RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 PYGBP11216 843 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 CNTFP26441 200 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 GALNSP34059 522 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 FOXA1P55317 472 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 KRTAP10-9P60411 292 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 PLIN5Q00G26 463 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 CLCQ05315 142 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 TFF3Q07654 80 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 KRTAP21-3Q3LHN1 58 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 PRAMEF20Q5VT98 475 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 FNDC7Q5VTL7 733 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 FAM111BQ6SJ93 734 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 CYP20A1Q6UW02 462 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 SPNS3Q6ZMD2 512 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 TRILQ7L0X0 811 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 TRMT10CQ7L0Y3 403 aaKnown RBP8.15□□□□□ -1.1
ATG4A-205ENST00000394892 CDH24Q86UP0 819 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 NUDT13Q86X67 352 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 CDYL2Q8N8U2 506 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 GOLM1Q8NBJ4 401 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 OR5L2Q8NGL0 311 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 OR5M9Q8NGP3 310 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 PHF10Q8WUB8 498 aaKnown RBP8.15□□□□□ -1.1
ATG4A-205ENST00000394892 RIT1Q92963 219 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 ATP6V1E2Q96A05 226 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 REPS1Q96D71 796 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 SPACA9Q96E40 222 aaPredicted RBP8.15□□□□□ -1.1
ATG4A-205ENST00000394892 C11orf24Q96F05 449 aaPredicted RBP8.15□□□□□ -1.1
ATG4A-205ENST00000394892 RBM18Q96H35 190 aaKnown RBP8.15□□□□□ -1.1
ATG4A-205ENST00000394892 SGCZQ96LD1 299 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 ZNF681Q96N22 645 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 KCNA7Q96RP8 456 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 TREX2Q9BQ50 279 aaPredicted RBP8.15□□□□□ -1.1
ATG4A-205ENST00000394892 FAM173AQ9BQD7 235 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 TSPYL1Q9H0U9 437 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 PNPLA3Q9NST1 481 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 SPRR3Q9UBC9 169 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 ZNF639Q9UID6 485 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 ADAM29Q9UKF5 820 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 PCDHA9Q9Y5H5 950 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 FAM215AQ9Y5M1 114 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 SPACA6W5XKT8 324 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 C2CD3Q4AC94 2353 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 B4DXG7 233 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 NPIPA2E9PIF3 369 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 NPIPA3F8WFD2 350 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 OR10H2O60403 315 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 TRIM3O75382 744 aaPredicted RBP8.14□□□□□ -1.11
ATG4A-205ENST00000394892 CBX7O95931 251 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 OTCP00480 354 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 TPOP07202 933 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 CPMP14384 443 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 IMPDH1P20839 514 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 TLX1P31314 330 aaPredicted RBP8.14□□□□□ -1.11
ATG4A-205ENST00000394892 BUD31P41223 144 aaPredicted RBP8.14□□□□□ -1.11
ATG4A-205ENST00000394892 XKP51811 444 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 PRKAA2P54646 552 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 NUP107P57740 925 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 FBXW4P57775 412 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 LTB4RQ15722 352 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 NTRK2Q16620 822 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 PRICKLE4Q2TBC4 344 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 GXYLT1Q4G148 440 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 TEX35Q5T0J7 233 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 CCNYL2Q5T2Q4 361 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 OR52E8Q6IFG1 317 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 SLC48A1Q6P1K1 146 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 OPN5Q6U736 354 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 SCIMPQ6UWF3 145 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 CEP128Q6ZU80 1094 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 FAM47EQ6ZV65 393 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 SEM1Q6ZVN7 128 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 CCDC71Q8IV32 467 aaPredicted RBP8.14□□□□□ -1.11
ATG4A-205ENST00000394892 C1orf52Q8N6N3 182 aaKnown RBP8.14□□□□□ -1.11
ATG4A-205ENST00000394892 MYRIPQ8NFW9 859 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 KIF18AQ8NI77 898 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 SELENOMQ8WWX9 145 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 CTHRC1Q96CG8 243 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 C14orf79Q96F83 325 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 CNRIP1Q96F85 164 aaPredicted RBP8.14□□□□□ -1.11
ATG4A-205ENST00000394892 APIPQ96GX9 242 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 GAL3ST4Q96RP7 486 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 ZNF382Q96SR6 550 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 SPOCK3Q9BQ16 436 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 CENPKQ9BS16 269 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 ACPTQ9BZG2 426 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 UCK2Q9BZX2 261 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 NXF5Q9H1B4 397 aaKnown RBP8.14□□□□□ -1.11
ATG4A-205ENST00000394892 GSTO2Q9H4Y5 243 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 ANKRA2Q9H9E1 313 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 IL1RL2Q9HB29 575 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 NPDC1Q9NQX5 325 aaPredicted RBP8.14□□□□□ -1.11
ATG4A-205ENST00000394892 SACM1LQ9NTJ5 587 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 MAT2BQ9NZL9 334 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 COPS7AQ9UBW8 275 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 TRPS1Q9UHF7 1281 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 TMCO1Q9UM00 188 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 SLC12A4Q9UP95 1085 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 EXO1Q9UQ84 846 aaKnown RBP8.14□□□□□ -1.11
ATG4A-205ENST00000394892 TIMM22Q9Y584 194 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms