RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 UCN3Q969E3 161 aa8.7□□□□□ -1.02
NUP50-205ENST00000419387 SPACA9Q96E40 222 aaPredicted RBP8.7□□□□□ -1.02
NUP50-205ENST00000419387 SMC6Q96SB8 1091 aa8.7□□□□□ -1.02
NUP50-205ENST00000419387 PAFAH2Q99487 392 aa8.7□□□□□ -1.02
NUP50-205ENST00000419387 CNPPD1Q9BV87 410 aa8.7□□□□□ -1.02
NUP50-205ENST00000419387 LDAHQ9H6V9 325 aa8.7□□□□□ -1.02
NUP50-205ENST00000419387 SEMA4BQ9NPR2 832 aaPredicted RBP8.7□□□□□ -1.02
NUP50-205ENST00000419387 PNPLA3Q9NST1 481 aa8.7□□□□□ -1.02
NUP50-205ENST00000419387 AHSPQ9NZD4 102 aa8.7□□□□□ -1.02
NUP50-205ENST00000419387 PCTPQ9UKL6 214 aa8.7□□□□□ -1.02
NUP50-205ENST00000419387 RAB21Q9UL25 225 aa8.7□□□□□ -1.02
NUP50-205ENST00000419387 RNF6Q9Y252 685 aa8.7□□□□□ -1.02
NUP50-205ENST00000419387 LIPGQ9Y5X9 500 aa8.7□□□□□ -1.02
NUP50-205ENST00000419387 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.7□□□□□ -1.02
NUP50-205ENST00000419387 POC1B-GALNT4F8VUJ3 575 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 AQP7O14520 342 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 RIPK2O43353 540 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 HCN1O60741 890 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 CLPSP04118 112 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 KLK1P06870 262 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 CELA3AP09093 270 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 FBXO45P0C2W1 286 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 CNTFP26441 200 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 PIK3R1P27986 724 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 MAN2A2P49641 1150 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 NUP107P57740 925 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 IFT88Q13099 833 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 TRAF3Q13114 568 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 SLC29A2Q14542 456 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 EBPQ15125 230 aaKnown RBP8.69□□□□□ -1.02
NUP50-205ENST00000419387 FRG2Q64ET8 278 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 OR52E8Q6IFG1 317 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 ZNF585AQ6P3V2 769 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 MEX3BQ6ZN04 569 aaKnown RBP8.69□□□□□ -1.02
NUP50-205ENST00000419387 PAGE2Q7Z2X7 111 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 MILR1Q7Z6M3 343 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 TAGAPQ8N103 731 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 FBXW8Q8N3Y1 598 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 FAM13CQ8NE31 585 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 OR4F6Q8NGB9 312 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 OR4K14Q8NGD5 310 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 OR5M3Q8NGP4 307 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 AENQ8WTP8 325 aaKnown RBP8.69□□□□□ -1.02
NUP50-205ENST00000419387 DCAKDQ8WVC6 231 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 TP53INP1Q96A56 240 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 ZNF775Q96BV0 537 aaPredicted RBP8.69□□□□□ -1.02
NUP50-205ENST00000419387 C14orf79Q96F83 325 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 NSUN5Q96P11 429 aaKnown RBP8.69□□□□□ -1.02
NUP50-205ENST00000419387 FRG2BQ96QU4 278 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 GAL3ST4Q96RP7 486 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 TREX2Q9BQ50 279 aaPredicted RBP8.69□□□□□ -1.02
NUP50-205ENST00000419387 MRPL57Q9BQC6 102 aaKnown RBP8.69□□□□□ -1.02
NUP50-205ENST00000419387 PARD6BQ9BYG5 372 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 UCK2Q9BZX2 261 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 WWTR1Q9GZV5 400 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 CXorf21Q9HAI6 301 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 PROK2Q9HC23 129 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 ZBTB26Q9HCK0 441 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 ZFP64Q9NPA5 681 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 KCNJ16Q9NPI9 418 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 CNIH4Q9P003 139 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 XPR1Q9UBH6 696 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 ZNF180Q9UJW8 692 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 ADAM29Q9UKF5 820 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 ACAD8Q9UKU7 415 aa8.69□□□□□ -1.02
NUP50-205ENST00000419387 BOKQ9UMX3 212 aaPredicted RBP8.69□□□□□ -1.02
NUP50-205ENST00000419387 CHCHD2Q9Y6H1 151 aaPredicted RBP8.69□□□□□ -1.02
NUP50-205ENST00000419387 EML6Q6ZMW3 1958 aa8.68□□□□□ -1.02
NUP50-205ENST00000419387 CACNA1CQ13936 2221 aa8.68□□□□□ -1.02
NUP50-205ENST00000419387 ZNF407Q9C0G0 2248 aa8.68□□□□□ -1.02
NUP50-205ENST00000419387 A0A087WUV0 522 aaPredicted RBP8.68□□□□□ -1.02
NUP50-205ENST00000419387 TRGV5A0A0B4J1U4 118 aa8.68□□□□□ -1.02
NUP50-205ENST00000419387 C2orf92A0A1B0GVN3 265 aa8.68□□□□□ -1.02
NUP50-205ENST00000419387 A0A1W2PS29 197 aa8.68□□□□□ -1.02
NUP50-205ENST00000419387 NKX2-6A6NCS4 301 aa8.68□□□□□ -1.02
NUP50-205ENST00000419387 FIGNL2A6NMB9 653 aa8.68□□□□□ -1.02
NUP50-205ENST00000419387 FAM90A27PA6NNH2 459 aa8.68□□□□□ -1.02
NUP50-205ENST00000419387 CAPN14A8MX76 684 aa8.68□□□□□ -1.02
NUP50-205ENST00000419387 TRIM49D1C9J1S8 452 aa8.68□□□□□ -1.02
NUP50-205ENST00000419387 TOXO94900 526 aa8.68□□□□□ -1.02
NUP50-205ENST00000419387 RPS17P08708 135 aaKnown RBP8.68□□□□□ -1.02
NUP50-205ENST00000419387 SNRPAP09012 282 aaKnown RBP8.68□□□□□ -1.02
NUP50-205ENST00000419387 RFPL3SP0C7P2 107 aa8.68□□□□□ -1.02
NUP50-205ENST00000419387 CAPN3P20807 821 aa8.68□□□□□ -1.02
NUP50-205ENST00000419387 ACVR2AP27037 513 aa8.68□□□□□ -1.02
NUP50-205ENST00000419387 SSTR4P31391 388 aa8.68□□□□□ -1.02
NUP50-205ENST00000419387 XKP51811 444 aa8.68□□□□□ -1.02
NUP50-205ENST00000419387 KCNJ2P63252 427 aa8.68□□□□□ -1.02
NUP50-205ENST00000419387 TFF3Q07654 80 aa8.68□□□□□ -1.02
NUP50-205ENST00000419387 FUT7Q11130 342 aa8.68□□□□□ -1.02
NUP50-205ENST00000419387 NTRK2Q16620 822 aa8.68□□□□□ -1.02
NUP50-205ENST00000419387 GGTA1PQ4G0N0 100 aa8.68□□□□□ -1.02
NUP50-205ENST00000419387 SGO1Q5FBB7 561 aa8.68□□□□□ -1.02
NUP50-205ENST00000419387 CCNYL2Q5T2Q4 361 aa8.68□□□□□ -1.02
NUP50-205ENST00000419387 WLSQ5T9L3 541 aa8.68□□□□□ -1.02
NUP50-205ENST00000419387 PRAMEF20Q5VT98 475 aa8.68□□□□□ -1.02
NUP50-205ENST00000419387 B3GNT6Q6ZMB0 384 aa8.68□□□□□ -1.02
NUP50-205ENST00000419387 RPS27LQ71UM5 84 aaKnown RBP8.68□□□□□ -1.02
NUP50-205ENST00000419387 TRMT10CQ7L0Y3 403 aaKnown RBP8.68□□□□□ -1.02
NUP50-205ENST00000419387 CCDC71Q8IV32 467 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms