RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 REEP1Q9H902 201 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 NTN4Q9HB63 628 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 CAPN10Q9HC96 672 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 SLAMF7Q9NQ25 335 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 PNPLA3Q9NST1 481 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 ZCCHC3Q9NUD5 404 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 SERTAD3Q9UJW9 196 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 GMEB2Q9UKD1 530 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 FAM32AQ9Y421 112 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 GPC6Q9Y625 555 aaPredicted RBP6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 AP4B1Q9Y6B7 739 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 RNF215Q9Y6U7 377 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 DSPPQ9NZW4 1301 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 TRBV23OR9-2A0A075B6M9 112 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 A0A1B0GVT2 93 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 HTR3EA5X5Y0 456 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 SLC9B1P1A6NJY1 282 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 HMGN4O00479 90 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 SLC16A6O15403 523 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 SH3BP5O60239 455 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 UGT2B11O75310 529 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 SH3BGRLO75368 114 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 PGM3O95394 542 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 SLC34A2O95436 690 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 THBS1P07996 1170 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 ETFAP13804 333 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 NELFEP18615 380 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 PRKAR1BP31321 381 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 IFNA8P32881 189 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 MAN2A2P49641 1150 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 VSX2P58304 361 aaPredicted RBP6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 RAB8AP61006 207 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 TUBA4AP68366 448 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 KCNJ10P78508 379 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 PPP2R2BQ00005 443 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 PLIN5Q00G26 463 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 MERTKQ12866 999 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 HSPB3Q12988 150 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 SLC14A1Q13336 389 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 TOP3AQ13472 1001 aaPredicted RBP6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 RUNX2Q13950 521 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 PDK3Q15120 406 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 ARHGAP11BQ3KRB8 267 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 SLC36A3Q495N2 470 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 KCTD21Q4G0X4 260 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 DEFB134Q4QY38 66 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 EIPR1Q53HC9 387 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 ZNF542PQ5EBM4 170 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 FRMPD2BQ6IN97 320 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 ENPP6Q6UWR7 440 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 AMIGO2Q86SJ2 522 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 TRIM73Q86UV7 250 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 CARM1Q86X55 608 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 CHERPQ8IWX8 916 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 ST13P4Q8IZP2 240 aaPredicted RBP6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 SLC25A45Q8N413 288 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 CBR4Q8N4T8 237 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 SETD9Q8NE22 299 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 OR4D9Q8NGE8 314 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 SLC38A5Q8WUX1 472 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 PROX1Q92786 737 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 TMBIM1Q969X1 311 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 HSH2DQ96JZ2 352 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 DHRS1Q96LJ7 313 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 CIB1Q99828 191 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 FAM117AQ9C073 453 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 FAM192AQ9GZU8 254 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 PIGUQ9H490 435 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 MTHFD2LQ9H903 347 aaPredicted RBP6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 DDX18Q9NVP1 670 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 FBXW2Q9UKT8 454 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 OAZ3Q9UMX2 235 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 CFL2Q9Y281 166 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 SLC9A8Q9Y2E8 581 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 NAALAD2Q9Y3Q0 740 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 SNX11Q9Y5W9 270 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 SNX8Q9Y5X2 465 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 ENPP4Q9Y6X5 453 aa6.43□□□□□ -1.38
ECHDC1-210ENST00000454859 ABCA7Q8IZY2 2146 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 LOC105369274A0A096LPK9 316 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 LOC102723532A0A0G2JNH3 316 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 EME2A4GXA9 379 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 C4orf51C9J302 202 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 PGRMC2O15173 223 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 DYRK3O43781 588 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 JRKO75564 520 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 MFN2O95140 757 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 ZNF682O95780 498 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 ALBP02768 609 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 NTRK1P04629 796 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 IFNW1P05000 195 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 GP1BAP07359 652 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 GIMD1P0DJR0 217 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 THRBP10828 461 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 ZNF23P17027 643 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 ENDOUP21128 410 aaKnown RBP6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 MAOBP27338 520 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 DCTP40126 519 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 KCNJ5P48544 419 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 ARL4DP49703 201 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms