RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 CALML5Q9NZT1 146 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 COMMD3Q9UBI1 195 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 PLEKHB1Q9UF11 243 aaPredicted RBP5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 FEM1BQ9UK73 627 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 FZD10Q9ULW2 581 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 CARHSP1Q9Y2V2 147 aaKnown RBP5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 HES2Q9Y543 173 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 TRPV2Q9Y5S1 764 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 USP3Q9Y6I4 520 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 ZFC3H1O60293 1989 aaKnown RBP5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 DOCK1Q14185 1865 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 ROBO1Q9Y6N7 1651 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 COL5A2P05997 1499 aaPredicted RBP5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 TRAV19A0A0A6YYK7 116 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 A0A0U1RQS6 177 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 KANTRA0A1W2PQU2 76 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 PLSCR5A0PG75 271 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 LCHNA4D1U4 455 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 RRN3P2A6NIE6 340 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 AGAP14A8MT82 685 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 SMLR1H3BR10 107 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 DDX39AO00148 427 aaKnown RBP5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 CLIC1O00299 241 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 UBFD1O14562 309 aaKnown RBP5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 CTDSPLO15194 276 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 FGF10O15520 208 aaPredicted RBP5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 SMAD6O43541 496 aaKnown RBP5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 CACNG3O60359 315 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 HPGDSO60760 199 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 UBL3O95164 117 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 STBD1O95210 358 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 GLP2RO95838 553 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 CBX7O95931 251 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 MT-CO1P00395 513 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 HPP00738 406 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 GNRH1P01148 92 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 IL2RAP01589 272 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 MT-ND4LP03901 98 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 SEMG1P04279 462 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 IL5P05113 134 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 SERPINA5P05154 406 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 CD2P06729 351 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 CHRM5P08912 532 aaPredicted RBP5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 CD63P08962 238 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 GKN3PP0CG01 181 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 SELLP14151 372 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 GABRA1P14867 456 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 IFNGR1P15260 489 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 GOT1P17174 413 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 CNR1P21554 472 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 FDXRP22570 491 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 LAP3P28838 519 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 KDELR2P33947 212 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 TRHRP34981 398 aaPredicted RBP5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 CSNK1EP49674 416 aaKnown RBP5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 RGS4P49798 205 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 PLK1P53350 603 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 CXADRP78310 365 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 SP2Q02086 613 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 MLLT1Q03111 559 aaPredicted RBP5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 SRSF11Q05519 484 aaKnown RBP5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 DSC1Q08554 894 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 RBBP4Q09028 425 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 C2orf80Q0P641 193 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 RAB40BQ12829 278 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 PPIGQ13427 754 aaKnown RBP eCLIP5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 TPBGQ13641 420 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 ZNF345Q14585 488 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 SSX1Q16384 188 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 GSG1Q2KHT4 349 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 EXOC3L2Q2M3D2 409 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 GOLGA7BQ2TAP0 167 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 SV2CQ496J9 727 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 IFI44LQ53G44 452 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 MFSD14BQ5SR56 506 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 SLC25A30Q5SVS4 291 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 CERCAMQ5T4B2 595 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 HBMQ6B0K9 141 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 ADNP2Q6IQ32 1131 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 APOBEC3HQ6NTF7 200 aaKnown RBP5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 TAPT1Q6NXT6 567 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 LPCAT3Q6P1A2 487 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 CD200R1LQ6Q8B3 271 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 HHIPL2Q6UWX4 724 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 UNC5DQ6UXZ4 953 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 IL34Q6ZMJ4 242 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 CYHR1Q6ZMK1 362 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 GAREM2Q75VX8 874 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 ABHD13Q7L211 337 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 CXXC5Q7LFL8 322 aaKnown RBP5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 MRPL52Q86TS9 123 aaKnown RBP5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 METTL23Q86XA0 190 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 CILP2Q8IUL8 1156 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 CCDC71Q8IV32 467 aaPredicted RBP5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 HS3ST5Q8IZT8 346 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 NAGSQ8N159 534 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 THEM5Q8N1Q8 247 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 OR6C4Q8NGE1 309 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 OR5B17Q8NGF7 314 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 OR1J4Q8NGS1 313 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms