RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 RPL6Q02878 288 aaKnown RBP18.65■□□□□ 0.58
TRIM58-201ENST00000366481 ZNF91Q05481 1191 aa18.65■□□□□ 0.58
TRIM58-201ENST00000366481 DBPQ10586 325 aaPredicted RBP18.65■□□□□ 0.58
TRIM58-201ENST00000366481 GALEQ14376 348 aa18.65■□□□□ 0.58
TRIM58-201ENST00000366481 TOR1AIP1Q5JTV8 583 aa18.65■□□□□ 0.58
TRIM58-201ENST00000366481 CRIPAKQ8N1N5 446 aa18.65■□□□□ 0.58
TRIM58-201ENST00000366481 OR4M2Q8NGB6 313 aa18.65■□□□□ 0.58
TRIM58-201ENST00000366481 RIT1Q92963 219 aa18.65■□□□□ 0.58
TRIM58-201ENST00000366481 PIP5K1AQ99755 562 aa18.65■□□□□ 0.58
TRIM58-201ENST00000366481 PLEKHB1Q9UF11 243 aaPredicted RBP18.65■□□□□ 0.58
TRIM58-201ENST00000366481 SH2B3Q9UQQ2 575 aa18.65■□□□□ 0.58
TRIM58-201ENST00000366481 TOXO94900 526 aa18.65■□□□□ 0.58
TRIM58-201ENST00000366481 NR2F6P10588 404 aa18.65■□□□□ 0.58
TRIM58-201ENST00000366481 LIMK1P53667 647 aa18.65■□□□□ 0.58
TRIM58-201ENST00000366481 RAB8AP61006 207 aa18.65■□□□□ 0.58
TRIM58-201ENST00000366481 ZNF385BQ569K4 471 aa18.65■□□□□ 0.58
TRIM58-201ENST00000366481 GCNT6Q5T4J0 391 aa18.65■□□□□ 0.58
TRIM58-201ENST00000366481 AGTRAPQ6RW13 159 aa18.65■□□□□ 0.58
TRIM58-201ENST00000366481 ZNF783Q6ZMS7 281 aa18.65■□□□□ 0.58
TRIM58-201ENST00000366481 TSEN54Q7Z6J9 526 aaKnown RBP18.65■□□□□ 0.58
TRIM58-201ENST00000366481 WRAP53Q9BUR4 548 aaKnown RBP18.65■□□□□ 0.58
TRIM58-201ENST00000366481 C1QTNF7Q9BXJ2 289 aa18.65■□□□□ 0.58
TRIM58-201ENST00000366481 RDH8Q9NYR8 311 aa18.65■□□□□ 0.58
TRIM58-201ENST00000366481 SLC9A8Q9Y2E8 581 aa18.65■□□□□ 0.58
TRIM58-201ENST00000366481 CCL16O15467 120 aa18.64■□□□□ 0.58
TRIM58-201ENST00000366481 SOCS5O75159 536 aa18.64■□□□□ 0.58
TRIM58-201ENST00000366481 IL1AP01583 271 aa18.64■□□□□ 0.58
TRIM58-201ENST00000366481 JUPP14923 745 aa18.64■□□□□ 0.58
TRIM58-201ENST00000366481 SDHBP21912 280 aa18.64■□□□□ 0.58
TRIM58-201ENST00000366481 RPS25P62851 125 aaKnown RBP18.64■□□□□ 0.58
TRIM58-201ENST00000366481 HSDL2Q6YN16 418 aa18.64■□□□□ 0.58
TRIM58-201ENST00000366481 CHMP1BQ7LBR1 199 aa18.64■□□□□ 0.58
TRIM58-201ENST00000366481 SHFQ7M4L6 423 aa18.64■□□□□ 0.58
TRIM58-201ENST00000366481 NPAS3Q8IXF0 933 aa18.64■□□□□ 0.58
TRIM58-201ENST00000366481 HUS1BQ8NHY5 278 aa18.64■□□□□ 0.58
TRIM58-201ENST00000366481 AIFM2Q9BRQ8 373 aa18.64■□□□□ 0.58
TRIM58-201ENST00000366481 C12orf10Q9HB07 376 aa18.64■□□□□ 0.58
TRIM58-201ENST00000366481 PRR23AA6NEV1 266 aa18.64■□□□□ 0.57
TRIM58-201ENST00000366481 HNRNPCL2B2RXH8 293 aa18.64■□□□□ 0.57
TRIM58-201ENST00000366481 LEFTY2O00292 366 aa18.64■□□□□ 0.57
TRIM58-201ENST00000366481 PTX3P26022 381 aaPredicted RBP18.64■□□□□ 0.57
TRIM58-201ENST00000366481 LYPLAL1Q5VWZ2 237 aa18.64■□□□□ 0.57
TRIM58-201ENST00000366481 B3GLCTQ6Y288 498 aa18.64■□□□□ 0.57
TRIM58-201ENST00000366481 TMED9Q9BVK6 235 aa18.64■□□□□ 0.57
TRIM58-201ENST00000366481 SPATA2Q9UM82 520 aa18.64■□□□□ 0.57
TRIM58-201ENST00000366481 HOXA2O43364 376 aa18.64■□□□□ 0.57
TRIM58-201ENST00000366481 PROM1O43490 865 aa18.64■□□□□ 0.57
TRIM58-201ENST00000366481 IFNW1P05000 195 aa18.64■□□□□ 0.57
TRIM58-201ENST00000366481 ENPP1P22413 925 aa18.64■□□□□ 0.57
TRIM58-201ENST00000366481 XKP51811 444 aa18.64■□□□□ 0.57
TRIM58-201ENST00000366481 RPS26P62854 115 aaKnown RBP18.64■□□□□ 0.57
TRIM58-201ENST00000366481 BTN1A1Q13410 526 aa18.64■□□□□ 0.57
TRIM58-201ENST00000366481 HEPACAMQ14CZ8 416 aa18.64■□□□□ 0.57
TRIM58-201ENST00000366481 ARSIQ5FYB1 569 aa18.64■□□□□ 0.57
TRIM58-201ENST00000366481 TEX261Q6UWH6 196 aa18.64■□□□□ 0.57
TRIM58-201ENST00000366481 DEF8Q6ZN54 512 aa18.64■□□□□ 0.57
TRIM58-201ENST00000366481 HMGN2P46Q86SG4 172 aa18.64■□□□□ 0.57
TRIM58-201ENST00000366481 KIF18BQ86Y91 864 aa18.64■□□□□ 0.57
TRIM58-201ENST00000366481 CHCHD4Q8N4Q1 142 aa18.64■□□□□ 0.57
TRIM58-201ENST00000366481 SIPA1Q96FS4 1042 aa18.64■□□□□ 0.57
TRIM58-201ENST00000366481 SLC35A5Q9BS91 424 aa18.64■□□□□ 0.57
TRIM58-201ENST00000366481 SLC46A2Q9BY10 475 aa18.64■□□□□ 0.57
TRIM58-201ENST00000366481 ACER3Q9NUN7 267 aa18.64■□□□□ 0.57
TRIM58-201ENST00000366481 U3KQ87 197 aa18.64■□□□□ 0.57
TRIM58-201ENST00000366481 C6orf47O95873 294 aa18.63■□□□□ 0.57
TRIM58-201ENST00000366481 C8GP07360 202 aa18.63■□□□□ 0.57
TRIM58-201ENST00000366481 METAP1P53582 386 aa18.63■□□□□ 0.57
TRIM58-201ENST00000366481 PER3P56645 1201 aa18.63■□□□□ 0.57
TRIM58-201ENST00000366481 RGS1Q08116 209 aa18.63■□□□□ 0.57
TRIM58-201ENST00000366481 BHLHB9Q6PI77 547 aa18.63■□□□□ 0.57
TRIM58-201ENST00000366481 L3MBTL4Q8NA19 623 aa18.63■□□□□ 0.57
TRIM58-201ENST00000366481 ZNF740Q8NDX6 193 aa18.63■□□□□ 0.57
TRIM58-201ENST00000366481 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.63■□□□□ 0.57
TRIM58-201ENST00000366481 TCEAL4Q96EI5 215 aa18.63■□□□□ 0.57
TRIM58-201ENST00000366481 KATNB1Q9BVA0 655 aa18.63■□□□□ 0.57
TRIM58-201ENST00000366481 POLR2J3Q9H1A7 115 aaKnown RBP18.63■□□□□ 0.57
TRIM58-201ENST00000366481 SLC28A3Q9HAS3 691 aa18.63■□□□□ 0.57
TRIM58-201ENST00000366481 BEX1Q9HBH7 125 aa18.63■□□□□ 0.57
TRIM58-201ENST00000366481 ZDHHC4Q9NPG8 344 aa18.63■□□□□ 0.57
TRIM58-201ENST00000366481 NDUFB11Q9NX14 153 aa18.63■□□□□ 0.57
TRIM58-201ENST00000366481 HCN1O60741 890 aa18.63■□□□□ 0.57
TRIM58-201ENST00000366481 MSL3P1P0C860 447 aa18.63■□□□□ 0.57
TRIM58-201ENST00000366481 ZNF30P17039 623 aa18.63■□□□□ 0.57
TRIM58-201ENST00000366481 DEFB103AP81534 67 aa18.63■□□□□ 0.57
TRIM58-201ENST00000366481 TLE2Q04725 743 aa18.63■□□□□ 0.57
TRIM58-201ENST00000366481 ZMYND11Q15326 602 aa18.63■□□□□ 0.57
TRIM58-201ENST00000366481 BICRALQ6AI39 1079 aa18.63■□□□□ 0.57
TRIM58-201ENST00000366481 C19orf48Q6RUI8 117 aa18.63■□□□□ 0.57
TRIM58-201ENST00000366481 ADGRD2Q7Z7M1 963 aa18.63■□□□□ 0.57
TRIM58-201ENST00000366481 C9orf62Q8N4C0 152 aa18.63■□□□□ 0.57
TRIM58-201ENST00000366481 NEIL2Q969S2 332 aa18.63■□□□□ 0.57
TRIM58-201ENST00000366481 EIF3KQ9UBQ5 218 aaKnown RBP18.63■□□□□ 0.57
TRIM58-201ENST00000366481 CORO2BQ9UQ03 480 aa18.63■□□□□ 0.57
TRIM58-201ENST00000366481 GSAPA4D1B5 854 aa18.62■□□□□ 0.57
TRIM58-201ENST00000366481 LEFTY1O75610 366 aa18.62■□□□□ 0.57
TRIM58-201ENST00000366481 TP53P04637 393 aaPredicted RBP18.62■□□□□ 0.57
TRIM58-201ENST00000366481 PCGF2P35227 344 aa18.62■□□□□ 0.57
TRIM58-201ENST00000366481 HBA1P69905 142 aa18.62■□□□□ 0.57
TRIM58-201ENST00000366481 CDK6Q00534 326 aa18.62■□□□□ 0.57
TRIM58-201ENST00000366481 ZSWIM7Q19AV6 140 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms