RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 CCDC90BQ9GZT6 254 aa17.27■□□□□ 0.35
PDLIM7-203ENST00000359895 C6orf106Q9H6K1 298 aaPredicted RBP17.27■□□□□ 0.35
PDLIM7-203ENST00000359895 SYNPO2LQ9H987 977 aa17.27■□□□□ 0.35
PDLIM7-203ENST00000359895 TMCC3Q9ULS5 477 aa17.27■□□□□ 0.35
PDLIM7-203ENST00000359895 PCDHGA6Q9Y5G7 932 aa17.27■□□□□ 0.35
PDLIM7-203ENST00000359895 KLK4Q9Y5K2 254 aa17.27■□□□□ 0.35
PDLIM7-203ENST00000359895 GSAPA4D1B5 854 aa17.26■□□□□ 0.35
PDLIM7-203ENST00000359895 OR6C74A6NCV1 312 aa17.26■□□□□ 0.35
PDLIM7-203ENST00000359895 C2orf74A8MZ97 194 aa17.26■□□□□ 0.35
PDLIM7-203ENST00000359895 NDUFS2O75306 463 aa17.26■□□□□ 0.35
PDLIM7-203ENST00000359895 OXSR1O95747 527 aaPredicted RBP17.26■□□□□ 0.35
PDLIM7-203ENST00000359895 SMIM10L1P0DMW3 83 aa17.26■□□□□ 0.35
PDLIM7-203ENST00000359895 MAGP20916 626 aa17.26■□□□□ 0.35
PDLIM7-203ENST00000359895 PCMT1P22061 227 aa17.26■□□□□ 0.35
PDLIM7-203ENST00000359895 EPHA2P29317 976 aa17.26■□□□□ 0.35
PDLIM7-203ENST00000359895 TFF2Q03403 129 aa17.26■□□□□ 0.35
PDLIM7-203ENST00000359895 MVKQ03426 396 aa17.26■□□□□ 0.35
PDLIM7-203ENST00000359895 SMAD4Q13485 552 aaKnown RBP17.26■□□□□ 0.35
PDLIM7-203ENST00000359895 NPTX1Q15818 432 aa17.26■□□□□ 0.35
PDLIM7-203ENST00000359895 SYPL1Q16563 259 aa17.26■□□□□ 0.35
PDLIM7-203ENST00000359895 KCT2Q8NC54 265 aa17.26■□□□□ 0.35
PDLIM7-203ENST00000359895 FAM174AQ8TBP5 190 aa17.26■□□□□ 0.35
PDLIM7-203ENST00000359895 SMIM10Q96HG1 83 aa17.26■□□□□ 0.35
PDLIM7-203ENST00000359895 COL21A1Q96P44 957 aa17.26■□□□□ 0.35
PDLIM7-203ENST00000359895 OR2A5Q96R48 311 aa17.26■□□□□ 0.35
PDLIM7-203ENST00000359895 BTBD2Q9BX70 525 aa17.26■□□□□ 0.35
PDLIM7-203ENST00000359895 LIN28AQ9H9Z2 209 aaKnown RBP17.26■□□□□ 0.35
PDLIM7-203ENST00000359895 SPTBN5Q9NRC6 3674 aaKnown RBP17.26■□□□□ 0.35
PDLIM7-203ENST00000359895 A0A0G2JPF8 293 aa17.25■□□□□ 0.35
PDLIM7-203ENST00000359895 ZNF99A8MXY4 864 aaPredicted RBP17.25■□□□□ 0.35
PDLIM7-203ENST00000359895 HNRNPCL2B2RXH8 293 aa17.25■□□□□ 0.35
PDLIM7-203ENST00000359895 HNRNPCL3B7ZW38 293 aa17.25■□□□□ 0.35
PDLIM7-203ENST00000359895 PCDH17O14917 1159 aa17.25■□□□□ 0.35
PDLIM7-203ENST00000359895 AXIN1O15169 862 aa17.25■□□□□ 0.35
PDLIM7-203ENST00000359895 RGS10O43665 173 aa17.25■□□□□ 0.35
PDLIM7-203ENST00000359895 NARSO43776 548 aaKnown RBP17.25■□□□□ 0.35
PDLIM7-203ENST00000359895 HNRNPCL4P0DMR1 293 aa17.25■□□□□ 0.35
PDLIM7-203ENST00000359895 POLR2CP19387 275 aaPredicted RBP17.25■□□□□ 0.35
PDLIM7-203ENST00000359895 CBLP22681 906 aa17.25■□□□□ 0.35
PDLIM7-203ENST00000359895 TNFRSF17Q02223 184 aa17.25■□□□□ 0.35
PDLIM7-203ENST00000359895 GANABQ14697 944 aaKnown RBP17.25■□□□□ 0.35
PDLIM7-203ENST00000359895 DHRS4L2Q6PKH6 230 aa17.25■□□□□ 0.35
PDLIM7-203ENST00000359895 TRIM73Q86UV7 250 aa17.25■□□□□ 0.35
PDLIM7-203ENST00000359895 CCDC71Q8IV32 467 aaPredicted RBP17.25■□□□□ 0.35
PDLIM7-203ENST00000359895 P3H2Q8IVL5 708 aa17.25■□□□□ 0.35
PDLIM7-203ENST00000359895 ENTHD1Q8IYW4 607 aa17.25■□□□□ 0.35
PDLIM7-203ENST00000359895 ZNF540Q8NDQ6 660 aa17.25■□□□□ 0.35
PDLIM7-203ENST00000359895 DHRS1Q96LJ7 313 aa17.25■□□□□ 0.35
PDLIM7-203ENST00000359895 ZNF681Q96N22 645 aa17.25■□□□□ 0.35
PDLIM7-203ENST00000359895 SH3GL3Q99963 347 aa17.25■□□□□ 0.35
PDLIM7-203ENST00000359895 SLC2A4RGQ9NR83 387 aa17.25■□□□□ 0.35
PDLIM7-203ENST00000359895 DNAAF2Q9NVR5 837 aaKnown RBP17.25■□□□□ 0.35
PDLIM7-203ENST00000359895 RLIMQ9NVW2 624 aa17.25■□□□□ 0.35
PDLIM7-203ENST00000359895 ERVK-18Q9QC07 812 aa17.25■□□□□ 0.35
PDLIM7-203ENST00000359895 CPNE7Q9UBL6 633 aa17.25■□□□□ 0.35
PDLIM7-203ENST00000359895 NDRG2Q9UN36 371 aaKnown RBP17.25■□□□□ 0.35
PDLIM7-203ENST00000359895 SCN3AQ9NY46 2000 aa17.25■□□□□ 0.35
PDLIM7-203ENST00000359895 GOLGA4Q13439 2230 aaKnown RBP17.25■□□□□ 0.35
PDLIM7-203ENST00000359895 WASHC1A8K0Z3 465 aa17.24■□□□□ 0.35
PDLIM7-203ENST00000359895 ASNA1O43681 348 aa17.24■□□□□ 0.35
PDLIM7-203ENST00000359895 ATE1O95260 518 aa17.24■□□□□ 0.35
PDLIM7-203ENST00000359895 HMGN2P05204 90 aaKnown RBP17.24■□□□□ 0.35
PDLIM7-203ENST00000359895 CCNA2P20248 432 aa17.24■□□□□ 0.35
PDLIM7-203ENST00000359895 FEN1P39748 380 aaKnown RBP17.24■□□□□ 0.35
PDLIM7-203ENST00000359895 PRKAG1P54619 331 aa17.24■□□□□ 0.35
PDLIM7-203ENST00000359895 LIM2P55344 173 aa17.24■□□□□ 0.35
PDLIM7-203ENST00000359895 UBE2IP63279 158 aaKnown RBP17.24■□□□□ 0.35
PDLIM7-203ENST00000359895 PIGFQ07326 219 aa17.24■□□□□ 0.35
PDLIM7-203ENST00000359895 GPR19Q15760 415 aa17.24■□□□□ 0.35
PDLIM7-203ENST00000359895 MLIPQ5VWP3 458 aa17.24■□□□□ 0.35
PDLIM7-203ENST00000359895 FCRL6Q6DN72 434 aa17.24■□□□□ 0.35
PDLIM7-203ENST00000359895 SLC22A18ASQ8N1D0 253 aa17.24■□□□□ 0.35
PDLIM7-203ENST00000359895 ZNF655Q8N720 491 aaPredicted RBP17.24■□□□□ 0.35
PDLIM7-203ENST00000359895 FLCNQ8NFG4 579 aa17.24■□□□□ 0.35
PDLIM7-203ENST00000359895 OR5D16Q8NGK9 328 aa17.24■□□□□ 0.35
PDLIM7-203ENST00000359895 OR10G6Q8NH81 332 aa17.24■□□□□ 0.35
PDLIM7-203ENST00000359895 RSC1A1Q92681 617 aa17.24■□□□□ 0.35
PDLIM7-203ENST00000359895 TOE1Q96GM8 510 aaKnown RBP17.24■□□□□ 0.35
PDLIM7-203ENST00000359895 NIPSNAP1Q9BPW8 284 aa17.24■□□□□ 0.35
PDLIM7-203ENST00000359895 GPN2Q9H9Y4 310 aaPredicted RBP17.24■□□□□ 0.35
PDLIM7-203ENST00000359895 PLCXD1Q9NUJ7 323 aa17.24■□□□□ 0.35
PDLIM7-203ENST00000359895 MS4A12Q9NXJ0 267 aa17.24■□□□□ 0.35
PDLIM7-203ENST00000359895 CALML5Q9NZT1 146 aa17.24■□□□□ 0.35
PDLIM7-203ENST00000359895 PILRAQ9UKJ1 303 aa17.24■□□□□ 0.35
PDLIM7-203ENST00000359895 CYP8B1Q9UNU6 501 aa17.24■□□□□ 0.35
PDLIM7-203ENST00000359895 RNF6Q9Y252 685 aa17.24■□□□□ 0.35
PDLIM7-203ENST00000359895 PRAMEF27A3QJZ7 478 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 MBTPS2O43462 519 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 B3GALT2O43825 422 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 PCDHGA12O60330 932 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 WBP4O75554 376 aaKnown RBP17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 H1F0P07305 194 aaKnown RBP17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 SRFP11831 508 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 CPN2P22792 545 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 TLX1P31314 330 aaPredicted RBP17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 KRT20P35900 424 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 EMX1Q04741 257 aaPredicted RBP17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 LASP1Q14847 261 aaKnown RBP17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 CCDC85BQ15834 202 aaPredicted RBP17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 LAIR1Q6GTX8 287 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms