RNA–Protein interactions for RNA: ENST00000463632.1

RPA3-206, Transcript of replication protein A3, humanhuman

TSL 5

Gene RPA3, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-206ENST00000463632 LIME1Q9H400 295 aa11.32□□□□□ -0.6
RPA3-206ENST00000463632 METTL7AQ9H8H3 244 aa11.32□□□□□ -0.6
RPA3-206ENST00000463632 IPPKQ9H8X2 491 aa11.32□□□□□ -0.6
RPA3-206ENST00000463632 ACKR4Q9NPB9 350 aa11.32□□□□□ -0.6
RPA3-206ENST00000463632 SNX15Q9NRS6 342 aa11.32□□□□□ -0.6
RPA3-206ENST00000463632 IGSF5Q9NSI5 407 aa11.32□□□□□ -0.6
RPA3-206ENST00000463632 QPCTLQ9NXS2 382 aa11.32□□□□□ -0.6
RPA3-206ENST00000463632 CNOT11Q9UKZ1 510 aaKnown RBP11.32□□□□□ -0.6
RPA3-206ENST00000463632 SLC6A5Q9Y345 797 aa11.32□□□□□ -0.6
RPA3-206ENST00000463632 CHCHD2Q9Y6H1 151 aaPredicted RBP11.32□□□□□ -0.6
RPA3-206ENST00000463632 GNB5O14775 395 aa11.31□□□□□ -0.6
RPA3-206ENST00000463632 CTAG2O75638 210 aa11.31□□□□□ -0.6
RPA3-206ENST00000463632 SLC35E2P0CK97 266 aa11.31□□□□□ -0.6
RPA3-206ENST00000463632 GCKP35557 465 aa11.31□□□□□ -0.6
RPA3-206ENST00000463632 DEKP35659 375 aaKnown RBP11.31□□□□□ -0.6
RPA3-206ENST00000463632 PEX19P40855 299 aa11.31□□□□□ -0.6
RPA3-206ENST00000463632 ASCL1P50553 236 aa11.31□□□□□ -0.6
RPA3-206ENST00000463632 AGFG1P52594 562 aaKnown RBP11.31□□□□□ -0.6
RPA3-206ENST00000463632 ALDH18A1P54886 795 aaKnown RBP11.31□□□□□ -0.6
RPA3-206ENST00000463632 SLC37A1P57057 533 aa11.31□□□□□ -0.6
RPA3-206ENST00000463632 CAV1Q03135 178 aa11.31□□□□□ -0.6
RPA3-206ENST00000463632 GTF3C1Q12789 2109 aa11.31□□□□□ -0.6
RPA3-206ENST00000463632 GTF2H2Q13888 395 aa11.31□□□□□ -0.6
RPA3-206ENST00000463632 RPS6KA2Q15349 733 aa11.31□□□□□ -0.6
RPA3-206ENST00000463632 SF3B4Q15427 424 aaKnown RBP eCLIP11.31□□□□□ -0.6
RPA3-206ENST00000463632 NNATQ16517 81 aa11.31□□□□□ -0.6
RPA3-206ENST00000463632 BICRALQ6AI39 1079 aa11.31□□□□□ -0.6
RPA3-206ENST00000463632 OR52E8Q6IFG1 317 aa11.31□□□□□ -0.6
RPA3-206ENST00000463632 GTF2H2CQ6P1K8 395 aa11.31□□□□□ -0.6
RPA3-206ENST00000463632 LYPD8Q6UX82 237 aa11.31□□□□□ -0.6
RPA3-206ENST00000463632 CYS1Q717R9 158 aa11.31□□□□□ -0.6
RPA3-206ENST00000463632 GOLGA7Q7Z5G4 137 aa11.31□□□□□ -0.6
RPA3-206ENST00000463632 NUDT13Q86X67 352 aa11.31□□□□□ -0.6
RPA3-206ENST00000463632 GALNT12Q8IXK2 581 aa11.31□□□□□ -0.6
RPA3-206ENST00000463632 PM20D2Q8IYS1 436 aa11.31□□□□□ -0.6
RPA3-206ENST00000463632 SPATA4Q8NEY3 305 aa11.31□□□□□ -0.6
RPA3-206ENST00000463632 TNIP2Q8NFZ5 429 aa11.31□□□□□ -0.6
RPA3-206ENST00000463632 OR4K14Q8NGD5 310 aa11.31□□□□□ -0.6
RPA3-206ENST00000463632 UCN3Q969E3 161 aa11.31□□□□□ -0.6
RPA3-206ENST00000463632 HSPBAP1Q96EW2 488 aa11.31□□□□□ -0.6
RPA3-206ENST00000463632 GNRHR2Q96P88 292 aa11.31□□□□□ -0.6
RPA3-206ENST00000463632 RAB17Q9H0T7 212 aa11.31□□□□□ -0.6
RPA3-206ENST00000463632 TEX10Q9NXF1 929 aaPredicted RBP11.31□□□□□ -0.6
RPA3-206ENST00000463632 GRHL1Q9NZI5 618 aa11.31□□□□□ -0.6
RPA3-206ENST00000463632 BCAP29Q9UHQ4 241 aa11.31□□□□□ -0.6
RPA3-206ENST00000463632 ST6GALNAC2Q9UJ37 374 aa11.31□□□□□ -0.6
RPA3-206ENST00000463632 RNF11Q9Y3C5 154 aa11.31□□□□□ -0.6
RPA3-206ENST00000463632 NPFFR2Q9Y5X5 522 aa11.31□□□□□ -0.6
RPA3-206ENST00000463632 ANKRD17O75179 2603 aaKnown RBP11.31□□□□□ -0.6
RPA3-206ENST00000463632 CACNA1CQ13936 2221 aa11.31□□□□□ -0.6
RPA3-206ENST00000463632 A0A096LPK6 155 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 A0A0A6YYD5 115 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 TUBAL3A6NHL2 446 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 PGRMC2O15173 223 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 SNX4O95219 450 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 SIX3O95343 332 aaPredicted RBP11.3□□□□□ -0.6
RPA3-206ENST00000463632 C1QAP02745 245 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 C2P06681 752 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 KLK1P06870 262 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 KLK2P20151 261 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 TACR1P25103 407 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 TYK2P29597 1187 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 CASQ1P31415 396 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 BSGP35613 385 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 XKP51811 444 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 CCNG1P51959 295 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 PCDH1Q08174 1060 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 IFT88Q13099 833 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 NAB1Q13506 487 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 CUL3Q13618 768 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 ACAP2Q15057 778 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 NTRK2Q16620 822 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 SPRED3Q2MJR0 410 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 ACSF3Q4G176 576 aaPredicted RBP11.3□□□□□ -0.6
RPA3-206ENST00000463632 FLYWCH1Q4VC44 716 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 ADGRD1Q6QNK2 874 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 FBXO25Q8TCJ0 367 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 FAM222BQ8WU58 562 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 NINJ1Q92982 152 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 RNASE6Q93091 150 aaKnown RBP11.3□□□□□ -0.6
RPA3-206ENST00000463632 PHF21BQ96EK2 531 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 CDK15Q96Q40 435 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 SERPINI1Q99574 410 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 TIMP4Q99727 224 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 FOXC2Q99958 501 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 BRINP2Q9C0B6 783 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 NOL11Q9H8H0 719 aaKnown RBP11.3□□□□□ -0.6
RPA3-206ENST00000463632 DDX31Q9H8H2 851 aaKnown RBP11.3□□□□□ -0.6
RPA3-206ENST00000463632 PROK2Q9HC23 129 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 SH2D2AQ9NP31 389 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 PFDN4Q9NQP4 134 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 RASSF1Q9NS23 344 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 AHSPQ9NZD4 102 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 ASB4Q9Y574 426 aa11.3□□□□□ -0.6
RPA3-206ENST00000463632 TNPO3Q9Y5L0 923 aaKnown RBP11.3□□□□□ -0.6
RPA3-206ENST00000463632 ADGRG4Q8IZF6 3080 aa11.29□□□□□ -0.6
RPA3-206ENST00000463632 A0A1W2PS29 197 aa11.29□□□□□ -0.6
RPA3-206ENST00000463632 A6NNC1 897 aa11.29□□□□□ -0.6
RPA3-206ENST00000463632 H0YIV9 168 aa11.29□□□□□ -0.6
RPA3-206ENST00000463632 SYT5O00445 386 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms