RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 SCN2AQ99250 2005 aa14.64□□□□□ -0.07
LMNB1-203ENST00000460265 NDUFS4O43181 175 aa14.64□□□□□ -0.07
LMNB1-203ENST00000460265 ITGA2P17301 1181 aa14.64□□□□□ -0.07
LMNB1-203ENST00000460265 ISL1P61371 349 aa14.64□□□□□ -0.07
LMNB1-203ENST00000460265 MADCAM1Q13477 382 aa14.64□□□□□ -0.07
LMNB1-203ENST00000460265 CAMK1Q14012 370 aa14.64□□□□□ -0.07
LMNB1-203ENST00000460265 LRRC32Q14392 662 aa14.64□□□□□ -0.07
LMNB1-203ENST00000460265 ATAT1Q5SQI0 421 aa14.64□□□□□ -0.07
LMNB1-203ENST00000460265 MEX3DQ86XN8 651 aaKnown RBP14.64□□□□□ -0.07
LMNB1-203ENST00000460265 AQP11Q8NBQ7 271 aa14.64□□□□□ -0.07
LMNB1-203ENST00000460265 SEMA3GQ9NS98 782 aa14.64□□□□□ -0.07
LMNB1-203ENST00000460265 PCDHGA10Q9Y5H3 936 aa14.64□□□□□ -0.07
LMNB1-203ENST00000460265 CACNA1CQ13936 2221 aa14.63□□□□□ -0.07
LMNB1-203ENST00000460265 MEIOCA2RUB1 952 aa14.63□□□□□ -0.07
LMNB1-203ENST00000460265 ATP6V1E1P36543 226 aa14.63□□□□□ -0.07
LMNB1-203ENST00000460265 PBX2P40425 430 aa14.63□□□□□ -0.07
LMNB1-203ENST00000460265 SLC19A1P41440 591 aa14.63□□□□□ -0.07
LMNB1-203ENST00000460265 CCT3P49368 545 aaKnown RBP14.63□□□□□ -0.07
LMNB1-203ENST00000460265 RNF144AP50876 292 aaPredicted RBP14.63□□□□□ -0.07
LMNB1-203ENST00000460265 NCBP2P52298 156 aaKnown RBP eCLIP14.63□□□□□ -0.072e-6■□□□□ 9.8
LMNB1-203ENST00000460265 SELENOWP63302 87 aa14.63□□□□□ -0.07
LMNB1-203ENST00000460265 RAE1P78406 368 aaKnown RBP14.63□□□□□ -0.07
LMNB1-203ENST00000460265 SLAMF1Q13291 335 aa14.63□□□□□ -0.07
LMNB1-203ENST00000460265 LASP1Q14847 261 aaKnown RBP14.63□□□□□ -0.07
LMNB1-203ENST00000460265 ENPP7Q6UWV6 458 aa14.63□□□□□ -0.07
LMNB1-203ENST00000460265 OR5D16Q8NGK9 328 aa14.63□□□□□ -0.07
LMNB1-203ENST00000460265 DEDD2Q8WXF8 326 aa14.63□□□□□ -0.07
LMNB1-203ENST00000460265 COQ10AQ96MF6 247 aa14.63□□□□□ -0.07
LMNB1-203ENST00000460265 RDH12Q96NR8 316 aa14.63□□□□□ -0.07
LMNB1-203ENST00000460265 QRFPRQ96P65 431 aa14.63□□□□□ -0.07
LMNB1-203ENST00000460265 RLIMQ9NVW2 624 aa14.63□□□□□ -0.07
LMNB1-203ENST00000460265 ZNF639Q9UID6 485 aa14.63□□□□□ -0.07
LMNB1-203ENST00000460265 SNX11Q9Y5W9 270 aa14.63□□□□□ -0.07
LMNB1-203ENST00000460265 DOCK9Q9BZ29 2069 aa14.63□□□□□ -0.07
LMNB1-203ENST00000460265 ASCC3Q8N3C0 2202 aaKnown RBP14.63□□□□□ -0.07
LMNB1-203ENST00000460265 GSAPA4D1B5 854 aa14.63□□□□□ -0.07
LMNB1-203ENST00000460265 METTL15A6NJ78 407 aa14.63□□□□□ -0.07
LMNB1-203ENST00000460265 PCDH17O14917 1159 aa14.63□□□□□ -0.07
LMNB1-203ENST00000460265 OR12D1P0DN82 309 aa14.63□□□□□ -0.07
LMNB1-203ENST00000460265 CLDN2P57739 230 aa14.63□□□□□ -0.07
LMNB1-203ENST00000460265 TAB1Q15750 504 aa14.63□□□□□ -0.07
LMNB1-203ENST00000460265 C9orf50Q5SZB4 431 aa14.63□□□□□ -0.07
LMNB1-203ENST00000460265 LSM14AQ8ND56 463 aaKnown RBP14.63□□□□□ -0.07
LMNB1-203ENST00000460265 OR8K5Q8NH50 307 aa14.63□□□□□ -0.07
LMNB1-203ENST00000460265 MRPS30Q9NP92 439 aaKnown RBP14.63□□□□□ -0.07
LMNB1-203ENST00000460265 GULP1Q9UBP9 304 aa14.63□□□□□ -0.07
LMNB1-203ENST00000460265 ZMAT5Q9UDW3 170 aaKnown RBP14.63□□□□□ -0.07
LMNB1-203ENST00000460265 I3L521 148 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 CACNB4O00305 520 aaPredicted RBP14.62□□□□□ -0.07
LMNB1-203ENST00000460265 VEGFDO43915 354 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 GPR37L1O60883 481 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 NAGAP17050 411 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 MRPL19P49406 292 aaKnown RBP14.62□□□□□ -0.07
LMNB1-203ENST00000460265 ERVK-21P61565 698 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 ZNF267Q14586 743 aaPredicted RBP14.62□□□□□ -0.07
LMNB1-203ENST00000460265 PLEKHM3Q6ZWE6 761 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 PRSS48Q7RTY5 328 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 C6orf120Q7Z4R8 191 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 OXR1Q8N573 874 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 CHCHD6Q9BRQ6 235 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 RPP25Q9BUL9 199 aaKnown RBP14.62□□□□□ -0.07
LMNB1-203ENST00000460265 BTBD2Q9BX70 525 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 ACOXLQ9NUZ1 547 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 MKLN1Q9UL63 735 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 HMX3A6NHT5 357 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 RASGRP1O95267 797 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 AP2S1P53680 142 aaPredicted RBP14.62□□□□□ -0.07
LMNB1-203ENST00000460265 EIF4HQ15056 248 aaKnown RBP14.62□□□□□ -0.07
LMNB1-203ENST00000460265 PRSS36Q5K4E3 855 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 C1orf53Q5VUE5 145 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 ZNF691Q5VV52 312 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 B3GNT8Q7Z7M8 397 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 NUDT13Q86X67 352 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 CALHM3Q86XJ0 350 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 TBC1D19Q8N5T2 526 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 CHAC2Q8WUX2 184 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 LCN9Q8WX39 176 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 RIPOR3Q96MK2 946 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 TRNT1Q96Q11 434 aaKnown RBP14.62□□□□□ -0.07
LMNB1-203ENST00000460265 SERGEFQ9UGK8 458 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 ENTPD4Q9Y227 616 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 GRIP1Q9Y3R0 1128 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 TRBV5-3A0A0A0MS03 114 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 A8MUA0 341 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 TNFRSF21O75509 655 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 FURINP09958 794 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 AZGP1P25311 298 aaKnown RBP14.62□□□□□ -0.07
LMNB1-203ENST00000460265 NTSP30990 170 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 TARDBPQ13148 414 aaKnown RBP eCLIP14.62□□□□□ -0.072e-7■■■□□ 18.4
LMNB1-203ENST00000460265 LEXMQ3ZCV2 418 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 KHDRBS2Q5VWX1 349 aaKnown RBP14.62□□□□□ -0.07
LMNB1-203ENST00000460265 CASP12Q6UXS9 341 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 WDR53Q7Z5U6 358 aaPredicted RBP14.62□□□□□ -0.07
LMNB1-203ENST00000460265 TMIEQ8NEW7 156 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 RGMAQ96B86 450 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 SMAD5Q99717 465 aaKnown RBP14.62□□□□□ -0.07
LMNB1-203ENST00000460265 PEX16Q9Y5Y5 336 aa14.62□□□□□ -0.07
LMNB1-203ENST00000460265 ZNF780AO75290 641 aaPredicted RBP14.61□□□□□ -0.07
LMNB1-203ENST00000460265 CCNB2O95067 398 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 ACTR1BP42025 376 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms