RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 HMGA2P52926 109 aa17.16■□□□□ 0.34
HPS3-202ENST00000460120 HOXC5Q00444 222 aa17.16■□□□□ 0.34
HPS3-202ENST00000460120 SLAMF1Q13291 335 aa17.16■□□□□ 0.34
HPS3-202ENST00000460120 EIF4HQ15056 248 aaKnown RBP17.16■□□□□ 0.34
HPS3-202ENST00000460120 CST6Q15828 149 aa17.16■□□□□ 0.34
HPS3-202ENST00000460120 GPAT3Q53EU6 434 aa17.16■□□□□ 0.34
HPS3-202ENST00000460120 CASP12Q6UXS9 341 aa17.16■□□□□ 0.34
HPS3-202ENST00000460120 AMER2Q8N7J2 671 aa17.16■□□□□ 0.34
HPS3-202ENST00000460120 APOBEC4Q8WW27 367 aaKnown RBP17.16■□□□□ 0.34
HPS3-202ENST00000460120 PLA2G2FQ9BZM2 168 aa17.16■□□□□ 0.34
HPS3-202ENST00000460120 TPK1Q9H3S4 243 aa17.16■□□□□ 0.34
HPS3-202ENST00000460120 WASH6PQ9NQA3 447 aa17.16■□□□□ 0.34
HPS3-202ENST00000460120 REV1Q9UBZ9 1251 aa17.16■□□□□ 0.34
HPS3-202ENST00000460120 STON1Q9Y6Q2 735 aa17.16■□□□□ 0.34
HPS3-202ENST00000460120 AP1M2Q9Y6Q5 423 aa17.16■□□□□ 0.34
HPS3-202ENST00000460120 HAT1O14929 419 aa17.15■□□□□ 0.34
HPS3-202ENST00000460120 TLX2O43763 284 aaPredicted RBP17.15■□□□□ 0.34
HPS3-202ENST00000460120 KDM1AO60341 852 aa17.15■□□□□ 0.34
HPS3-202ENST00000460120 S100A5P33763 92 aa17.15■□□□□ 0.34
HPS3-202ENST00000460120 EIF2DP41214 584 aaKnown RBP17.15■□□□□ 0.34
HPS3-202ENST00000460120 RNF144AP50876 292 aaPredicted RBP17.15■□□□□ 0.34
HPS3-202ENST00000460120 PPP5CP53041 499 aa17.15■□□□□ 0.34
HPS3-202ENST00000460120 STEAP3Q658P3 488 aa17.15■□□□□ 0.34
HPS3-202ENST00000460120 PGBD2Q6P3X8 592 aa17.15■□□□□ 0.34
HPS3-202ENST00000460120 PODNL1Q6PEZ8 512 aa17.15■□□□□ 0.34
HPS3-202ENST00000460120 RD3Q7Z3Z2 195 aa17.15■□□□□ 0.34
HPS3-202ENST00000460120 IQCHQ86VS3 1027 aa17.15■□□□□ 0.34
HPS3-202ENST00000460120 CAMK1GQ96NX5 476 aa17.15■□□□□ 0.34
HPS3-202ENST00000460120 ZNF607Q96SK3 696 aa17.15■□□□□ 0.34
HPS3-202ENST00000460120 SLX1AQ9BQ83 275 aa17.15■□□□□ 0.34
HPS3-202ENST00000460120 SYNPO2LQ9H987 977 aa17.15■□□□□ 0.34
HPS3-202ENST00000460120 ATG4BQ9Y4P1 393 aa17.15■□□□□ 0.34
HPS3-202ENST00000460120 AGAP5A6NIR3 686 aa17.15■□□□□ 0.34
HPS3-202ENST00000460120 SLC31A1O15431 190 aa17.15■□□□□ 0.34
HPS3-202ENST00000460120 OSMP13725 252 aa17.15■□□□□ 0.34
HPS3-202ENST00000460120 KCNJ5P48544 419 aa17.15■□□□□ 0.34
HPS3-202ENST00000460120 PXNP49023 591 aaPredicted RBP17.15■□□□□ 0.34
HPS3-202ENST00000460120 RPA4Q13156 261 aa17.15■□□□□ 0.34
HPS3-202ENST00000460120 GPM6BQ13491 265 aa17.15■□□□□ 0.34
HPS3-202ENST00000460120 ELOAQ14241 798 aaKnown RBP17.15■□□□□ 0.34
HPS3-202ENST00000460120 PLAG1Q6DJT9 500 aa17.15■□□□□ 0.34
HPS3-202ENST00000460120 FBXL6Q8N531 539 aa17.15■□□□□ 0.34
HPS3-202ENST00000460120 ZNF354BQ96LW1 612 aa17.15■□□□□ 0.34
HPS3-202ENST00000460120 AMDHD1Q96NU7 426 aa17.15■□□□□ 0.34
HPS3-202ENST00000460120 SPHK1Q9NYA1 384 aa17.15■□□□□ 0.34
HPS3-202ENST00000460120 ZFR2Q9UPR6 939 aaKnown RBP17.15■□□□□ 0.34
HPS3-202ENST00000460120 EFCAB10A6NFE3 127 aa17.14■□□□□ 0.33
HPS3-202ENST00000460120 CTDSP2O14595 271 aa17.14■□□□□ 0.33
HPS3-202ENST00000460120 RGS5O15539 181 aa17.14■□□□□ 0.33
HPS3-202ENST00000460120 LRRTM2O43300 516 aa17.14■□□□□ 0.33
HPS3-202ENST00000460120 SEMA3DO95025 777 aa17.14■□□□□ 0.33
HPS3-202ENST00000460120 CERS1P27544 350 aa17.14■□□□□ 0.33
HPS3-202ENST00000460120 VASPP50552 380 aaPredicted RBP17.14■□□□□ 0.33
HPS3-202ENST00000460120 MLLT1Q03111 559 aaPredicted RBP17.14■□□□□ 0.33
HPS3-202ENST00000460120 MXD1Q05195 221 aa17.14■□□□□ 0.33
HPS3-202ENST00000460120 MAP4K2Q12851 820 aa17.14■□□□□ 0.33
HPS3-202ENST00000460120 SSX1Q16384 188 aa17.14■□□□□ 0.33
HPS3-202ENST00000460120 PARP16Q8N5Y8 322 aa17.14■□□□□ 0.33
HPS3-202ENST00000460120 KBTBD8Q8NFY9 601 aa17.14■□□□□ 0.33
HPS3-202ENST00000460120 OR6T1Q8NGN1 323 aa17.14■□□□□ 0.33
HPS3-202ENST00000460120 OR2A1Q8NGT9 310 aa17.14■□□□□ 0.33
HPS3-202ENST00000460120 OR14C36Q8NHC7 312 aa17.14■□□□□ 0.33
HPS3-202ENST00000460120 TMEM203Q969S6 136 aa17.14■□□□□ 0.33
HPS3-202ENST00000460120 QRFPRQ96P65 431 aa17.14■□□□□ 0.33
HPS3-202ENST00000460120 FNDC11Q9BVV2 318 aa17.14■□□□□ 0.33
HPS3-202ENST00000460120 HDAC8Q9BY41 377 aa17.14■□□□□ 0.33
HPS3-202ENST00000460120 MMP27Q9H306 513 aa17.14■□□□□ 0.33
HPS3-202ENST00000460120 WDR70Q9NW82 654 aa17.14■□□□□ 0.33
HPS3-202ENST00000460120 P2RX2Q9UBL9 471 aa17.14■□□□□ 0.33
HPS3-202ENST00000460120 KCND3Q9UK17 655 aa17.14■□□□□ 0.33
HPS3-202ENST00000460120 LINC00854A0A1B0GVQ3 168 aa17.14■□□□□ 0.33
HPS3-202ENST00000460120 LRIT2A6NDA9 550 aa17.14■□□□□ 0.33
HPS3-202ENST00000460120 SPNP16150 400 aa17.14■□□□□ 0.33
HPS3-202ENST00000460120 RAB15P59190 212 aa17.14■□□□□ 0.33
HPS3-202ENST00000460120 C2orf27AQ580R0 203 aa17.14■□□□□ 0.33
HPS3-202ENST00000460120 MLIPQ5VWP3 458 aa17.14■□□□□ 0.33
HPS3-202ENST00000460120 LYSMD2Q8IV50 215 aa17.14■□□□□ 0.33
HPS3-202ENST00000460120 C7orf61Q8IZ16 206 aa17.14■□□□□ 0.33
HPS3-202ENST00000460120 GPA33Q99795 319 aa17.14■□□□□ 0.33
HPS3-202ENST00000460120 KLHL25Q9H0H3 589 aa17.14■□□□□ 0.33
HPS3-202ENST00000460120 MRPS30Q9NP92 439 aaKnown RBP17.14■□□□□ 0.33
HPS3-202ENST00000460120 SLC35C2Q9NQQ7 365 aa17.14■□□□□ 0.33
HPS3-202ENST00000460120 C14orf119Q9NWQ9 140 aa17.14■□□□□ 0.33
HPS3-202ENST00000460120 GPR52Q9Y2T5 361 aa17.14■□□□□ 0.33
HPS3-202ENST00000460120 PCDHGA3Q9Y5H0 932 aa17.14■□□□□ 0.33
HPS3-202ENST00000460120 GPX5O75715 221 aa17.13■□□□□ 0.33
HPS3-202ENST00000460120 UPK1BO75841 260 aa17.13■□□□□ 0.33
HPS3-202ENST00000460120 HMGN2P05204 90 aaKnown RBP17.13■□□□□ 0.33
HPS3-202ENST00000460120 CHRM4P08173 479 aa17.13■□□□□ 0.33
HPS3-202ENST00000460120 TUBA1BP68363 451 aa17.13■□□□□ 0.33
HPS3-202ENST00000460120 RUNX3Q13761 415 aa17.13■□□□□ 0.33
HPS3-202ENST00000460120 TUBA1AQ71U36 451 aa17.13■□□□□ 0.33
HPS3-202ENST00000460120 ZBTB8BQ8NAP8 495 aaPredicted RBP17.13■□□□□ 0.33
HPS3-202ENST00000460120 OR52E1Q8NGJ3 308 aa17.13■□□□□ 0.33
HPS3-202ENST00000460120 ZG16BQ96DA0 208 aa17.13■□□□□ 0.33
HPS3-202ENST00000460120 INIPQ9NRY2 104 aa17.13■□□□□ 0.33
HPS3-202ENST00000460120 SCHIP1Q9P0W5 487 aaPredicted RBP17.13■□□□□ 0.33
HPS3-202ENST00000460120 THAP10Q9P2Z0 257 aaPredicted RBP17.13■□□□□ 0.33
HPS3-202ENST00000460120 CARD8Q9Y2G2 431 aa17.13■□□□□ 0.33
HPS3-202ENST00000460120 A0A1W2PR48 441 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms