RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 TSPAN33Q86UF1 283 aa8.05□□□□□ -1.12
SCN9A-203ENST00000409672 PROS1P07225 676 aa8.05□□□□□ -1.12
SCN9A-203ENST00000409672 TNFRSF1BP20333 461 aa8.05□□□□□ -1.12
SCN9A-203ENST00000409672 ZNF136P52737 540 aa8.05□□□□□ -1.12
SCN9A-203ENST00000409672 C18orf21Q32NC0 220 aaPredicted RBP8.05□□□□□ -1.12
SCN9A-203ENST00000409672 DUS1LQ6P1R4 473 aaKnown RBP8.05□□□□□ -1.12
SCN9A-203ENST00000409672 HOXB13Q92826 284 aaPredicted RBP8.05□□□□□ -1.12
SCN9A-203ENST00000409672 HES7Q9BYE0 225 aa8.05□□□□□ -1.12
SCN9A-203ENST00000409672 LIN28AQ9H9Z2 209 aaKnown RBP8.05□□□□□ -1.12
SCN9A-203ENST00000409672 CNTN6Q9UQ52 1028 aa8.05□□□□□ -1.12
SCN9A-203ENST00000409672 CHRNB2P17787 502 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 SLC6A6P31641 620 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 EMC10Q5UCC4 262 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 GRAMD2AQ8IUY3 354 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 CIDECQ96AQ7 238 aaPredicted RBP8.04□□□□□ -1.12
SCN9A-203ENST00000409672 AURKBQ96GD4 344 aaPredicted RBP8.04□□□□□ -1.12
SCN9A-203ENST00000409672 PRODH2Q9UF12 536 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 CLDN25C9JDP6 229 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 PEX2P28328 305 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 TAP2Q03519 686 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 NTRK2Q16620 822 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 UPP1Q16831 310 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 TBRG1Q3YBR2 411 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 UNQ6126/PRO20091Q6UXV3 157 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 SPAG16Q8N0X2 631 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 HS6ST2Q96MM7 605 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 CD244Q9BZW8 370 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 CALHM2Q9HA72 323 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 AASSQ9UDR5 926 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 A0A1B0GVC2 190 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 GPR37L1O60883 481 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 PRKCIP41743 596 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 AGFG1P52594 562 aaKnown RBP8.04□□□□□ -1.12
SCN9A-203ENST00000409672 HSD11B2P80365 405 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 UBE2Q1Q7Z7E8 422 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 GLYATL1Q969I3 302 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 GATA5Q9BWX5 397 aaPredicted RBP8.04□□□□□ -1.12
SCN9A-203ENST00000409672 SERTAD4Q9NUC0 356 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 MS4A12Q9NXJ0 267 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 MKLN1Q9UL63 735 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 MGAT4BQ9UQ53 548 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 UBE2J1Q9Y385 318 aaPredicted RBP8.04□□□□□ -1.12
SCN9A-203ENST00000409672 EI24O14681 340 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 TGDSO95455 350 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 BMPR1AP36894 532 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 XCR1P46094 333 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 CATSPEREQ5SY80 951 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 FIGLAQ6QHK4 219 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 OR9I1Q8NGQ6 314 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 OSTF1Q92882 214 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 TWNKQ96RR1 684 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 FUZQ9BT04 418 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 MROQ9BYG7 248 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 IL3P08700 152 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 ZNF30P17039 623 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 GNB1P62873 340 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 RPS26P11Q5JNZ5 115 aaPredicted RBP8.04□□□□□ -1.12
SCN9A-203ENST00000409672 RNF175Q8N4F7 328 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 OR51T1Q8NGJ9 327 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 GNPDA2Q8TDQ7 276 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 PEX13Q92968 403 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 COG8Q96MW5 612 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 RETREG1Q9H6L5 497 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 MAGED1Q9Y5V3 778 aaPredicted RBP8.04□□□□□ -1.12
SCN9A-203ENST00000409672 TIMM8AO60220 97 aaPredicted RBP8.04□□□□□ -1.12
SCN9A-203ENST00000409672 ZNF780AO75290 641 aaPredicted RBP8.04□□□□□ -1.12
SCN9A-203ENST00000409672 APBB3O95704 486 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 IFNA2P01563 188 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 IGFBP1P08833 259 aaPredicted RBP8.04□□□□□ -1.12
SCN9A-203ENST00000409672 CSNK1EP49674 416 aaKnown RBP8.04□□□□□ -1.12
SCN9A-203ENST00000409672 NR1H2P55055 460 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 GRIN2CQ14957 1233 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 NANOS1Q8WY41 292 aaKnown RBP8.04□□□□□ -1.12
SCN9A-203ENST00000409672 H0Y8G0 127 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 LSM1O15116 133 aaKnown RBP8.04□□□□□ -1.12
SCN9A-203ENST00000409672 PRICKLE3O43900 615 aaPredicted RBP8.04□□□□□ -1.12
SCN9A-203ENST00000409672 ENTPD6O75354 484 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 TRMUO75648 421 aaKnown RBP8.04□□□□□ -1.12
SCN9A-203ENST00000409672 IL1AP01583 271 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 MAP4K2Q12851 820 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 HERC3Q15034 1050 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 GPR33Q49SQ1 333 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 CHST14Q8NCH0 376 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 OR56A1Q8NGH5 318 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 TM9SF4Q92544 642 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 LRIT1Q9P2V4 623 aa8.04□□□□□ -1.12
SCN9A-203ENST00000409672 RPL36Q9Y3U8 105 aaKnown RBP8.04□□□□□ -1.12
SCN9A-203ENST00000409672 H7C417 338 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 AHSGP02765 367 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 BMP6P22004 513 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 NPTX1Q15818 432 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 MEX3BQ6ZN04 569 aaKnown RBP8.03□□□□□ -1.12
SCN9A-203ENST00000409672 TMPRSS12Q86WS5 348 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 PGAM4Q8N0Y7 254 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 FTMTQ8N4E7 242 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 FAM160A2Q8N612 972 aaPredicted RBP8.03□□□□□ -1.12
SCN9A-203ENST00000409672 GAB3Q8WWW8 586 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 SCGB3A2Q96PL1 93 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 TPT1P8Q9HAU6 139 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 DUSP13Q9UII6 198 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms