RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 ZFAND4Q86XD8 727 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 BORCS5Q969J3 196 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 CHFRQ96EP1 664 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 CDCA3Q99618 268 aaPredicted RBP9.27□□□□□ -0.93
SNX13-203ENST00000428135 LPAR4Q99677 370 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 SP140LQ9H930 580 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 GKN3PP0CG01 181 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 LAMP1P11279 417 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 AP3S2P59780 193 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 DCDC1P59894 354 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 MAT1AQ00266 395 aaKnown RBP9.27□□□□□ -0.93
SNX13-203ENST00000428135 SLC36A3Q495N2 470 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 GTDC1Q4AE62 458 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 USP43Q70EL4 1123 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.27□□□□□ -0.93
SNX13-203ENST00000428135 PITX2Q99697 317 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 CTRCQ99895 268 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 C1orf21Q9H246 121 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 LIN28AQ9H9Z2 209 aaKnown RBP9.27□□□□□ -0.93
SNX13-203ENST00000428135 ZNF69Q9UC07 566 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 KCNS2Q9ULS6 477 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 GPR52Q9Y2T5 361 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 TJP1Q07157 1748 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 PRSS38A1L453 326 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 C17orf105B2RV13 164 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 PRKCAP17252 672 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 FCHO2Q0JRZ9 810 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 SCAPQ12770 1279 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 TUBB3Q13509 450 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 OCLNQ16625 522 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 C9orf135Q5VTT2 229 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 RTN4RL1Q86UN2 441 aaPredicted RBP9.27□□□□□ -0.93
SNX13-203ENST00000428135 ZNF775Q96BV0 537 aaPredicted RBP9.27□□□□□ -0.93
SNX13-203ENST00000428135 TRIM36Q9NQ86 728 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 HTR3EA5X5Y0 456 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 MC3RP41968 323 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 ZFP69Q49AA0 526 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 LETMD1Q6P1Q0 360 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 SLC36A4Q6YBV0 504 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 TREML1Q86YW5 311 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 FAM86B1Q8N7N1 296 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 OSTF1Q92882 214 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 GAL3ST3Q96A11 431 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 POPDC3Q9HBV1 291 aa9.27□□□□□ -0.93
SNX13-203ENST00000428135 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.26□□□□□ -0.93
SNX13-203ENST00000428135 GGT2P36268 569 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 FOLR3P41439 243 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 MAP2K4P45985 399 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 ZNF84P51523 738 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 FOXA1P55317 472 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 LHX8Q68G74 356 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 PNCKQ6P2M8 343 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 TRMT10AQ8TBZ6 339 aaKnown RBP9.26□□□□□ -0.93
SNX13-203ENST00000428135 NEIL2Q969S2 332 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 MND1Q9BWT6 205 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 SLC22A2O15244 555 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 MTRF1O75570 445 aaKnown RBP9.26□□□□□ -0.93
SNX13-203ENST00000428135 EGFP01133 1207 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 UQCRC1P31930 480 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 HOXC5Q00444 222 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 CTBSQ01459 385 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 SQSTM1Q13501 440 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 MAD2L1BPQ15013 274 aaPredicted RBP9.26□□□□□ -0.93
SNX13-203ENST00000428135 ENPP6Q6UWR7 440 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 KCTD9Q7L273 389 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 SSX6Q7RTT6 188 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 ZNF548Q8NEK5 533 aaPredicted RBP9.26□□□□□ -0.93
SNX13-203ENST00000428135 OR52E2Q8NGJ4 325 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 TMEM168Q9H0V1 697 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 C14orf105Q9NVL8 296 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 SCAMP2O15127 329 aaKnown RBP9.26□□□□□ -0.93
SNX13-203ENST00000428135 FPR1P21462 350 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 CD38P28907 300 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 TAS2R38P59533 333 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 GBX1Q14549 363 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 EXOSC7Q15024 291 aaKnown RBP9.26□□□□□ -0.93
SNX13-203ENST00000428135 OR4K13Q8NH42 304 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 NPRL2Q8WTW4 380 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 GATAD2BQ8WXI9 593 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 OR5B2Q96R09 309 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 UBE2ZQ9H832 354 aaPredicted RBP9.26□□□□□ -0.93
SNX13-203ENST00000428135 FBRSQ9HAH7 460 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 ADAMTS6Q9UKP5 1117 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 VSTM2BA6NLU5 285 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 EFCAB7A8K855 629 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 LATS1O95835 1130 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 CFL1P23528 166 aaKnown RBP9.26□□□□□ -0.93
SNX13-203ENST00000428135 ITGB7P26010 798 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 POU3F4P49335 361 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 DLX2Q07687 328 aaPredicted RBP9.26□□□□□ -0.93
SNX13-203ENST00000428135 RAB39AQ14964 217 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 TMEM135Q86UB9 458 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 IQCF1Q8N6M8 205 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 CASTOR1Q8WTX7 329 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 CRYGNQ8WXF5 182 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 HAVCR1Q96D42 359 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 MRPL38Q96DV4 380 aaKnown RBP9.26□□□□□ -0.93
SNX13-203ENST00000428135 ZNF701Q9NV72 531 aaPredicted RBP9.26□□□□□ -0.93
SNX13-203ENST00000428135 GSKIPQ9P0R6 139 aa9.26□□□□□ -0.93
SNX13-203ENST00000428135 EIF3KQ9UBQ5 218 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms