RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 RNASE11Q8TAA1 199 aaKnown RBP13.17□□□□□ -0.3
CTR9-201ENST00000361367 OR1E3Q8WZA6 343 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 RBP7Q96R05 134 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 MKRN2Q9H000 416 aaKnown RBP13.17□□□□□ -0.3
CTR9-201ENST00000361367 GRHPRQ9UBQ7 328 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 SCN4AP35499 1836 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 TRIOBPQ9H2D6 2365 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 A6NCN8 305 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 ZNF99A8MXY4 864 aaPredicted RBP13.16□□□□□ -0.3
CTR9-201ENST00000361367 H0YGG7 62 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 RNASET2O00584 256 aaKnown RBP13.16□□□□□ -0.3
CTR9-201ENST00000361367 LDOC1O95751 146 aaPredicted RBP13.16□□□□□ -0.3
CTR9-201ENST00000361367 ITGB8P26012 769 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 NUP62P37198 522 aaPredicted RBP13.16□□□□□ -0.3
CTR9-201ENST00000361367 GBX2P52951 348 aaPredicted RBP13.16□□□□□ -0.3
CTR9-201ENST00000361367 ARF3P61204 181 aaPredicted RBP13.16□□□□□ -0.3
CTR9-201ENST00000361367 SWT1Q5T5J6 900 aaKnown RBP13.16□□□□□ -0.3
CTR9-201ENST00000361367 ZSCAN1Q8NBB4 408 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 OR51A7Q8NH64 312 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 HSPBAP1Q96EW2 488 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 WDR83Q9BRX9 315 aaKnown RBP13.16□□□□□ -0.3
CTR9-201ENST00000361367 KCNK13Q9HB14 408 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 BRD7Q9NPI1 651 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 SMOXQ9NWM0 555 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 VAPAQ9P0L0 249 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 ZNF451Q9Y4E5 1061 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 AP1M2Q9Y6Q5 423 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 TNS1Q9HBL0 1735 aaKnown RBP13.16□□□□□ -0.3
CTR9-201ENST00000361367 GABRR3A8MPY1 467 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 FAAHO00519 579 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 ASNA1O43681 348 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 SRPX2O60687 465 aaPredicted RBP13.16□□□□□ -0.3
CTR9-201ENST00000361367 ECDO95905 644 aaPredicted RBP13.16□□□□□ -0.3
CTR9-201ENST00000361367 TACSTD2P09758 323 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 UGT2B7P16662 529 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 GGT1P19440 569 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 PGCP20142 388 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 SLC9A3P48764 834 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 ACVR1Q04771 509 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 BLMHQ13867 455 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 GPR18Q14330 331 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 GINS1Q14691 196 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 PIGGQ5H8A4 983 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 SHISA6Q6ZSJ9 500 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 VTCN1Q7Z7D3 282 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 ZNF676Q8N7Q3 588 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 GNPDA2Q8TDQ7 276 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 DIO2Q92813 273 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 MRGPRX1Q96LB2 322 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 SLC6A16Q9GZN6 736 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 MTHFD2LQ9H903 347 aaPredicted RBP13.16□□□□□ -0.3
CTR9-201ENST00000361367 MARCH7Q9H992 704 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 PRDM4Q9UKN5 801 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 A0A0G2JPF8 293 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 TMEM202A6NGA9 273 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 C17orf105B2RV13 164 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 HNRNPCL3B7ZW38 293 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 H0Y8X5 98 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 TNFRSF10CO14798 259 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 LDB3O75112 727 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 HNRNPCL4P0DMR1 293 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 RHCEP18577 417 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 MAPK14Q16539 360 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 TIGD6Q17RP2 521 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 TMEM225Q6GV28 225 aa13.16□□□□□ -0.3
CTR9-201ENST00000361367 PEG10Q86TG7 708 aaKnown RBP13.16□□□□□ -0.3
CTR9-201ENST00000361367 YTHDF1Q9BYJ9 559 aaKnown RBP13.16□□□□□ -0.3
CTR9-201ENST00000361367 POM121BA6NF01 834 aa13.15□□□□□ -0.3
CTR9-201ENST00000361367 H0YIV9 168 aa13.15□□□□□ -0.3
CTR9-201ENST00000361367 LSM1O15116 133 aaKnown RBP13.15□□□□□ -0.3
CTR9-201ENST00000361367 AP1G1O43747 822 aa13.15□□□□□ -0.3
CTR9-201ENST00000361367 PSIP1O75475 530 aaKnown RBP13.15□□□□□ -0.3
CTR9-201ENST00000361367 GLULP15104 373 aa13.15□□□□□ -0.3
CTR9-201ENST00000361367 PER3P56645 1201 aa13.15□□□□□ -0.3
CTR9-201ENST00000361367 KCNAB2Q13303 367 aa13.15□□□□□ -0.3
CTR9-201ENST00000361367 PMS2P3Q13401 168 aa13.15□□□□□ -0.3
CTR9-201ENST00000361367 ZNF423Q2M1K9 1284 aa13.15□□□□□ -0.3
CTR9-201ENST00000361367 EXOC3L2Q2M3D2 409 aa13.15□□□□□ -0.3
CTR9-201ENST00000361367 BTBD16Q32M84 506 aa13.15□□□□□ -0.3
CTR9-201ENST00000361367 SFT2D3Q587I9 215 aa13.15□□□□□ -0.3
CTR9-201ENST00000361367 TMEM196Q5HYL7 178 aa13.15□□□□□ -0.3
CTR9-201ENST00000361367 GPAT4Q86UL3 456 aa13.15□□□□□ -0.3
CTR9-201ENST00000361367 PPP1R3BQ86XI6 285 aa13.15□□□□□ -0.3
CTR9-201ENST00000361367 SYNPOQ8N3V7 929 aa13.15□□□□□ -0.3
CTR9-201ENST00000361367 FBXL20Q96IG2 436 aa13.15□□□□□ -0.3
CTR9-201ENST00000361367 SCN1AP35498 2009 aa13.15□□□□□ -0.3
CTR9-201ENST00000361367 RNF13O43567 381 aa13.15□□□□□ -0.3
CTR9-201ENST00000361367 LCN8Q6JVE9 175 aa13.15□□□□□ -0.3
CTR9-201ENST00000361367 SLCO4C1Q6ZQN7 724 aa13.15□□□□□ -0.3
CTR9-201ENST00000361367 CROCCP3Q8IVE0 287 aa13.15□□□□□ -0.3
CTR9-201ENST00000361367 CLIP4Q8N3C7 705 aa13.15□□□□□ -0.3
CTR9-201ENST00000361367 GOLM1Q8NBJ4 401 aa13.15□□□□□ -0.3
CTR9-201ENST00000361367 PNPLA2Q96AD5 504 aa13.15□□□□□ -0.3
CTR9-201ENST00000361367 COX4I2Q96KJ9 171 aa13.15□□□□□ -0.3
CTR9-201ENST00000361367 ADAD1Q96M93 576 aaKnown RBP13.15□□□□□ -0.3
CTR9-201ENST00000361367 C1QTNF1Q9BXJ1 281 aa13.15□□□□□ -0.3
CTR9-201ENST00000361367 POLDIP3Q9BY77 421 aaKnown RBP13.15□□□□□ -0.3
CTR9-201ENST00000361367 C20orf27Q9GZN8 174 aa13.15□□□□□ -0.3
CTR9-201ENST00000361367 P2RY12Q9H244 342 aa13.15□□□□□ -0.3
CTR9-201ENST00000361367 GAREM1Q9H706 876 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms