RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 POFUT2Q9Y2G5 429 aa13.05□□□□□ -0.32
SHC1-202ENST00000368445 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.05□□□□□ -0.32
SHC1-202ENST00000368445 PCDHGA2Q9Y5H1 932 aa13.05□□□□□ -0.32
SHC1-202ENST00000368445 PFDN1O60925 122 aa13.05□□□□□ -0.32
SHC1-202ENST00000368445 CELA2BP08218 269 aaPredicted RBP13.05□□□□□ -0.32
SHC1-202ENST00000368445 RHCEP18577 417 aa13.05□□□□□ -0.32
SHC1-202ENST00000368445 CD247P20963 164 aa13.05□□□□□ -0.32
SHC1-202ENST00000368445 RYKP34925 604 aa13.05□□□□□ -0.32
SHC1-202ENST00000368445 MLLT1Q03111 559 aaPredicted RBP13.05□□□□□ -0.32
SHC1-202ENST00000368445 POLR2J3Q9H1A7 115 aaKnown RBP13.05□□□□□ -0.32
SHC1-202ENST00000368445 PRDM7Q9NQW5 492 aa13.05□□□□□ -0.32
SHC1-202ENST00000368445 ACER3Q9NUN7 267 aa13.05□□□□□ -0.32
SHC1-202ENST00000368445 GPR83Q9NYM4 423 aa13.05□□□□□ -0.32
SHC1-202ENST00000368445 LOC105369274A0A096LPK9 316 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 LOC102723532A0A0G2JNH3 316 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 PRAMEF25A6NGN4 478 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 CDC123O75794 336 aaPredicted RBP13.04□□□□□ -0.32
SHC1-202ENST00000368445 IGFBP1P08833 259 aaPredicted RBP13.04□□□□□ -0.32
SHC1-202ENST00000368445 CCDC159P0C7I6 412 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 ITGAMP11215 1152 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 ERGP11308 486 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 CDK4P11802 303 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 CDH3P22223 829 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 VBP1P61758 197 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 MRPS21P82921 87 aaKnown RBP13.04□□□□□ -0.32
SHC1-202ENST00000368445 COLEC12Q5KU26 742 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 CASP12Q6UXS9 341 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 OR4N4Q8N0Y3 316 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 OCEL1Q9H607 264 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 ACTR10Q9NZ32 417 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 RNF6Q9Y252 685 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 AP1M2Q9Y6Q5 423 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 PLXND1Q9Y4D7 1925 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 B3GALT2O43825 422 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 B4GALT2O60909 372 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 IFNA8P32881 189 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 KHKP50053 298 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 UGT2B15P54855 530 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 TAS2R41P59536 307 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 PUM1Q14671 1186 aaKnown RBP eCLIP13.04□□□□□ -0.32
SHC1-202ENST00000368445 MED22Q15528 200 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 GPR68Q15743 365 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 CRB2Q5IJ48 1285 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 ZNF311Q5JNZ3 666 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 SAXO2Q658L1 398 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 PIWIL3Q7Z3Z3 882 aaKnown RBP13.04□□□□□ -0.32
SHC1-202ENST00000368445 ZNF438Q7Z4V0 828 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 ADCK1Q86TW2 530 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 CACTIN-AS1Q8N1I8 211 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 SVOPQ8N4V2 548 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 EXOSC4Q9NPD3 245 aaKnown RBP13.04□□□□□ -0.32
SHC1-202ENST00000368445 CPNE7Q9UBL6 633 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 KCNE3Q9Y6H6 103 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 A0A0A6YYD5 115 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 MAN2B1O00754 1011 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 KCNJ13O60928 360 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 HTR1AP08908 422 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 TFPTP0C1Z6 253 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 UGT2B7P16662 529 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 LIM2P55344 173 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 ZC3H12BQ5HYM0 836 aaKnown RBP13.04□□□□□ -0.32
SHC1-202ENST00000368445 ENTHD1Q8IYW4 607 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 NATD1Q8N6N6 113 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 TSTD1Q8NFU3 115 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 OR13F1Q8NGS4 319 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 DNASE1L2Q92874 299 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 C8orf33Q9H7E9 229 aaPredicted RBP13.04□□□□□ -0.32
SHC1-202ENST00000368445 SIRT3Q9NTG7 399 aaPredicted RBP13.04□□□□□ -0.32
SHC1-202ENST00000368445 TVP23BQ9NYZ1 205 aa13.04□□□□□ -0.32
SHC1-202ENST00000368445 WBP11Q9Y2W2 641 aaKnown RBP13.04□□□□□ -0.32
SHC1-202ENST00000368445 SPAG17Q6Q759 2223 aa13.03□□□□□ -0.32
SHC1-202ENST00000368445 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.03□□□□□ -0.32
SHC1-202ENST00000368445 URADA6NGE7 173 aa13.03□□□□□ -0.32
SHC1-202ENST00000368445 CPSF4LA6NMK7 179 aaKnown RBP13.03□□□□□ -0.32
SHC1-202ENST00000368445 J3QRK9 145 aa13.03□□□□□ -0.32
SHC1-202ENST00000368445 STSP08842 583 aa13.03□□□□□ -0.32
SHC1-202ENST00000368445 AHRP35869 848 aa13.03□□□□□ -0.32
SHC1-202ENST00000368445 KEAP1Q14145 624 aa13.03□□□□□ -0.32
SHC1-202ENST00000368445 SUZ12Q15022 739 aaKnown RBP13.03□□□□□ -0.32
SHC1-202ENST00000368445 PTGES3Q15185 160 aaKnown RBP13.03□□□□□ -0.32
SHC1-202ENST00000368445 XAF1Q6GPH4 301 aa13.03□□□□□ -0.32
SHC1-202ENST00000368445 USP30Q70CQ3 517 aa13.03□□□□□ -0.32
SHC1-202ENST00000368445 TDHQ8IZJ6 230 aa13.03□□□□□ -0.32
SHC1-202ENST00000368445 RAB2BQ8WUD1 216 aa13.03□□□□□ -0.32
SHC1-202ENST00000368445 AICDAQ9GZX7 198 aa13.03□□□□□ -0.32
SHC1-202ENST00000368445 ACSS1Q9NUB1 689 aaPredicted RBP13.03□□□□□ -0.32
SHC1-202ENST00000368445 MS4A12Q9NXJ0 267 aa13.03□□□□□ -0.32
SHC1-202ENST00000368445 PCDHGA6Q9Y5G7 932 aa13.03□□□□□ -0.32
SHC1-202ENST00000368445 SPACA6W5XKT8 324 aa13.03□□□□□ -0.32
SHC1-202ENST00000368445 MDC1Q14676 2089 aaKnown RBP13.03□□□□□ -0.32
SHC1-202ENST00000368445 CTSVO60911 334 aa13.03□□□□□ -0.32
SHC1-202ENST00000368445 CNR2P34972 360 aa13.03□□□□□ -0.32
SHC1-202ENST00000368445 PCBP4P57723 403 aaKnown RBP13.03□□□□□ -0.32
SHC1-202ENST00000368445 RPS15AP62244 130 aaKnown RBP13.03□□□□□ -0.32
SHC1-202ENST00000368445 DUSP2Q05923 314 aa13.03□□□□□ -0.32
SHC1-202ENST00000368445 NFATC3Q12968 1075 aa13.03□□□□□ -0.32
SHC1-202ENST00000368445 MLIPQ5VWP3 458 aa13.03□□□□□ -0.32
SHC1-202ENST00000368445 TSEN54Q7Z6J9 526 aaKnown RBP13.03□□□□□ -0.32
SHC1-202ENST00000368445 DEPDC4Q8N2C3 294 aa13.03□□□□□ -0.32
SHC1-202ENST00000368445 CLIP4Q8N3C7 705 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms