54□□□□□ -0.56
DDX56-209ENST00000473924 ASIC5Q9NY37 505 aa11.54□□□□□ -0.56
DDX56-209ENST00000473924 PLA2G3Q9NZ20 509 aa11.54□□□□□ -0.56
DDX56-209ENST00000473924 MAT2BQ9NZL9 334 aa11.54□□□□□ -0.56
DDX56-209ENST00000473924 BCAP29Q9UHQ4 241 aa11.54□□□□□ -0.56
DDX56-209ENST00000473924 OR5H15A6NDH6 313 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 OR6C76A6NM76 312 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 GABRR3A8MPY1 467 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 MYO1GB0I1T2 1018 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 WWP2O00308 870 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 SCAMP2O15127 329 aaKnown RBP11.53□□□□□ -0.56
DDX56-209ENST00000473924 PRKNO60260 465 aaPredicted RBP11.53□□□□□ -0.56
DDX56-209ENST00000473924 MAN1A2O60476 641 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 ITGA10O75578 1167 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 WDPCPO95876 746 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 GPC1P35052 558 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 CD97P48960 835 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 ST13P50502 369 aaKnown RBP11.53□□□□□ -0.56
DDX56-209ENST00000473924 DIO3P55073 304 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 SLC37A1P57057 533 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 MLF1P58340 268 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 FUT7Q11130 342 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 CEBPEQ15744 281 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 PRSS53Q2L4Q9 553 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 NADK2Q4G0N4 442 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 SLC9B1Q4ZJI4 515 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 COLEC12Q5KU26 742 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 HLA-DQA1Q5Y7H0 255 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 RGS9BPQ6ZS82 235 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 ACAD11Q709F0 780 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 SPATA19Q7Z5L4 167 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 TMEM156Q8N614 296 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 KRTCAP2Q8N6L1 136 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 RBMXL3Q8N7X1 1067 aaKnown RBP11.53□□□□□ -0.56
DDX56-209ENST00000473924 OR7G1Q8NGA0 311 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 OR9A2Q8NGT5 310 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 CEP70Q8NHQ1 597 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 ZFP28Q8NHY6 868 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 HAS2Q92819 552 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 KAT2AQ92830 837 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 ZNF764Q96H86 408 aaPredicted RBP11.53□□□□□ -0.56
DDX56-209ENST00000473924 GAL3ST4Q96RP7 486 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 NPAS2Q99743 824 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 DPY30Q9C005 99 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 RNF32Q9H0A6 362 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 OR10A5Q9H207 317 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 GLIPR2Q9H4G4 154 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 LIN28AQ9H9Z2 209 aaKnown RBP11.53□□□□□ -0.56
DDX56-209ENST00000473924 SLAMF7Q9NQ25 335 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 ATAD3AQ9NVI7 634 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 ANKRD10Q9NXR5 420 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 MYOTQ9UBF9 498 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 ANAPC2Q9UJX6 822 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 MAPRE3Q9UPY8 281 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 B3GNT3Q9Y2A9 372 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms