RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 MAGIXQ9H6Y5 334 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 TTC24A2A3L6 582 aaPredicted RBP9.28□□□□□ -0.92
CUX1-203ENST00000360264 PORP16435 677 aaPredicted RBP9.28□□□□□ -0.92
CUX1-203ENST00000360264 KLF1Q13351 362 aaPredicted RBP9.28□□□□□ -0.92
CUX1-203ENST00000360264 ZNF689Q96CS4 500 aaPredicted RBP9.28□□□□□ -0.92
CUX1-203ENST00000360264 TXN2Q99757 166 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 MRI1Q9BV20 369 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 FBRSL1Q9HCM7 1045 aaKnown RBP9.28□□□□□ -0.92
CUX1-203ENST00000360264 PCDHGA6Q9Y5G7 932 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 HSPE1-MOB4S4R3N1 261 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 FANCMQ8IYD8 2048 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 OR10Q1Q8NGQ4 319 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 CENPOQ9BU64 300 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 GKN1Q9NS71 199 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 C19orf12Q9NSK7 152 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 ZNF446Q9NWS9 450 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 ABRACLQ9P1F3 81 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 A0A096LPI6 279 aa9.27□□□□□ -0.92
CUX1-203ENST00000360264 TRBV2A0A0J9YWF9 115 aa9.27□□□□□ -0.92
CUX1-203ENST00000360264 C9JVG2 144 aa9.27□□□□□ -0.92
CUX1-203ENST00000360264 CCL22O00626 93 aa9.27□□□□□ -0.92
CUX1-203ENST00000360264 LEFTY1O75610 366 aa9.27□□□□□ -0.92
CUX1-203ENST00000360264 BMP4P12644 408 aa9.27□□□□□ -0.92
CUX1-203ENST00000360264 IFI30P13284 250 aa9.27□□□□□ -0.92
CUX1-203ENST00000360264 JUNDP17535 347 aa9.27□□□□□ -0.92
CUX1-203ENST00000360264 MCCD1P59942 119 aaPredicted RBP9.27□□□□□ -0.92
CUX1-203ENST00000360264 RSU1Q15404 277 aa9.27□□□□□ -0.92
CUX1-203ENST00000360264 RNF220Q5VTB9 566 aa9.27□□□□□ -0.92
CUX1-203ENST00000360264 C1orf94Q6P1W5 598 aa9.27□□□□□ -0.92
CUX1-203ENST00000360264 ZNF431Q8TF32 576 aaPredicted RBP9.27□□□□□ -0.92
CUX1-203ENST00000360264 FAM46BQ96A09 425 aa9.27□□□□□ -0.92
CUX1-203ENST00000360264 MALSU1Q96EH3 234 aa9.27□□□□□ -0.92
CUX1-203ENST00000360264 STUB1Q9UNE7 303 aa9.27□□□□□ -0.92
CUX1-203ENST00000360264 ZNF541Q9H0D2 1346 aa9.27□□□□□ -0.92
CUX1-203ENST00000360264 TOR1AO14656 332 aa9.27□□□□□ -0.92
CUX1-203ENST00000360264 SCO2O43819 266 aa9.27□□□□□ -0.92
CUX1-203ENST00000360264 DLX3O60479 287 aa9.27□□□□□ -0.92
CUX1-203ENST00000360264 PRAMEF2O60811 474 aa9.27□□□□□ -0.92
CUX1-203ENST00000360264 EEDO75530 441 aaKnown RBP9.27□□□□□ -0.92
CUX1-203ENST00000360264 RAB41Q5JT25 222 aa9.27□□□□□ -0.92
CUX1-203ENST00000360264 NKAPLQ5M9Q1 402 aa9.27□□□□□ -0.92
CUX1-203ENST00000360264 SPATC1Q76KD6 591 aa9.27□□□□□ -0.92
CUX1-203ENST00000360264 C10orf82Q8WW14 230 aa9.27□□□□□ -0.92
CUX1-203ENST00000360264 PGAP3Q96FM1 320 aaPredicted RBP9.27□□□□□ -0.92
CUX1-203ENST00000360264 SACM1LQ9NTJ5 587 aa9.27□□□□□ -0.92
CUX1-203ENST00000360264 TMEM98Q9Y2Y6 226 aa9.27□□□□□ -0.92
CUX1-203ENST00000360264 DOCK8Q8NF50 2099 aa9.27□□□□□ -0.92
CUX1-203ENST00000360264 TCRBV7S2A1N4TA0A589 114 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 FASLGP48023 281 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 FUT2Q10981 343 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 FGL2Q14314 439 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 PTCHD3Q3KNS1 767 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 OR5H2Q8NGV7 314 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 MINDY3Q9H8M7 445 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 A8MT66 165 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 H7BY64 318 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 MPPED1O15442 326 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 NDUFV2P19404 249 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 CHMP24386 653 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 PRAP1Q96NZ9 151 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 MYADMQ96S97 322 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 BARD1Q99728 777 aaKnown RBP9.27□□□□□ -0.93
CUX1-203ENST00000360264 MEAF6Q9HAF1 191 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 XPNPEP2O43895 674 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 DAP3P51398 398 aaKnown RBP9.27□□□□□ -0.93
CUX1-203ENST00000360264 NKX3-2P78367 333 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 BNIP3Q12983 259 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 CNPY1Q3B7I2 92 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 BEST3Q8N1M1 668 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 ESAMQ96AP7 390 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 OR10A5Q9H207 317 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 OR10A2Q9H208 303 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 FZD3Q9NPG1 666 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 CTPS2Q9NRF8 586 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 MRC1P22897 1456 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 OR56B2PQ8NGI1 322 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 TEX264Q9Y6I9 313 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 DOCK3Q8IZD9 2030 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 FUOMA2VDF0 154 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 OR6C74A6NCV1 312 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 GGT3PA6NGU5 568 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 ARHGEF15O94989 841 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 COQ5Q5HYK3 327 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 OR4F3Q6IEY1 312 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 OR51D1Q8NGF3 324 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 MSI2Q96DH6 328 aaKnown RBP9.27□□□□□ -0.93
CUX1-203ENST00000360264 GRXCR1A8MXD5 290 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 FOXE1O00358 373 aaPredicted RBP9.27□□□□□ -0.93
CUX1-203ENST00000360264 TMEM198Q66K66 360 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 DNAJC22Q8N4W6 341 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 OR9A2Q8NGT5 310 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 LRCH3Q96II8 777 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 DEFB126Q9BYW3 111 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 WDR6Q9NNW5 1121 aaKnown RBP9.27□□□□□ -0.93
CUX1-203ENST00000360264 UCKL1Q9NWZ5 548 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 CCL5P13501 91 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 ZNF14P17017 642 aaPredicted RBP9.27□□□□□ -0.93
CUX1-203ENST00000360264 TUBG1P23258 451 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 GDF10P55107 478 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 UBE2NP61088 152 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms