RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 TMEM104Q8NE00 496 aa5.44□□□□□ -1.54
CBX1P3-201ENST00000413296 OR8J2Q8NGG1 315 aa5.44□□□□□ -1.54
CBX1P3-201ENST00000413296 OR52N4Q8NGI2 321 aa5.44□□□□□ -1.54
CBX1P3-201ENST00000413296 SSMEM1Q8WWF3 244 aa5.44□□□□□ -1.54
CBX1P3-201ENST00000413296 NRGNQ92686 78 aa5.44□□□□□ -1.54
CBX1P3-201ENST00000413296 LHX4Q969G2 390 aa5.44□□□□□ -1.54
CBX1P3-201ENST00000413296 PLEKHA8Q96JA3 519 aa5.44□□□□□ -1.54
CBX1P3-201ENST00000413296 TGM7Q96PF1 710 aa5.44□□□□□ -1.54
CBX1P3-201ENST00000413296 MMS19Q96T76 1030 aa5.44□□□□□ -1.54
CBX1P3-201ENST00000413296 LMF2Q9BU23 707 aaKnown RBP5.44□□□□□ -1.54
CBX1P3-201ENST00000413296 LRRC2Q9BYS8 371 aa5.44□□□□□ -1.54
CBX1P3-201ENST00000413296 PRRG4Q9BZD6 226 aa5.44□□□□□ -1.54
CBX1P3-201ENST00000413296 SEMA4CQ9C0C4 833 aa5.44□□□□□ -1.54
CBX1P3-201ENST00000413296 OPN3Q9H1Y3 402 aaPredicted RBP5.44□□□□□ -1.54
CBX1P3-201ENST00000413296 GANQ9H2C0 597 aa5.44□□□□□ -1.54
CBX1P3-201ENST00000413296 SLA2Q9H6Q3 261 aa5.44□□□□□ -1.54
CBX1P3-201ENST00000413296 MARCH7Q9H992 704 aa5.44□□□□□ -1.54
CBX1P3-201ENST00000413296 CD320Q9NPF0 282 aa5.44□□□□□ -1.54
CBX1P3-201ENST00000413296 GSN-AS1Q9NRJ2 163 aa5.44□□□□□ -1.54
CBX1P3-201ENST00000413296 MED17Q9NVC6 651 aa5.44□□□□□ -1.54
CBX1P3-201ENST00000413296 MS4A12Q9NXJ0 267 aa5.44□□□□□ -1.54
CBX1P3-201ENST00000413296 IL37Q9NZH6 218 aa5.44□□□□□ -1.54
CBX1P3-201ENST00000413296 SLC9A2Q9UBY0 812 aa5.44□□□□□ -1.54
CBX1P3-201ENST00000413296 ZNF346Q9UL40 294 aaKnown RBP5.44□□□□□ -1.54
CBX1P3-201ENST00000413296 ACSL5Q9ULC5 683 aa5.44□□□□□ -1.54
CBX1P3-201ENST00000413296 EXOGQ9Y2C4 368 aaKnown RBP5.44□□□□□ -1.54
CBX1P3-201ENST00000413296 TMED7Q9Y3B3 224 aa5.44□□□□□ -1.54
CBX1P3-201ENST00000413296 NFE2L3Q9Y4A8 694 aa5.44□□□□□ -1.54
CBX1P3-201ENST00000413296 CSDC2Q9Y534 153 aaKnown RBP5.44□□□□□ -1.54
CBX1P3-201ENST00000413296 WNT6Q9Y6F9 365 aa5.44□□□□□ -1.54
CBX1P3-201ENST00000413296 STON1Q9Y6Q2 735 aa5.44□□□□□ -1.54
CBX1P3-201ENST00000413296 SALL1Q9NSC2 1324 aa5.44□□□□□ -1.54
CBX1P3-201ENST00000413296 ADGRB3O60242 1522 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 NUP155O75694 1391 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 METP08581 1390 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 ATRNO75882 1429 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 PTPRUQ92729 1446 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 CXorf65A6NEN9 183 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 FBLL1A6NHQ2 334 aaKnown RBP5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 A6NNC1 897 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 E9PMD0 336 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 NPIPA3F8WFD2 350 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 SGK494L7N484 410 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 P2RY10O00398 339 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 FPGTO14772 594 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 RNMTO43148 476 aaKnown RBP5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 MSI1O43347 362 aaKnown RBP5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 RNF8O76064 485 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 RGS11O94810 467 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 FGF5P12034 268 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 PSMB6P28072 239 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 HOXA9P31269 272 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 CD96P40200 585 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 LIMK2P53671 638 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 CLDN15P56746 228 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 PAX5Q02548 391 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 EEF1A2Q05639 463 aaKnown RBP5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 TROAPQ12815 778 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 MAD2L1Q13257 205 aaPredicted RBP5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 PMS2P3Q13401 168 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 CDH18Q13634 790 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 EXOSC2Q13868 293 aaKnown RBP5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 NFYCQ13952 458 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 TMEM132DQ14C87 1099 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 HEPACAMQ14CZ8 416 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 NONOQ15233 471 aaKnown RBP eCLIP5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 LSM12Q3MHD2 195 aaKnown RBP5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 TMEM31Q5JXX7 168 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 LGSNQ5TDP6 509 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 LIPNQ5VXI9 398 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 TWF2Q6IBS0 349 aaKnown RBP5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 METTL2BQ6P1Q9 378 aaKnown RBP5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 DOK6Q6PKX4 331 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 TMIGD1Q6UXZ0 262 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 LINC00114Q6XXX2 140 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 NLRP9Q7RTR0 991 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 DEFB132Q7Z7B7 95 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 B3GNT8Q7Z7M8 397 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 EMC1Q8N766 993 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 B3GALNT2Q8NCR0 500 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 OR10H4Q8NGA5 316 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 OR51L1Q8NGJ5 315 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 FANK1Q8TC84 345 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 PHOSPHO2Q8TCD6 241 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 CAPSLQ8WWF8 208 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 NEU4Q8WWR8 484 aaPredicted RBP5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 ING5Q8WYH8 240 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 MAP4K1Q92918 833 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 CCDC124Q96CT7 223 aaKnown RBP5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 MRPL53Q96EL3 112 aaKnown RBP5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 ZNF274Q96GC6 653 aaPredicted RBP5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 KAZALD1Q96I82 304 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 IGSF21Q96ID5 467 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 METTL2AQ96IZ6 378 aaKnown RBP5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 ZNF514Q96K75 400 aaPredicted RBP5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 SGK494Q96LW2 274 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 CMKLR1Q99788 373 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 PRMT1Q99873 361 aaKnown RBP5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 TUBGCP2Q9BSJ2 902 aa5.43□□□□□ -1.54
CBX1P3-201ENST00000413296 TSSK1BQ9BXA7 367 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms