RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 BCKDKO14874 412 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 TLX3O43711 291 aaPredicted RBP7.83□□□□□ -1.16
PTPRD-204ENST00000397606 DBIP07108 87 aaKnown RBP7.83□□□□□ -1.16
PTPRD-204ENST00000397606 CEACAM7Q14002 265 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 PDK3Q15120 406 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 TAF13Q15543 124 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 BTBD16Q32M84 506 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 UGT3A2Q3SY77 523 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 FAM180BQ6P0A1 224 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 ADCK1Q86TW2 530 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 BPHLQ86WA6 291 aaPredicted RBP7.83□□□□□ -1.16
PTPRD-204ENST00000397606 ZNF547Q8IVP9 402 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 OR8J2Q8NGG1 315 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 OR2T11Q8NH01 316 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 SFXN5Q8TD22 340 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 GRHL3Q8TE85 626 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 RNF31Q96EP0 1072 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 MCHR1Q99705 422 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 MTHFD2LQ9H903 347 aaPredicted RBP7.83□□□□□ -1.16
PTPRD-204ENST00000397606 ATG2BQ96BY7 2078 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 KRBA1A5PL33 1030 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 LRIT2A6NDA9 550 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 PROM1O43490 865 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 ACPPP15309 386 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 FPR1P21462 350 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 BCKDHBP21953 392 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 TCEA1P23193 301 aaKnown RBP7.82□□□□□ -1.16
PTPRD-204ENST00000397606 TACR1P25103 407 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 ITGA3P26006 1051 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 CHN2P52757 468 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 KLHL12Q53G59 568 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 ZNF440Q8IYI8 595 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 ZNF540Q8NDQ6 660 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 OR52P1PQ8NH57 321 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 SLC7A6OSQ96CW6 309 aaPredicted RBP7.82□□□□□ -1.16
PTPRD-204ENST00000397606 TSC22D3Q99576 134 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 MAPKAP1Q9BPZ7 522 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 ADI1Q9BV57 179 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 ASIC5Q9NY37 505 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 SCHIP1Q9P0W5 487 aaPredicted RBP7.82□□□□□ -1.16
PTPRD-204ENST00000397606 PTGFRNQ9P2B2 879 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 WDR81Q562E7 1941 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 C2orf92A0A1B0GVN3 265 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 A0A1B0GX78 115 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 HCRTR2O43614 444 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 IGHEP01854 428 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 POU2F1P14859 743 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 ST6GAL1P15907 406 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 EPHA8P29322 1005 aaPredicted RBP7.82□□□□□ -1.16
PTPRD-204ENST00000397606 MAGEA8P43361 318 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 XKR7Q5GH72 579 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 HSDL2Q6YN16 418 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 ZCCHC7Q8N3Z6 543 aaKnown RBP7.82□□□□□ -1.16
PTPRD-204ENST00000397606 OR4C6Q8NH72 309 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 FAM81AQ8TBF8 368 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 DOK4Q8TEW6 326 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 SMPDL3BQ92485 455 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 TMEM19Q96HH6 336 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 DPH2Q9BQC3 489 aaPredicted RBP7.82□□□□□ -1.16
PTPRD-204ENST00000397606 ARHGAP9Q9BRR9 750 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 TRIM8Q9BZR9 551 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.82□□□□□ -1.16
PTPRD-204ENST00000397606 POMT2Q9UKY4 750 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 ERGIC3Q9Y282 383 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 MED31Q9Y3C7 131 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 MMACHCQ9Y4U1 282 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 R4GN57 208 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 NRG2O14511 850 aaPredicted RBP7.82□□□□□ -1.16
PTPRD-204ENST00000397606 HMGN2P05204 90 aaKnown RBP7.82□□□□□ -1.16
PTPRD-204ENST00000397606 PEX2P28328 305 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 COL9A2Q14055 689 aaPredicted RBP7.82□□□□□ -1.16
PTPRD-204ENST00000397606 TRAM2Q15035 370 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 ERMP1Q7Z2K6 904 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 WDR5BQ86VZ2 330 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 EPHX4Q8IUS5 362 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 PACRGLQ8N7B6 248 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 CD93Q9NPY3 652 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 DHCR7Q9UBM7 475 aaKnown RBP7.82□□□□□ -1.16
PTPRD-204ENST00000397606 PADI1Q9ULC6 663 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 RAB26Q9ULW5 256 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 BRWD1Q9NSI6 2320 aa7.82□□□□□ -1.16
PTPRD-204ENST00000397606 GNB5O14775 395 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 SIGLEC6O43699 453 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 C1QAP02745 245 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 DAG1Q14118 895 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 VEZF1Q14119 521 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 GPR19Q15760 415 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 GTDC1Q4AE62 458 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 CRB2Q5IJ48 1285 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 PDSS1Q5T2R2 415 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 TMEM71Q6P5X7 295 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 FIGNL1Q6PIW4 674 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 FAM220AQ7Z4H9 259 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 VN1R5Q7Z5H4 357 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 CARM1Q86X55 608 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 OR10H5Q8NGA6 315 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 CCDC115Q96NT0 180 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 TRIM2Q9C040 744 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 LYRM4Q9HD34 91 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 VAPAQ9P0L0 249 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms