RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 C16orf45Q96MC5 204 aaPredicted RBP15.72■□□□□ 0.11
TRIM39-209ENST00000428728 SERPINI1Q99574 410 aa15.72■□□□□ 0.11
TRIM39-209ENST00000428728 ZFP64Q9NPA5 681 aa15.72■□□□□ 0.11
TRIM39-209ENST00000428728 ALKBH4Q9NXW9 302 aa15.72■□□□□ 0.11
TRIM39-209ENST00000428728 PCTPQ9UKL6 214 aa15.72■□□□□ 0.11
TRIM39-209ENST00000428728 MED13LQ71F56 2210 aa15.72■□□□□ 0.11
TRIM39-209ENST00000428728 CCDC168Q8NDH2 2452 aa15.71■□□□□ 0.11
TRIM39-209ENST00000428728 OR6C76A6NM76 312 aa15.71■□□□□ 0.11
TRIM39-209ENST00000428728 PGRMC2O15173 223 aa15.71■□□□□ 0.11
TRIM39-209ENST00000428728 WDR1O75083 606 aa15.71■□□□□ 0.11
TRIM39-209ENST00000428728 SMIM24O75264 130 aa15.71■□□□□ 0.11
TRIM39-209ENST00000428728 SEMA3DO95025 777 aa15.71■□□□□ 0.11
TRIM39-209ENST00000428728 CT62P0C5K7 136 aa15.71■□□□□ 0.11
TRIM39-209ENST00000428728 GLI4P10075 376 aa15.71■□□□□ 0.11
TRIM39-209ENST00000428728 TRPC1P48995 793 aa15.71■□□□□ 0.11
TRIM39-209ENST00000428728 TRAF3Q13114 568 aa15.71■□□□□ 0.11
TRIM39-209ENST00000428728 NTRK2Q16620 822 aa15.71■□□□□ 0.11
TRIM39-209ENST00000428728 SGO1Q5FBB7 561 aa15.71■□□□□ 0.11
TRIM39-209ENST00000428728 C6orf163Q5TEZ5 329 aa15.71■□□□□ 0.11
TRIM39-209ENST00000428728 FRG2Q64ET8 278 aa15.71■□□□□ 0.11
TRIM39-209ENST00000428728 METTL2BQ6P1Q9 378 aaKnown RBP15.71■□□□□ 0.11
TRIM39-209ENST00000428728 TAOK1Q7L7X3 1001 aa15.71■□□□□ 0.11
TRIM39-209ENST00000428728 GALNT12Q8IXK2 581 aa15.71■□□□□ 0.11
TRIM39-209ENST00000428728 DND1Q8IYX4 353 aaKnown RBP15.71■□□□□ 0.11
TRIM39-209ENST00000428728 TAGAPQ8N103 731 aa15.71■□□□□ 0.11
TRIM39-209ENST00000428728 ZNF597Q96LX8 424 aa15.71■□□□□ 0.11
TRIM39-209ENST00000428728 FRG2BQ96QU4 278 aa15.71■□□□□ 0.11
TRIM39-209ENST00000428728 PAFAH2Q99487 392 aa15.71■□□□□ 0.11
TRIM39-209ENST00000428728 DOHHQ9BU89 302 aa15.71■□□□□ 0.11
TRIM39-209ENST00000428728 MRPL1Q9BYD6 325 aaKnown RBP15.71■□□□□ 0.11
TRIM39-209ENST00000428728 CXorf21Q9HAI6 301 aa15.71■□□□□ 0.11
TRIM39-209ENST00000428728 PROK2Q9HC23 129 aa15.71■□□□□ 0.11
TRIM39-209ENST00000428728 ZBTB26Q9HCK0 441 aa15.71■□□□□ 0.11
TRIM39-209ENST00000428728 CNIH4Q9P003 139 aa15.71■□□□□ 0.11
TRIM39-209ENST00000428728 CNOT11Q9UKZ1 510 aaKnown RBP15.71■□□□□ 0.11
TRIM39-209ENST00000428728 IKBKGQ9Y6K9 419 aa15.71■□□□□ 0.11
TRIM39-209ENST00000428728 A0A0G2JNJ9 132 aa15.7■□□□□ 0.1
TRIM39-209ENST00000428728 C2orf92A0A1B0GVN3 265 aa15.7■□□□□ 0.1
TRIM39-209ENST00000428728 FOXO6A8MYZ6 492 aa15.7■□□□□ 0.1
TRIM39-209ENST00000428728 POC1B-GALNT4F8VUJ3 575 aa15.7■□□□□ 0.1
TRIM39-209ENST00000428728 STX16-NPEPL1H3BU86 382 aa15.7■□□□□ 0.1
TRIM39-209ENST00000428728 STX16O14662 325 aa15.7■□□□□ 0.1
TRIM39-209ENST00000428728 HCN1O60741 890 aa15.7■□□□□ 0.1
TRIM39-209ENST00000428728 KLK1P06870 262 aa15.7■□□□□ 0.1
TRIM39-209ENST00000428728 RBP1P09455 135 aa15.7■□□□□ 0.1
TRIM39-209ENST00000428728 SLC35E2P0CK97 266 aa15.7■□□□□ 0.1
TRIM39-209ENST00000428728 CAPN3P20807 821 aa15.7■□□□□ 0.1
TRIM39-209ENST00000428728 GDF1P27539 372 aa15.7■□□□□ 0.1
TRIM39-209ENST00000428728 MAGEA12P43365 314 aa15.7■□□□□ 0.1
TRIM39-209ENST00000428728 ZFP36L2P47974 494 aaKnown RBP15.7■□□□□ 0.1
TRIM39-209ENST00000428728 TBL3Q12788 808 aaKnown RBP15.7■□□□□ 0.1
TRIM39-209ENST00000428728 IFT88Q13099 833 aa15.7■□□□□ 0.1
TRIM39-209ENST00000428728 TSNAXIP1Q2TAA8 658 aa15.7■□□□□ 0.1
TRIM39-209ENST00000428728 FAM219BQ5XKK7 198 aa15.7■□□□□ 0.1
TRIM39-209ENST00000428728 HLA-DQA1Q5Y7H0 255 aa15.7■□□□□ 0.1
TRIM39-209ENST00000428728 DMRTC2Q8IXT2 367 aaPredicted RBP15.7■□□□□ 0.1
TRIM39-209ENST00000428728 LIX1Q8N485 282 aa15.7■□□□□ 0.1
TRIM39-209ENST00000428728 UHMK1Q8TAS1 419 aaKnown RBP15.7■□□□□ 0.1
TRIM39-209ENST00000428728 DIO2Q92813 273 aa15.7■□□□□ 0.1
TRIM39-209ENST00000428728 ISL2Q96A47 359 aa15.7■□□□□ 0.1
TRIM39-209ENST00000428728 PSD3Q9NYI0 1048 aa15.7■□□□□ 0.1
TRIM39-209ENST00000428728 B4GALT7Q9UBV7 327 aa15.7■□□□□ 0.1
TRIM39-209ENST00000428728 Q9UFV3 132 aa15.7■□□□□ 0.1
TRIM39-209ENST00000428728 TRIM49D1C9J1S8 452 aa15.69■□□□□ 0.1
TRIM39-209ENST00000428728 NT5EP21589 574 aa15.69■□□□□ 0.1
TRIM39-209ENST00000428728 GALNSP34059 522 aa15.69■□□□□ 0.1
TRIM39-209ENST00000428728 ADH7P40394 386 aa15.69■□□□□ 0.1
TRIM39-209ENST00000428728 SERPINB9P50453 376 aa15.69■□□□□ 0.1
TRIM39-209ENST00000428728 FBXW4P57775 412 aa15.69■□□□□ 0.1
TRIM39-209ENST00000428728 MYBPHQ13203 477 aa15.69■□□□□ 0.1
TRIM39-209ENST00000428728 RPS6KA2Q15349 733 aa15.69■□□□□ 0.1
TRIM39-209ENST00000428728 BICRALQ6AI39 1079 aa15.69■□□□□ 0.1
TRIM39-209ENST00000428728 WDR53Q7Z5U6 358 aaPredicted RBP15.69■□□□□ 0.1
TRIM39-209ENST00000428728 TMEM200AQ86VY9 491 aa15.69■□□□□ 0.1
TRIM39-209ENST00000428728 PRR22Q8IZ63 422 aa15.69■□□□□ 0.1
TRIM39-209ENST00000428728 LRRC25Q8N386 305 aaPredicted RBP15.69■□□□□ 0.1
TRIM39-209ENST00000428728 ZNF441Q8N8Z8 693 aa15.69■□□□□ 0.1
TRIM39-209ENST00000428728 NOA1Q8NC60 698 aaKnown RBP15.69■□□□□ 0.1
TRIM39-209ENST00000428728 OR4F6Q8NGB9 312 aa15.69■□□□□ 0.1
TRIM39-209ENST00000428728 OR4K14Q8NGD5 310 aa15.69■□□□□ 0.1
TRIM39-209ENST00000428728 IFT81Q8WYA0 676 aa15.69■□□□□ 0.1
TRIM39-209ENST00000428728 FMO2Q99518 471 aa15.69■□□□□ 0.1
TRIM39-209ENST00000428728 ZNF559Q9BR84 538 aa15.69■□□□□ 0.1
TRIM39-209ENST00000428728 NTMT1Q9BV86 223 aa15.69■□□□□ 0.1
TRIM39-209ENST00000428728 ELOVL6Q9H5J4 265 aa15.69■□□□□ 0.1
TRIM39-209ENST00000428728 FARSBQ9NSD9 589 aaKnown RBP15.69■□□□□ 0.1
TRIM39-209ENST00000428728 DMGDHQ9UI17 866 aaKnown RBP15.69■□□□□ 0.1
TRIM39-209ENST00000428728 TMCO1Q9UM00 188 aa15.69■□□□□ 0.1
TRIM39-209ENST00000428728 SLC12A4Q9UP95 1085 aa15.69■□□□□ 0.1
TRIM39-209ENST00000428728 DOCK7Q96N67 2140 aa15.68■□□□□ 0.1
TRIM39-209ENST00000428728 C15orf38-AP3S2A0A0A6YYH1 394 aa15.68■□□□□ 0.1
TRIM39-209ENST00000428728 A0A1B0GTL3 188 aa15.68■□□□□ 0.1
TRIM39-209ENST00000428728 KRT38O76015 456 aa15.68■□□□□ 0.1
TRIM39-209ENST00000428728 RPS17P08708 135 aaKnown RBP15.68■□□□□ 0.1
TRIM39-209ENST00000428728 HOXD4P09016 255 aaPredicted RBP15.68■□□□□ 0.1
TRIM39-209ENST00000428728 CPMP14384 443 aa15.68■□□□□ 0.1
TRIM39-209ENST00000428728 TSPAN8P19075 237 aa15.68■□□□□ 0.1
TRIM39-209ENST00000428728 MAPK12P53778 367 aa15.68■□□□□ 0.1
TRIM39-209ENST00000428728 NNATQ16517 81 aa15.68■□□□□ 0.1
TRIM39-209ENST00000428728 WHAMMP3Q1A5X7 153 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms