RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 CLMPQ9H6B4 373 aa15.22■□□□□ 0.03
TMEM53-203ENST00000372242 ANKRA2Q9H9E1 313 aa15.22■□□□□ 0.03
TMEM53-203ENST00000372242 ERVK-19Q9WJR5 959 aa15.22■□□□□ 0.03
TMEM53-203ENST00000372242 GPX3P22352 226 aa15.22■□□□□ 0.03
TMEM53-203ENST00000372242 ITGA3P26006 1051 aa15.22■□□□□ 0.03
TMEM53-203ENST00000372242 SOX18P35713 384 aa15.22■□□□□ 0.03
TMEM53-203ENST00000372242 GPR143P51810 404 aa15.22■□□□□ 0.03
TMEM53-203ENST00000372242 DGKQP52824 942 aa15.22■□□□□ 0.03
TMEM53-203ENST00000372242 CLNS1AP54105 237 aaKnown RBP15.22■□□□□ 0.03
TMEM53-203ENST00000372242 STX1BP61266 288 aa15.22■□□□□ 0.03
TMEM53-203ENST00000372242 HSPB3Q12988 150 aa15.22■□□□□ 0.03
TMEM53-203ENST00000372242 EXT1Q16394 746 aa15.22■□□□□ 0.03
TMEM53-203ENST00000372242 TBR1Q16650 682 aa15.22■□□□□ 0.03
TMEM53-203ENST00000372242 PRICKLE4Q2TBC4 344 aa15.22■□□□□ 0.03
TMEM53-203ENST00000372242 FAM174BQ3ZCQ3 159 aa15.22■□□□□ 0.03
TMEM53-203ENST00000372242 OR4F3Q6IEY1 312 aa15.22■□□□□ 0.03
TMEM53-203ENST00000372242 GPR155Q7Z3F1 870 aa15.22■□□□□ 0.03
TMEM53-203ENST00000372242 APCDD1LQ8NCL9 501 aa15.22■□□□□ 0.03
TMEM53-203ENST00000372242 SIMC1Q8NDZ2 872 aa15.22■□□□□ 0.03
TMEM53-203ENST00000372242 C7orf57Q8NEG2 295 aa15.22■□□□□ 0.03
TMEM53-203ENST00000372242 APOBEC4Q8WW27 367 aaKnown RBP15.22■□□□□ 0.03
TMEM53-203ENST00000372242 NCLNQ969V3 563 aa15.22■□□□□ 0.03
TMEM53-203ENST00000372242 TESCQ96BS2 214 aa15.22■□□□□ 0.03
TMEM53-203ENST00000372242 THOC3Q96J01 351 aaKnown RBP15.22■□□□□ 0.03
TMEM53-203ENST00000372242 DUSP26Q9BV47 211 aa15.22■□□□□ 0.03
TMEM53-203ENST00000372242 ATAD3AQ9NVI7 634 aa15.22■□□□□ 0.03
TMEM53-203ENST00000372242 MAT2BQ9NZL9 334 aa15.22■□□□□ 0.03
TMEM53-203ENST00000372242 TRIM33Q9UPN9 1127 aa15.22■□□□□ 0.03
TMEM53-203ENST00000372242 NBEAQ8NFP9 2946 aa15.21■□□□□ 0.03
TMEM53-203ENST00000372242 ATMQ13315 3056 aa15.21■□□□□ 0.03
TMEM53-203ENST00000372242 DYRK3O43781 588 aa15.21■□□□□ 0.03
TMEM53-203ENST00000372242 ITGAMP11215 1152 aa15.21■□□□□ 0.03
TMEM53-203ENST00000372242 CD1EP15812 388 aa15.21■□□□□ 0.03
TMEM53-203ENST00000372242 SSTR4P31391 388 aa15.21■□□□□ 0.03
TMEM53-203ENST00000372242 ZFP36L2P47974 494 aaKnown RBP15.21■□□□□ 0.03
TMEM53-203ENST00000372242 PHC1P78364 1004 aa15.21■□□□□ 0.03
TMEM53-203ENST00000372242 MGAT2Q10469 447 aa15.21■□□□□ 0.03
TMEM53-203ENST00000372242 TRMT12Q53H54 448 aaKnown RBP15.21■□□□□ 0.03
TMEM53-203ENST00000372242 BORAQ6PGQ7 559 aa15.21■□□□□ 0.03
TMEM53-203ENST00000372242 CAMKMTQ7Z624 323 aa15.21■□□□□ 0.03
TMEM53-203ENST00000372242 KBTBD2Q8IY47 623 aa15.21■□□□□ 0.03
TMEM53-203ENST00000372242 GALNT16Q8N428 558 aa15.21■□□□□ 0.03
TMEM53-203ENST00000372242 MORN4Q8NDC4 146 aa15.21■□□□□ 0.03
TMEM53-203ENST00000372242 ZNF721Q8TF20 911 aa15.21■□□□□ 0.03
TMEM53-203ENST00000372242 FBXL20Q96IG2 436 aa15.21■□□□□ 0.03
TMEM53-203ENST00000372242 NUDT9Q9BW91 350 aa15.21■□□□□ 0.03
TMEM53-203ENST00000372242 EPN3Q9H201 632 aa15.21■□□□□ 0.03
TMEM53-203ENST00000372242 ZIM2Q9NZV7 527 aa15.21■□□□□ 0.03
TMEM53-203ENST00000372242 ZNF223Q9UK11 482 aaPredicted RBP15.21■□□□□ 0.03
TMEM53-203ENST00000372242 MAPRE3Q9UPY8 281 aa15.21■□□□□ 0.03
TMEM53-203ENST00000372242 EPG5Q9HCE0 2579 aa15.2■□□□□ 0.02
TMEM53-203ENST00000372242 SNX3O60493 162 aa15.2■□□□□ 0.02
TMEM53-203ENST00000372242 SHOX2O60902 331 aaPredicted RBP15.2■□□□□ 0.02
TMEM53-203ENST00000372242 SERPINA7P05543 415 aa15.2■□□□□ 0.02
TMEM53-203ENST00000372242 ICAM2P13598 275 aa15.2■□□□□ 0.02
TMEM53-203ENST00000372242 PCSK2P16519 638 aa15.2■□□□□ 0.02
TMEM53-203ENST00000372242 GALNSP34059 522 aa15.2■□□□□ 0.02
TMEM53-203ENST00000372242 FRKP42685 505 aaPredicted RBP15.2■□□□□ 0.02
TMEM53-203ENST00000372242 KIR3DL1P43629 444 aa15.2■□□□□ 0.02
TMEM53-203ENST00000372242 MANFP55145 182 aaKnown RBP15.2■□□□□ 0.02
TMEM53-203ENST00000372242 EXOSC7Q15024 291 aaKnown RBP15.2■□□□□ 0.02
TMEM53-203ENST00000372242 SPRED3Q2MJR0 410 aa15.2■□□□□ 0.02
TMEM53-203ENST00000372242 ZNF628Q5EBL2 1059 aa15.2■□□□□ 0.02
TMEM53-203ENST00000372242 METTL21CQ5VZV1 264 aa15.2■□□□□ 0.02
TMEM53-203ENST00000372242 APLFQ8IW19 511 aaPredicted RBP15.2■□□□□ 0.02
TMEM53-203ENST00000372242 VWA5B2Q8N398 1253 aa15.2■□□□□ 0.02
TMEM53-203ENST00000372242 OR1N1Q8NGS0 311 aa15.2■□□□□ 0.02
TMEM53-203ENST00000372242 M1APQ8TC57 530 aa15.2■□□□□ 0.02
TMEM53-203ENST00000372242 ZBED6CLQ96FA7 236 aaPredicted RBP15.2■□□□□ 0.02
TMEM53-203ENST00000372242 ZBTB18Q99592 522 aa15.2■□□□□ 0.02
TMEM53-203ENST00000372242 BHLHE41Q9C0J9 482 aaPredicted RBP15.2■□□□□ 0.02
TMEM53-203ENST00000372242 ZNF385DQ9H6B1 395 aa15.2■□□□□ 0.02
TMEM53-203ENST00000372242 MMP25Q9NPA2 562 aa15.2■□□□□ 0.02
TMEM53-203ENST00000372242 CCDC167Q9P0B6 97 aa15.2■□□□□ 0.02
TMEM53-203ENST00000372242 PPIEQ9UNP9 301 aaKnown RBP15.2■□□□□ 0.02
TMEM53-203ENST00000372242 A0A1W2PRB8 838 aa15.2■□□□□ 0.02
TMEM53-203ENST00000372242 IGKV3-11P04433 115 aa15.2■□□□□ 0.02
TMEM53-203ENST00000372242 S1PR1P21453 382 aa15.2■□□□□ 0.02
TMEM53-203ENST00000372242 S100A3P33764 101 aa15.2■□□□□ 0.02
TMEM53-203ENST00000372242 WNT3P56703 355 aa15.2■□□□□ 0.02
TMEM53-203ENST00000372242 SRSF11Q05519 484 aaKnown RBP15.2■□□□□ 0.02
TMEM53-203ENST00000372242 MAP4K2Q12851 820 aa15.2■□□□□ 0.02
TMEM53-203ENST00000372242 SQLEQ14534 574 aa15.2■□□□□ 0.02
TMEM53-203ENST00000372242 C6orf163Q5TEZ5 329 aa15.2■□□□□ 0.02
TMEM53-203ENST00000372242 TMEM107Q6UX40 140 aa15.2■□□□□ 0.02
TMEM53-203ENST00000372242 ANKRD46Q86W74 232 aa15.2■□□□□ 0.02
TMEM53-203ENST00000372242 CLECL1Q8IZS7 167 aa15.2■□□□□ 0.02
TMEM53-203ENST00000372242 SIRT6Q8N6T7 355 aa15.2■□□□□ 0.02
TMEM53-203ENST00000372242 OR7G2Q8NG99 324 aa15.2■□□□□ 0.02
TMEM53-203ENST00000372242 OR8J2Q8NGG1 315 aa15.2■□□□□ 0.02
TMEM53-203ENST00000372242 BRIX1Q8TDN6 353 aaKnown RBP15.2■□□□□ 0.02
TMEM53-203ENST00000372242 ELP5Q8TE02 316 aa15.2■□□□□ 0.02
TMEM53-203ENST00000372242 THAP3Q8WTV1 239 aaPredicted RBP15.2■□□□□ 0.02
TMEM53-203ENST00000372242 CTHRC1Q96CG8 243 aa15.2■□□□□ 0.02
TMEM53-203ENST00000372242 VMP1Q96GC9 406 aa15.2■□□□□ 0.02
TMEM53-203ENST00000372242 MAGED4Q96JG8 741 aa15.2■□□□□ 0.02
TMEM53-203ENST00000372242 ACSS1Q9NUB1 689 aaPredicted RBP15.2■□□□□ 0.02
TMEM53-203ENST00000372242 DOCK10Q96BY6 2186 aa15.19■□□□□ 0.02
TMEM53-203ENST00000372242 TRBV11-1A0A0K0K1C0 115 aa15.19■□□□□ 0.02
TMEM53-203ENST00000372242 A8MUI8 341 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms