RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 MAU2Q9Y6X3 613 aa14.39□□□□□ -0.11
MSH5-203ENST00000375750 HMX3A6NHT5 357 aa14.39□□□□□ -0.11
MSH5-203ENST00000375750 B4DXG7 233 aa14.39□□□□□ -0.11
MSH5-203ENST00000375750 PRRT4C9JH25 899 aa14.39□□□□□ -0.11
MSH5-203ENST00000375750 GPC1P35052 558 aa14.39□□□□□ -0.11
MSH5-203ENST00000375750 RUNX1T1Q06455 604 aa14.39□□□□□ -0.11
MSH5-203ENST00000375750 DBPQ10586 325 aaPredicted RBP14.39□□□□□ -0.11
MSH5-203ENST00000375750 TARDBPQ13148 414 aaKnown RBP eCLIP14.39□□□□□ -0.11
MSH5-203ENST00000375750 PIN1Q13526 163 aaPredicted RBP14.39□□□□□ -0.11
MSH5-203ENST00000375750 PYDC2Q56P42 97 aa14.39□□□□□ -0.11
MSH5-203ENST00000375750 FAM71E1Q6IPT2 247 aa14.39□□□□□ -0.11
MSH5-203ENST00000375750 TCTN3Q6NUS6 607 aa14.39□□□□□ -0.11
MSH5-203ENST00000375750 TMEM220Q6QAJ8 160 aa14.39□□□□□ -0.11
MSH5-203ENST00000375750 USP30Q70CQ3 517 aa14.39□□□□□ -0.11
MSH5-203ENST00000375750 NANOGP1Q8N7R0 232 aa14.39□□□□□ -0.11
MSH5-203ENST00000375750 OR56A3Q8NH54 315 aa14.39□□□□□ -0.11
MSH5-203ENST00000375750 SMARCD2Q92925 531 aa14.39□□□□□ -0.11
MSH5-203ENST00000375750 RACGAP1Q9H0H5 632 aa14.39□□□□□ -0.11
MSH5-203ENST00000375750 GRIP1Q9Y3R0 1128 aa14.39□□□□□ -0.11
MSH5-203ENST00000375750 KCNE2Q9Y6J6 123 aa14.39□□□□□ -0.11
MSH5-203ENST00000375750 DSPPQ9NZW4 1301 aa14.38□□□□□ -0.11
MSH5-203ENST00000375750 ANTXRLA6NF34 631 aa14.38□□□□□ -0.11
MSH5-203ENST00000375750 FABP12A6NFH5 140 aa14.38□□□□□ -0.11
MSH5-203ENST00000375750 PLA2G10O15496 165 aa14.38□□□□□ -0.11
MSH5-203ENST00000375750 B4GALT2O60909 372 aa14.38□□□□□ -0.11
MSH5-203ENST00000375750 OSMP13725 252 aa14.38□□□□□ -0.11
MSH5-203ENST00000375750 ELAVL4P26378 380 aaKnown RBP14.38□□□□□ -0.11
MSH5-203ENST00000375750 APEX1P27695 318 aaKnown RBP14.38□□□□□ -0.11
MSH5-203ENST00000375750 ALDH9A1P49189 494 aa14.38□□□□□ -0.11
MSH5-203ENST00000375750 PTPN5P54829 565 aa14.38□□□□□ -0.11
MSH5-203ENST00000375750 RPS25P62851 125 aaKnown RBP14.38□□□□□ -0.11
MSH5-203ENST00000375750 RHAGQ02094 409 aa14.38□□□□□ -0.11
MSH5-203ENST00000375750 GLYR1Q49A26 553 aaPredicted RBP14.38□□□□□ -0.11
MSH5-203ENST00000375750 PRR14Q9BWN1 585 aa14.38□□□□□ -0.11
MSH5-203ENST00000375750 FZD3Q9NPG1 666 aa14.38□□□□□ -0.11
MSH5-203ENST00000375750 DMRT3Q9NQL9 472 aa14.38□□□□□ -0.11
MSH5-203ENST00000375750 GULP1Q9UBP9 304 aa14.38□□□□□ -0.11
MSH5-203ENST00000375750 SSR3Q9UNL2 185 aa14.38□□□□□ -0.11
MSH5-203ENST00000375750 SPIN1Q9Y657 262 aaPredicted RBP14.38□□□□□ -0.11
MSH5-203ENST00000375750 C2orf16Q68DN1 1984 aa14.38□□□□□ -0.11
MSH5-203ENST00000375750 HYKKA2RU49 373 aa14.38□□□□□ -0.11
MSH5-203ENST00000375750 WASHC1A8K0Z3 465 aa14.38□□□□□ -0.11
MSH5-203ENST00000375750 CPNE3O75131 537 aaKnown RBP14.38□□□□□ -0.11
MSH5-203ENST00000375750 NCR1O76036 304 aa14.38□□□□□ -0.11
MSH5-203ENST00000375750 ADH1CP00326 375 aa14.38□□□□□ -0.11
MSH5-203ENST00000375750 CATP04040 527 aaKnown RBP14.38□□□□□ -0.11
MSH5-203ENST00000375750 PTX3P26022 381 aaPredicted RBP14.38□□□□□ -0.11
MSH5-203ENST00000375750 SNRPD2P62316 118 aaKnown RBP14.38□□□□□ -0.11
MSH5-203ENST00000375750 TEKQ02763 1124 aa14.38□□□□□ -0.11
MSH5-203ENST00000375750 NFE2L1Q14494 772 aa14.38□□□□□ -0.11
MSH5-203ENST00000375750 INSL4Q14641 139 aa14.38□□□□□ -0.11
MSH5-203ENST00000375750 ZNF630Q2M218 657 aaPredicted RBP14.38□□□□□ -0.11
MSH5-203ENST00000375750 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.38□□□□□ -0.11
MSH5-203ENST00000375750 TOR1AIP1Q5JTV8 583 aa14.38□□□□□ -0.11
MSH5-203ENST00000375750 TANGO2Q6ICL3 276 aa14.38□□□□□ -0.11
MSH5-203ENST00000375750 WASH2PQ6VEQ5 465 aa14.38□□□□□ -0.11
MSH5-203ENST00000375750 NOXA1Q86UR1 476 aa14.38□□□□□ -0.11
MSH5-203ENST00000375750 KRT73Q86Y46 540 aa14.38□□□□□ -0.11
MSH5-203ENST00000375750 NLGN4YQ8NFZ3 816 aaPredicted RBP14.38□□□□□ -0.11
MSH5-203ENST00000375750 GATAD2BQ8WXI9 593 aa14.38□□□□□ -0.11
MSH5-203ENST00000375750 TMEM19Q96HH6 336 aa14.38□□□□□ -0.11
MSH5-203ENST00000375750 GPA33Q99795 319 aa14.38□□□□□ -0.11
MSH5-203ENST00000375750 POLR2J3Q9H1A7 115 aaKnown RBP14.38□□□□□ -0.11
MSH5-203ENST00000375750 SLC28A3Q9HAS3 691 aa14.38□□□□□ -0.11
MSH5-203ENST00000375750 SEC14L4Q9UDX3 406 aa14.38□□□□□ -0.11
MSH5-203ENST00000375750 NDRG2Q9UN36 371 aaKnown RBP14.38□□□□□ -0.11
MSH5-203ENST00000375750 SNX7Q9UNH6 387 aa14.38□□□□□ -0.11
MSH5-203ENST00000375750 ANGPT4Q9Y264 503 aa14.38□□□□□ -0.11
MSH5-203ENST00000375750 ATG2AQ2TAZ0 1938 aa14.38□□□□□ -0.11
MSH5-203ENST00000375750 PIPSLA2A3N6 862 aa14.37□□□□□ -0.11
MSH5-203ENST00000375750 CCDC182A6NF36 153 aa14.37□□□□□ -0.11
MSH5-203ENST00000375750 WASH3PC4AMC7 463 aa14.37□□□□□ -0.11
MSH5-203ENST00000375750 M0R3H8 397 aa14.37□□□□□ -0.11
MSH5-203ENST00000375750 ERVH48-1M5A8F1 160 aa14.37□□□□□ -0.11
MSH5-203ENST00000375750 SH3BP5O60239 455 aa14.37□□□□□ -0.11
MSH5-203ENST00000375750 TSPAN19P0C672 248 aa14.37□□□□□ -0.11
MSH5-203ENST00000375750 HSD3B1P14060 373 aa14.37□□□□□ -0.11
MSH5-203ENST00000375750 MYL9P24844 172 aa14.37□□□□□ -0.11
MSH5-203ENST00000375750 HSD3B2P26439 372 aa14.37□□□□□ -0.11
MSH5-203ENST00000375750 RBBP4Q09028 425 aa14.37□□□□□ -0.11
MSH5-203ENST00000375750 HSPB3Q12988 150 aa14.37□□□□□ -0.11
MSH5-203ENST00000375750 GPAT3Q53EU6 434 aa14.37□□□□□ -0.11
MSH5-203ENST00000375750 ACSM5Q6NUN0 579 aa14.37□□□□□ -0.11
MSH5-203ENST00000375750 CASP12Q6UXS9 341 aa14.37□□□□□ -0.11
MSH5-203ENST00000375750 DTX3Q8N9I9 347 aa14.37□□□□□ -0.11
MSH5-203ENST00000375750 APOBEC4Q8WW27 367 aaKnown RBP14.37□□□□□ -0.11
MSH5-203ENST00000375750 DCLRE1CQ96SD1 692 aaKnown RBP14.37□□□□□ -0.11
MSH5-203ENST00000375750 NELL2Q99435 816 aa14.37□□□□□ -0.11
MSH5-203ENST00000375750 ZDHHC4Q9NPG8 344 aa14.37□□□□□ -0.11
MSH5-203ENST00000375750 NDUFB11Q9NX14 153 aa14.37□□□□□ -0.11
MSH5-203ENST00000375750 COMMD3Q9UBI1 195 aa14.37□□□□□ -0.11
MSH5-203ENST00000375750 TMCC3Q9ULS5 477 aa14.37□□□□□ -0.11
MSH5-203ENST00000375750 GPR52Q9Y2T5 361 aa14.37□□□□□ -0.11
MSH5-203ENST00000375750 CLCA3PQ9Y6N3 262 aa14.37□□□□□ -0.11
MSH5-203ENST00000375750 OR6C70A6NIJ9 312 aa14.37□□□□□ -0.11
MSH5-203ENST00000375750 AKR7A2O43488 359 aa14.37□□□□□ -0.11
MSH5-203ENST00000375750 POLR2LP62875 67 aaKnown RBP14.37□□□□□ -0.11
MSH5-203ENST00000375750 SCN1BQ07699 218 aa14.37□□□□□ -0.11
MSH5-203ENST00000375750 GAB4Q2WGN9 574 aa14.37□□□□□ -0.11
MSH5-203ENST00000375750 DCST1Q5T197 706 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms