RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 CCT3P49368 545 aaKnown RBP7.66□□□□□ -1.18
HPS4-205ENST00000429411 GINS1Q14691 196 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 ZDHHC20Q5W0Z9 365 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 C6orf120Q7Z4R8 191 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 NRARPQ7Z6K4 114 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 FAM129CQ86XR2 697 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 RAB43Q86YS6 212 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 OR52N2Q8NGI0 321 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 CXorf40AQ8TE69 158 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 GATAD2BQ8WXI9 593 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 RELTQ969Z4 430 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 RAD51AP1Q96B01 352 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 ARSGQ96EG1 525 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 CITED4Q96RK1 184 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 ZNF607Q96SK3 696 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 PHOX2BQ99453 314 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 KCNK6Q9Y257 313 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 HCFC2Q9Y5Z7 792 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 FAM186AA6NE01 2351 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 A0A1B0GVC2 190 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 A6NIN4 97 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 CPSF4LA6NMK7 179 aaKnown RBP7.66□□□□□ -1.18
HPS4-205ENST00000429411 QSOX1O00391 747 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 ARHGAP33O14559 1287 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 PPM1DO15297 605 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 LRRTM2O43300 516 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 PLOD3O60568 738 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 EIF2S1P05198 315 aaKnown RBP7.66□□□□□ -1.18
HPS4-205ENST00000429411 PTPN6P29350 595 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 CSTF2P33240 577 aaKnown RBP eCLIP7.66□□□□□ -1.18
HPS4-205ENST00000429411 PCGF2P35227 344 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 NCBP2P52298 156 aaKnown RBP eCLIP7.66□□□□□ -1.18
HPS4-205ENST00000429411 CXCR4P61073 352 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 KRR1Q13601 381 aaKnown RBP7.66□□□□□ -1.18
HPS4-205ENST00000429411 IL18Q14116 193 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 HEPACAMQ14CZ8 416 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 SYPL1Q16563 259 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 SMU1Q2TAY7 513 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 LRIT3Q3SXY7 679 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 OR2G6Q5TZ20 316 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 FRMPD2BQ6IN97 320 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 ZNF517Q6ZMY9 492 aaPredicted RBP7.66□□□□□ -1.18
HPS4-205ENST00000429411 ADGRD2Q7Z7M1 963 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 CCDC116Q8IYX3 515 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 SLC39A11Q8N1S5 342 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 SYNPOQ8N3V7 929 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 MFSD4AQ8N468 514 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 HORMAD2Q8N7B1 307 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 FAM46DQ8NEK8 389 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 APH1BQ8WW43 257 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 SUSD6Q92537 303 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 VWCEQ96DN2 955 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 NUS1Q96E22 293 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 LRR1Q96L50 414 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 NECTIN4Q96NY8 510 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 AIF1LQ9BQI0 150 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 TP63Q9H3D4 680 aaPredicted RBP7.66□□□□□ -1.18
HPS4-205ENST00000429411 IL21Q9HBE4 155 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 TM7SF3Q9NS93 570 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 CLCA3PQ9Y6N3 262 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 ENPP4Q9Y6X5 453 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 HSPE1-MOB4S4R3N1 261 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 REV3LO60673 3130 aa7.66□□□□□ -1.18
HPS4-205ENST00000429411 URB1O60287 2271 aaKnown RBP7.66□□□□□ -1.18
HPS4-205ENST00000429411 METTL15A6NJ78 407 aa7.65□□□□□ -1.18
HPS4-205ENST00000429411 TNFRSF21O75509 655 aa7.65□□□□□ -1.18
HPS4-205ENST00000429411 ZNF30P17039 623 aa7.65□□□□□ -1.18
HPS4-205ENST00000429411 TNFSF8P32971 234 aa7.65□□□□□ -1.18
HPS4-205ENST00000429411 CCR2P41597 374 aa7.65□□□□□ -1.18
HPS4-205ENST00000429411 PNLIPRP1P54315 467 aa7.65□□□□□ -1.18
HPS4-205ENST00000429411 CSNK2BP67870 215 aa7.65□□□□□ -1.18
HPS4-205ENST00000429411 ZNF630Q2M218 657 aaPredicted RBP7.65□□□□□ -1.18
HPS4-205ENST00000429411 ZNF805Q5CZA5 627 aa7.65□□□□□ -1.18
HPS4-205ENST00000429411 ZMAT1Q5H9K5 638 aa7.65□□□□□ -1.18
HPS4-205ENST00000429411 LIPIQ6XZB0 460 aa7.65□□□□□ -1.18
HPS4-205ENST00000429411 ZNF730Q6ZMV8 503 aa7.65□□□□□ -1.18
HPS4-205ENST00000429411 PARS2Q7L3T8 475 aaKnown RBP7.65□□□□□ -1.18
HPS4-205ENST00000429411 SLC46A3Q7Z3Q1 461 aa7.65□□□□□ -1.18
HPS4-205ENST00000429411 LAPTM4BQ86VI4 370 aa7.65□□□□□ -1.18
HPS4-205ENST00000429411 LAX1Q8IWV1 398 aa7.65□□□□□ -1.18
HPS4-205ENST00000429411 TCEAL8Q8IYN2 117 aa7.65□□□□□ -1.18
HPS4-205ENST00000429411 TRAM1L1Q8N609 369 aa7.65□□□□□ -1.18
HPS4-205ENST00000429411 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.65□□□□□ -1.182e-7■■■□□ 19.1
HPS4-205ENST00000429411 C7orf34Q96L11 122 aa7.65□□□□□ -1.18
HPS4-205ENST00000429411 EPYCQ99645 322 aa7.65□□□□□ -1.18
HPS4-205ENST00000429411 RACGAP1Q9H0H5 632 aa7.65□□□□□ -1.18
HPS4-205ENST00000429411 CXorf36Q9H7Y0 433 aa7.65□□□□□ -1.18
HPS4-205ENST00000429411 SMURF1Q9HCE7 757 aa7.65□□□□□ -1.18
HPS4-205ENST00000429411 DMRT3Q9NQL9 472 aa7.65□□□□□ -1.18
HPS4-205ENST00000429411 ENOPH1Q9UHY7 261 aa7.65□□□□□ -1.18
HPS4-205ENST00000429411 CLCA2Q9UQC9 943 aa7.65□□□□□ -1.18
HPS4-205ENST00000429411 SLC9A8Q9Y2E8 581 aa7.65□□□□□ -1.18
HPS4-205ENST00000429411 YARS2Q9Y2Z4 477 aaKnown RBP7.65□□□□□ -1.18
HPS4-205ENST00000429411 GPSM3Q9Y4H4 160 aa7.65□□□□□ -1.18
HPS4-205ENST00000429411 SOBPA7XYQ1 873 aa7.65□□□□□ -1.18
HPS4-205ENST00000429411 VSTM5A8MXK1 200 aa7.65□□□□□ -1.18
HPS4-205ENST00000429411 ISM1B1AKI9 464 aa7.65□□□□□ -1.18
HPS4-205ENST00000429411 GFYI3L273 518 aa7.65□□□□□ -1.18
HPS4-205ENST00000429411 PI15O43692 258 aa7.65□□□□□ -1.18
HPS4-205ENST00000429411 GPR37L1O60883 481 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms