RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 C2orf42Q9NWW7 574 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 SOHLH2Q9NX45 425 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 ANKMY1Q9P2S6 941 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 ERRFI1Q9UJM3 462 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 POMT2Q9UKY4 750 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 TCF19Q9Y242 345 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 WDR37Q9Y2I8 494 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 TNS2Q63HR2 1409 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 MSGN1A6NI15 193 aa4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 KPNA7A9QM74 516 aa4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 KHDRBS3O75525 346 aaKnown RBP4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 AKR7A3O95154 331 aa4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 SYNGR4O95473 234 aa4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 PCCAP05165 728 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 B4GALT1P15291 398 aa4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 RPA1P27694 616 aa4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 GJB2P29033 226 aa4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 CCKARP32238 428 aa4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 OR1D2P34982 312 aa4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 FEN1P39748 380 aaKnown RBP4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 TSFMP43897 325 aaKnown RBP4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 ABCE1P61221 599 aaKnown RBP4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 TIMM10P62072 90 aa4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 MFGE8Q08431 387 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 MSLNQ13421 630 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 OR1C1Q15619 314 aa4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 TRADDQ15628 312 aa4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 GPAT3Q53EU6 434 aa4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 RTL6Q6ICC9 239 aa4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 FIP1L1Q6UN15 594 aaKnown RBP4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 KIF6Q6ZMV9 814 aa4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 C5orf24Q7Z6I8 188 aa4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 ZNF589Q86UQ0 364 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 LACC1Q8IV20 430 aa4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 CIARTQ8N365 385 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 ZNF843Q8N446 348 aa4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 MRPL38Q96DV4 380 aaKnown RBP4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 TAAR6Q96RI8 345 aa4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 FUNDC2Q9BWH2 189 aa4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 SIRPDQ9H106 197 aa4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 DPEP3Q9H4B8 488 aa4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 ATP13A3Q9H7F0 1226 aa4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 HPS4Q9NQG7 708 aa4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 SMC3Q9UQE7 1217 aa4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 STRCP1A6NGW2 1772 aa4.16□□□□□ -1.74
HMGB3P18-201ENST00000406327 RFX7Q2KHR2 1363 aa4.15□□□□□ -1.74
HMGB3P18-201ENST00000406327 MED23Q9ULK4 1368 aa4.15□□□□□ -1.74
HMGB3P18-201ENST00000406327 RGPD2P0DJD1 1756 aa4.15□□□□□ -1.74
HMGB3P18-201ENST00000406327 A0A087WW49 117 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 PMS2P5A8MQ11 134 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 ERVV-1B6SEH8 477 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 K7EPI3 171 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 P2RX6O15547 441 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 MLNRO43193 412 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 ECE2O60344 883 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 LMX1BO60663 402 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 SOCS5O75159 536 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 MBD3O95983 291 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 C4BPBP20851 252 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 SYT1P21579 422 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 MAGEA4P43358 317 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 CCL11P51671 97 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 DLX5P56178 289 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 KRTAP10-9P60411 292 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 MYBPC1Q00872 1141 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 PDIA5Q14554 519 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 SGSM1Q2NKQ1 1148 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 CCDC57Q2TAC2 916 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 RIPPLY2Q5TAB7 128 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 STPG1Q5TH74 334 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 BLOC1S2Q6QNY1 142 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 FAM159AQ6UWV7 190 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 Q6ZVQ6 151 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 SLC22A15Q8IZD6 547 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 LRRC17Q8N6Y2 441 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 OR4L1Q8NH43 312 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 SMPDL3AQ92484 453 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 FCGR1BQ92637 280 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 ZNF524Q96C55 264 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 NECTIN4Q96NY8 510 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 CBWD1Q9BRT8 395 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 PUS3Q9BZE2 481 aaKnown RBP4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 WWP1Q9H0M0 922 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 SLC26A1Q9H2B4 701 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 ECT2Q9H8V3 914 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 SLC52A3Q9NQ40 469 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 MED17Q9NVC6 651 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 CLIP2Q9UDT6 1046 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 BCAP29Q9UHQ4 241 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 LNPEPQ9UIQ6 1025 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 OR1A2Q9Y585 309 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 MAP3K15Q6ZN16 1313 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 KCPQ6ZWJ8 1503 aa4.15□□□□□ -1.75
HMGB3P18-201ENST00000406327 RPAP1Q9BWH6 1393 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 JCADQ9P266 1359 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 BCL9O00512 1426 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 A0A1B0GUL7 405 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 YJEFN3A6XGL0 299 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 KRTAP29-1A8MX34 341 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 F8WDY8 70 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms