RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 HNRNPA1P09651 372 aaKnown RBP eCLIP15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 OSMP13725 252 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 MAT2AP31153 395 aaKnown RBP15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 TIE1P35590 1138 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 SOX9P48436 509 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 PSPHP78330 225 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 PIN1Q13526 163 aaPredicted RBP15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 ZFP69Q49AA0 526 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 HIST2H2AA3Q6FI13 130 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 REEP3Q6NUK4 255 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 NANOGNBQ7Z5D8 188 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 ADGRF3Q8IZF5 1079 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 OR9Q1Q8NGQ5 310 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 KLHL6Q8WZ60 621 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 CHFRQ96EP1 664 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 MACROD1Q9BQ69 325 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 SRRQ9GZT4 340 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 XKR8Q9H6D3 395 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 MYNNQ9NPC7 610 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 TVP23BQ9NYZ1 205 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 MARK1Q9P0L2 795 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 PLXNA2O75051 1894 aa15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 A8MVJ9 347 aa15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 PRKYO43930 277 aa15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 IFNA14P01570 189 aa15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 EIF2S1P05198 315 aaKnown RBP15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 XKP51811 444 aa15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 CAV3P56539 151 aa15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 HOXC5Q00444 222 aa15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 C22orf42Q6IC83 251 aa15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 KIAA0907Q7Z7F0 614 aaPredicted RBP15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 ABI3BPQ7Z7G0 1075 aa15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 CHAC2Q8WUX2 184 aa15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 TMEM80Q96HE8 168 aa15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 FYTTD1Q96QD9 318 aaKnown RBP15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 PHOX2BQ99453 314 aa15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 ZCCHC2Q9C0B9 1178 aaKnown RBP15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 CCDC177Q9NQR7 707 aaPredicted RBP15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 DKK3Q9UBP4 350 aa15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 ANKRD34BA5PLL1 514 aa15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 NFATC1O95644 943 aa15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 CXCR2P25025 360 aa15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 PSMA1P25786 263 aaKnown RBP15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 RORCP51449 518 aa15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 LBX1P52954 281 aa15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 TARDBPQ13148 414 aaKnown RBP eCLIP15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 HNRNPA0Q13151 305 aaKnown RBP15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 ERN2Q76MJ5 926 aaKnown RBP15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 PHC2Q8IXK0 858 aa15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 FLCNQ8NFG4 579 aa15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 SLC7A13Q8TCU3 470 aa15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 TFGQ92734 400 aaPredicted RBP15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 TMCO6Q96DC7 493 aa15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 KXD1Q9BQD3 176 aa15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 C3orf14Q9HBI5 128 aa15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 FZD3Q9NPG1 666 aa15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 TRAPPC4Q9Y296 219 aa15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 KLHL20Q9Y2M5 609 aa15.4■□□□□ 0.06
NKX3-1-201ENST00000380871 EDDM13A0A1B0GTR0 161 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 MEIOCA2RUB1 952 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 TLX2O43763 284 aaPredicted RBP15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 RHAGQ02094 409 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 ELAVL3Q14576 367 aaKnown RBP15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 FAM214AQ32MH5 1076 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 TOR1AIP1Q5JTV8 583 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 LILRB4Q8NHJ6 448 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 JPH3Q8WXH2 748 aaPredicted RBP15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 MIXL1Q9H2W2 232 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 CUEDC1Q9NWM3 386 aaPredicted RBP15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 DNMT3AQ9Y6K1 912 aaPredicted RBP15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 TCF20Q9UGU0 1960 aaKnown RBP15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 WASHC1A8K0Z3 465 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 C5orf58C9J3I9 102 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 ZNF670-ZNF695F2Z2N8 137 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 H7BY64 318 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 M0R3H8 397 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 MID1O15344 667 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 MPZL2O60487 215 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 KRT75O95678 551 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 P2RY2P41231 377 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 HYAL2Q12891 473 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 THOC7Q6I9Y2 204 aaKnown RBP15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 PGBD2Q6P3X8 592 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 PSRC1Q6PGN9 363 aaPredicted RBP15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 FAM131AQ6UXB0 335 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 WASH2PQ6VEQ5 465 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 GLCCI1Q86VQ1 547 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 RAB43Q86YS6 212 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 SLC5A11Q8WWX8 675 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 REPS1Q96D71 796 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 PRAP1Q96NZ9 151 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 NLNQ9BYT8 704 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 OR2B2Q9GZK3 357 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 POLR2J3Q9H1A7 115 aaKnown RBP15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 SLC6A17Q9H1V8 727 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 WBP1LQ9NX94 342 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 PAQR5Q9NXK6 330 aaPredicted RBP15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 TMCC3Q9ULS5 477 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 A0A0B4J293 547 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 FOXE1O00358 373 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms