RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 NKAIN2Q5VXU1 208 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 OR9A2Q8NGT5 310 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 MAL2Q969L2 176 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 CIDECQ96AQ7 238 aaPredicted RBP10.83□□□□□ -0.68
TTC28-201ENST00000397906 ZIC5Q96T25 663 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 SLC7A8Q9UHI5 535 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 ANHXE9PGG2 379 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 BRINP1O60477 761 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 LATS1O95835 1130 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 FAM78AQ5JUQ0 283 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 CST9Q5W186 159 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 PNPLA1Q8N8W4 532 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 C3orf58Q8NDZ4 430 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 FAM46AQ96IP4 442 aaKnown RBP10.83□□□□□ -0.68
TTC28-201ENST00000397906 WACQ9BTA9 647 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 NANSQ9NR45 359 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 NOP16Q9Y3C1 178 aaKnown RBP10.83□□□□□ -0.68
TTC28-201ENST00000397906 CNOT4O95628 575 aaKnown RBP10.83□□□□□ -0.68
TTC28-201ENST00000397906 ARSFP54793 590 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 MS4A4AQ96JQ5 239 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 DNMT3BQ9UBC3 853 aaKnown RBP10.83□□□□□ -0.68
TTC28-201ENST00000397906 A0A0A6YYC8 382 aaPredicted RBP10.83□□□□□ -0.68
TTC28-201ENST00000397906 PRSS38A1L453 326 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 I3L1I5 382 aaPredicted RBP10.83□□□□□ -0.68
TTC28-201ENST00000397906 SCAMP2O15127 329 aaKnown RBP10.83□□□□□ -0.68
TTC28-201ENST00000397906 TNFRSF4P43489 277 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 GPR143P51810 404 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 OGFRL1Q5TC84 451 aaPredicted RBP10.83□□□□□ -0.68
TTC28-201ENST00000397906 VRTNQ9H8Y1 702 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 ADAM18Q9Y3Q7 739 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 MYH3P11055 1940 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 MYH8P13535 1937 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 SLC9B1P1A6NJY1 282 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 GNRHRP30968 328 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 SLC26A5P58743 744 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 SLC36A3Q495N2 470 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 ATAD3CQ5T2N8 411 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 PRAMEF8Q5VWM4 474 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 PRAMEF7Q5VXH5 474 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 NANOGP8Q6NSW7 305 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 RABEPKQ7Z6M1 372 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 ANKLE1Q8NAG6 615 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 PHOSPHO2Q8TCD6 241 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 ZNF471Q9BX82 626 aaPredicted RBP10.82□□□□□ -0.68
TTC28-201ENST00000397906 ATG5Q9H1Y0 275 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 NANOGQ9H9S0 305 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 UBR2Q8IWV8 1755 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 H3BNX3 289 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 DFNA5O60443 496 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 PVALBP20472 110 aaPredicted RBP10.82□□□□□ -0.68
TTC28-201ENST00000397906 PTGER1P34995 402 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 ARL3P36405 182 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 ERVFC1P60507 584 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 S100A16Q96FQ6 103 aaKnown RBP10.82□□□□□ -0.68
TTC28-201ENST00000397906 SCGB3A2Q96PL1 93 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 SLC46A2Q9BY10 475 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 ALOXE3Q9BYJ1 711 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 ANKMY1Q9P2S6 941 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 AASSQ9UDR5 926 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 CAMK2AQ9UQM7 478 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 OTOL1A6NHN0 477 aaPredicted RBP10.82□□□□□ -0.68
TTC28-201ENST00000397906 ACY1Q03154 408 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 GTF2IRD2BQ6EKJ0 949 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 HMBOX1Q6NT76 420 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 GTF2IRD2Q86UP8 949 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 NELL2Q99435 816 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 ABCD2Q9UBJ2 740 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 CD38P28907 300 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 ABHD18Q0P651 414 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 ZFAND4Q86XD8 727 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 DUSP23Q9BVJ7 150 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 SORBS1Q9BX66 1292 aaKnown RBP10.82□□□□□ -0.68
TTC28-201ENST00000397906 PRAMEF2O60811 474 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 CDH15P55291 814 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 TECRLQ5HYJ1 363 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 UBE2Q1Q7Z7E8 422 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 ARRDC3Q96B67 414 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 PKP2Q99959 881 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 ZNF350Q9GZX5 532 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 ZNF700Q9H0M5 742 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 CXXC1Q9P0U4 656 aaPredicted RBP10.82□□□□□ -0.68
TTC28-201ENST00000397906 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.82□□□□□ -0.68
TTC28-201ENST00000397906 FTMTQ8N4E7 242 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 SLCO2A1Q92959 643 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 BEX2Q9BXY8 128 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 BEX1Q9HBH7 125 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 CCDC59Q9P031 241 aaKnown RBP10.82□□□□□ -0.68
TTC28-201ENST00000397906 ALG10BQ5I7T1 473 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 ZSWIM9Q86XI8 627 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 CLECL1Q8IZS7 167 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 SLC44A3Q8N4M1 653 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 SFXN2Q96NB2 322 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 SLC6A7Q99884 636 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 RDH14Q9HBH5 336 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 ACTR10Q9NZ32 417 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 LRRC37A3O60309 1634 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 SEMA3DO95025 777 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 HRGP04196 525 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 AKR1D1P51857 326 aa10.82□□□□□ -0.68
TTC28-201ENST00000397906 ERV3-1Q14264 604 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms