RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 CYP2A7P20853 494 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 SSTR1P30872 391 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 ADARP55265 1226 aaKnown RBP3.8□□□□□ -1.8
CNOT4-209ENST00000473470 PAX9P55771 341 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 CLDN17P56750 224 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 BACE1P56817 501 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 GSCP56915 257 aaPredicted RBP3.8□□□□□ -1.8
CNOT4-209ENST00000473470 SLC8A3P57103 927 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 FKBP1AP62942 108 aaKnown RBP3.8□□□□□ -1.8
CNOT4-209ENST00000473470 CYCSP99999 105 aaKnown RBP3.8□□□□□ -1.8
CNOT4-209ENST00000473470 UBXN1Q04323 297 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 TRIM29Q14134 588 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 EXT1Q16394 746 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 PLBD1Q6P4A8 553 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 SLC25A47Q6Q0C1 308 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 RAPH1Q70E73 1250 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 LRRTM1Q86UE6 522 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 CCDC83Q8IWF9 413 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 AQP12AQ8IXF9 295 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 UBALD2Q8IYN6 164 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 FAM89BQ8N5H3 189 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 APOBEC4Q8WW27 367 aaKnown RBP3.8□□□□□ -1.8
CNOT4-209ENST00000473470 CABS1Q96KC9 395 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 CCDC43Q96MW1 224 aaKnown RBP3.8□□□□□ -1.8
CNOT4-209ENST00000473470 PANX3Q96QZ0 392 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 LPAR4Q99677 370 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 C17orf62Q9BQA9 187 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 PIGQQ9BRB3 760 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 PI4K2AQ9BTU6 479 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 SLC5A7Q9GZV3 580 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 ATP13A3Q9H7F0 1226 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 RNF121Q9H920 327 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 PANK3Q9H999 370 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 MID1IP1Q9NPA3 183 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 MRPL17Q9NRX2 175 aaKnown RBP3.8□□□□□ -1.8
CNOT4-209ENST00000473470 PDRG1Q9NUG6 133 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 EXOC1Q9NV70 894 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 CWC25Q9NXE8 425 aaPredicted RBP3.8□□□□□ -1.8
CNOT4-209ENST00000473470 MTF2Q9Y483 593 aaPredicted RBP3.8□□□□□ -1.8
CNOT4-209ENST00000473470 SNX5Q9Y5X3 404 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 DOCK8Q8NF50 2099 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 TANC1Q9C0D5 1861 aa3.79□□□□□ -1.8
CNOT4-209ENST00000473470 SALL1Q9NSC2 1324 aa3.79□□□□□ -1.8
CNOT4-209ENST00000473470 A0A1B0GUL7 405 aa3.79□□□□□ -1.8
CNOT4-209ENST00000473470 MTMR11A4FU01 709 aa3.79□□□□□ -1.8
CNOT4-209ENST00000473470 TRIM64A6NGJ6 449 aa3.79□□□□□ -1.8
CNOT4-209ENST00000473470 TRIM64BA6NI03 449 aa3.79□□□□□ -1.8
CNOT4-209ENST00000473470 KRTAP16-1A8MUX0 517 aa3.79□□□□□ -1.8
CNOT4-209ENST00000473470 ATP9AO75110 1047 aa3.79□□□□□ -1.8
CNOT4-209ENST00000473470 SEC24AO95486 1093 aa3.79□□□□□ -1.8
CNOT4-209ENST00000473470 PNPP00491 289 aa3.79□□□□□ -1.8
CNOT4-209ENST00000473470 PCCAP05165 728 aaPredicted RBP3.79□□□□□ -1.8
CNOT4-209ENST00000473470 DLATP10515 647 aaKnown RBP3.79□□□□□ -1.8
CNOT4-209ENST00000473470 RBMS1P29558 406 aaKnown RBP3.79□□□□□ -1.8
CNOT4-209ENST00000473470 MMP12P39900 470 aa3.79□□□□□ -1.8
CNOT4-209ENST00000473470 KIAA1024LP59773 190 aa3.79□□□□□ -1.8
CNOT4-209ENST00000473470 RPP38P78345 283 aaKnown RBP3.79□□□□□ -1.8
CNOT4-209ENST00000473470 AKAP17AQ02040 695 aaKnown RBP3.79□□□□□ -1.8
CNOT4-209ENST00000473470 CETN1Q12798 172 aa3.79□□□□□ -1.8
CNOT4-209ENST00000473470 LASP1Q14847 261 aaKnown RBP3.79□□□□□ -1.8
CNOT4-209ENST00000473470 CDC37Q16543 378 aaPredicted RBP3.79□□□□□ -1.8
CNOT4-209ENST00000473470 ZNF74Q16587 644 aa3.79□□□□□ -1.8
CNOT4-209ENST00000473470 LRRC38Q5VT99 294 aa3.79□□□□□ -1.8
CNOT4-209ENST00000473470 TMEM270Q6UE05 265 aa3.79□□□□□ -1.8
CNOT4-209ENST00000473470 LEKR1Q6ZMV7 388 aa3.79□□□□□ -1.8
CNOT4-209ENST00000473470 FCRLAQ7L513 359 aa3.79□□□□□ -1.8
CNOT4-209ENST00000473470 HOGA1Q86XE5 327 aa3.79□□□□□ -1.8
CNOT4-209ENST00000473470 CROCCP3Q8IVE0 287 aa3.79□□□□□ -1.8
CNOT4-209ENST00000473470 NAT8LQ8N9F0 302 aa3.79□□□□□ -1.8
CNOT4-209ENST00000473470 KIAA0895Q8NCT3 520 aa3.79□□□□□ -1.8
CNOT4-209ENST00000473470 GATAD1Q8WUU5 269 aa3.79□□□□□ -1.8
CNOT4-209ENST00000473470 ARHGAP45Q92619 1136 aa3.79□□□□□ -1.8
CNOT4-209ENST00000473470 KRT35Q92764 455 aa3.79□□□□□ -1.8
CNOT4-209ENST00000473470 ANKRD9Q96BM1 317 aaPredicted RBP3.79□□□□□ -1.8
CNOT4-209ENST00000473470 PRMT1Q99873 361 aaKnown RBP3.79□□□□□ -1.8
CNOT4-209ENST00000473470 ALKBH7Q9BT30 221 aaPredicted RBP3.79□□□□□ -1.8
CNOT4-209ENST00000473470 CABLES2Q9BTV7 478 aa3.79□□□□□ -1.8
CNOT4-209ENST00000473470 DGCR6LQ9BY27 220 aa3.79□□□□□ -1.8
CNOT4-209ENST00000473470 PUS3Q9BZE2 481 aaKnown RBP3.79□□□□□ -1.8
CNOT4-209ENST00000473470 RAB9BQ9NP90 201 aa3.79□□□□□ -1.8
CNOT4-209ENST00000473470 SPG21Q9NZD8 308 aa3.79□□□□□ -1.8
CNOT4-209ENST00000473470 TRPC4Q9UBN4 977 aa3.79□□□□□ -1.8
CNOT4-209ENST00000473470 SLC12A6Q9UHW9 1150 aa3.79□□□□□ -1.8
CNOT4-209ENST00000473470 FBXL4Q9UKA2 621 aa3.79□□□□□ -1.8
CNOT4-209ENST00000473470 PILRBQ9UKJ0 227 aa3.79□□□□□ -1.8
CNOT4-209ENST00000473470 PRDM4Q9UKN5 801 aa3.79□□□□□ -1.8
CNOT4-209ENST00000473470 ELF5Q9UKW6 265 aaPredicted RBP3.79□□□□□ -1.8
CNOT4-209ENST00000473470 PPP1R3CQ9UQK1 317 aa3.79□□□□□ -1.8
CNOT4-209ENST00000473470 PPP2R2CQ9Y2T4 447 aa3.79□□□□□ -1.8
CNOT4-209ENST00000473470 COL5A1P20908 1838 aaPredicted RBP3.79□□□□□ -1.8
CNOT4-209ENST00000473470 MYH3P11055 1940 aa3.78□□□□□ -1.8
CNOT4-209ENST00000473470 UTP20O75691 2785 aaKnown RBP3.78□□□□□ -1.8
CNOT4-209ENST00000473470 CACNA1DQ01668 2161 aa3.78□□□□□ -1.8
CNOT4-209ENST00000473470 A0A087WUV0 522 aaPredicted RBP3.78□□□□□ -1.8
CNOT4-209ENST00000473470 SPAARA0A1B0GVQ0 90 aa3.78□□□□□ -1.8
CNOT4-209ENST00000473470 C15orf61A6NNL5 157 aa3.78□□□□□ -1.8
CNOT4-209ENST00000473470 H0YIG0 161 aa3.78□□□□□ -1.8
CNOT4-209ENST00000473470 H3BMM5 538 aa3.78□□□□□ -1.8
CNOT4-209ENST00000473470 DDX39AO00148 427 aaKnown RBP3.78□□□□□ -1.8
CNOT4-209ENST00000473470 CRCPO75575 148 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms