RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 SLC35A5Q9BS91 424 aa7.78□□□□□ -1.16
BRCA1-208ENST00000468300 SPRTNQ9H040 489 aaPredicted RBP7.78□□□□□ -1.16
BRCA1-208ENST00000468300 MUC13Q9H3R2 512 aa7.78□□□□□ -1.16
BRCA1-208ENST00000468300 LYRM4Q9HD34 91 aa7.78□□□□□ -1.16
BRCA1-208ENST00000468300 ARMC1Q9NVT9 282 aa7.78□□□□□ -1.16
BRCA1-208ENST00000468300 ZNF282Q9UDV7 671 aaPredicted RBP7.78□□□□□ -1.16
BRCA1-208ENST00000468300 NCOR1O75376 2440 aa7.78□□□□□ -1.16
BRCA1-208ENST00000468300 NUP210LQ5VU65 1888 aa7.78□□□□□ -1.16
BRCA1-208ENST00000468300 ELOVL7A1L3X0 281 aa7.77□□□□□ -1.16
BRCA1-208ENST00000468300 FAM227AF5H4B4 570 aa7.77□□□□□ -1.16
BRCA1-208ENST00000468300 SGK494L7N484 410 aa7.77□□□□□ -1.16
BRCA1-208ENST00000468300 PCDHGA12O60330 932 aa7.77□□□□□ -1.16
BRCA1-208ENST00000468300 SLC7A1P30825 629 aa7.77□□□□□ -1.16
BRCA1-208ENST00000468300 NUBP1P53384 320 aa7.77□□□□□ -1.16
BRCA1-208ENST00000468300 GPLD1P80108 840 aa7.77□□□□□ -1.16
BRCA1-208ENST00000468300 ACY1Q03154 408 aa7.77□□□□□ -1.16
BRCA1-208ENST00000468300 RUNX1T1Q06455 604 aa7.77□□□□□ -1.16
BRCA1-208ENST00000468300 USP53Q70EK8 1073 aa7.77□□□□□ -1.16
BRCA1-208ENST00000468300 ABHD13Q7L211 337 aa7.77□□□□□ -1.16
BRCA1-208ENST00000468300 PRSS42Q7Z5A4 293 aa7.77□□□□□ -1.16
BRCA1-208ENST00000468300 PROSER1Q86XN7 944 aa7.77□□□□□ -1.16
BRCA1-208ENST00000468300 D2HGDHQ8N465 521 aa7.77□□□□□ -1.16
BRCA1-208ENST00000468300 FAM26EQ8N5C1 309 aa7.77□□□□□ -1.16
BRCA1-208ENST00000468300 OR6C4Q8NGE1 309 aa7.77□□□□□ -1.16
BRCA1-208ENST00000468300 OR5P2Q8WZ92 322 aa7.77□□□□□ -1.16
BRCA1-208ENST00000468300 STMN2Q93045 179 aa7.77□□□□□ -1.16
BRCA1-208ENST00000468300 MAL2Q969L2 176 aa7.77□□□□□ -1.16
BRCA1-208ENST00000468300 CMTM3Q96MX0 182 aa7.77□□□□□ -1.16
BRCA1-208ENST00000468300 CD180Q99467 661 aa7.77□□□□□ -1.16
BRCA1-208ENST00000468300 DUSP23Q9BVJ7 150 aa7.77□□□□□ -1.16
BRCA1-208ENST00000468300 LYARQ9NX58 379 aaKnown RBP7.77□□□□□ -1.16
BRCA1-208ENST00000468300 PDP2Q9P2J9 529 aa7.77□□□□□ -1.16
BRCA1-208ENST00000468300 VPS4AQ9UN37 437 aa7.77□□□□□ -1.16
BRCA1-208ENST00000468300 SLC6A14Q9UN76 642 aa7.77□□□□□ -1.16
BRCA1-208ENST00000468300 HCN4Q9Y3Q4 1203 aa7.77□□□□□ -1.16
BRCA1-208ENST00000468300 PRAMEF27A3QJZ7 478 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 TGFBR3LH3BV60 316 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 SRPX2O60687 465 aaPredicted RBP7.77□□□□□ -1.17
BRCA1-208ENST00000468300 ZBTB11O95625 1053 aaPredicted RBP7.77□□□□□ -1.17
BRCA1-208ENST00000468300 ANP32DO95626 131 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 SEMG1P04279 462 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 C8orf89P0DMQ9 161 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 ETFAP13804 333 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 FOLR1P15328 257 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 RELQ04864 619 aaPredicted RBP7.77□□□□□ -1.17
BRCA1-208ENST00000468300 AMZ1Q400G9 498 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 ENPP6Q6UWR7 440 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 SPATA24Q86W54 205 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 CARFQ8N187 725 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 EID2Q8N6I1 236 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 SIMC1Q8NDZ2 872 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 OR9A4Q8NGU2 314 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 NEURL3Q96EH8 262 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 ZDHHC12Q96GR4 267 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 KLHL3Q9UH77 587 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 ATXN7L1Q9ULK2 861 aaPredicted RBP7.77□□□□□ -1.17
BRCA1-208ENST00000468300 CXCR6O00574 342 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 BMP2P12643 396 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 PRKACAP17612 351 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 UQCRC2P22695 453 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 EFNA3P52797 238 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 POLE2P56282 527 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 CCL7P80098 99 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 HSPB3Q12988 150 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 NR0B2Q15466 257 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 ZFP1Q6P2D0 407 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 LRRC74BQ6ZQY2 392 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 OR52N2Q8NGI0 321 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 ANKRD9Q96BM1 317 aaPredicted RBP7.77□□□□□ -1.17
BRCA1-208ENST00000468300 ARRDC1-AS1Q9H2J1 176 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 EPB41L1Q9H4G0 881 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 ZNF768Q9H5H4 540 aaKnown RBP7.77□□□□□ -1.17
BRCA1-208ENST00000468300 ANKRA2Q9H9E1 313 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 PRM3Q9NNZ6 103 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 PRDM9Q9NQV7 894 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 DCAF13Q9NV06 445 aaKnown RBP7.77□□□□□ -1.17
BRCA1-208ENST00000468300 MAGEL2Q9UJ55 1249 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 PLCL2Q9UPR0 1127 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 CABIN1Q9Y6J0 2220 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 ZNF318Q5VUA4 2279 aa7.77□□□□□ -1.17
BRCA1-208ENST00000468300 HTR3EA5X5Y0 456 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 CREG1O75629 220 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 NTRK1P04629 796 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 CKMT1AP12532 417 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 SIM1P81133 766 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-208ENST00000468300 GPR19Q15760 415 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 VMACQ2NL98 169 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 PRAMEF17Q5VTA0 474 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 LPCAT4Q643R3 524 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 GALNT10Q86SR1 603 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 RNF130Q86XS8 419 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 PQLC1Q8N2U9 271 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 NATD1Q8N6N6 113 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 OR1L3Q8NH93 324 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 LRTOMTQ8WZ04 291 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 FAM120BQ96EK7 910 aaKnown RBP7.76□□□□□ -1.17
BRCA1-208ENST00000468300 COPS7BQ9H9Q2 264 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-208ENST00000468300 C8orf4Q9NR00 106 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 ZMIZ1Q9ULJ6 1067 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 AP4S1Q9Y587 144 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms