RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 GRIA1P42261 906 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 RGS6P49758 472 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 SF3B4Q15427 424 aaKnown RBP eCLIP12.87□□□□□ -0.356e-10■■■■■ 44.5
LMBR1-201ENST00000353442 SF3A2Q15428 464 aaKnown RBP12.87□□□□□ -0.35
LMBR1-201ENST00000353442 LRRC18Q8N456 261 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 STK35Q8TDR2 534 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 TMEM74Q96NL1 305 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 F2RL3Q96RI0 385 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 RAB21Q9UL25 225 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 WIF1Q9Y5W5 379 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 TGM5O43548 720 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 RNH1P13489 461 aaKnown RBP12.87□□□□□ -0.35
LMBR1-201ENST00000353442 CLDN2P57739 230 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 LINC00696Q6ZRV3 163 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 TPRA1Q86W33 373 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 LSM5Q9Y4Y9 91 aaKnown RBP12.87□□□□□ -0.35
LMBR1-201ENST00000353442 CHD1O14646 1710 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 GABRDO14764 452 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 TMEFF1Q8IYR6 380 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 SNIP1Q8TAD8 396 aaKnown RBP12.87□□□□□ -0.35
LMBR1-201ENST00000353442 PPP1R35Q8TAP8 253 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 TMEM80Q96HE8 168 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 VRK1Q99986 396 aaPredicted RBP12.87□□□□□ -0.35
LMBR1-201ENST00000353442 RXFP3Q9NSD7 469 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 CMAHPQ9Y471 501 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 AGAP5A6NIR3 686 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 NPHS1O60500 1241 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 IL3P08700 152 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 HAPLN1P10915 354 aaPredicted RBP12.87□□□□□ -0.35
LMBR1-201ENST00000353442 TNFRSF8P28908 595 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 FRKP42685 505 aaPredicted RBP12.87□□□□□ -0.35
LMBR1-201ENST00000353442 CATSPEREQ5SY80 951 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 NPAS3Q8IXF0 933 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 PSD4Q8NDX1 1056 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 ROPN1LQ96C74 230 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 ULBP3Q9BZM4 244 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 ZNF160Q9HCG1 818 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 PIGVQ9NUD9 493 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 RLIMQ9NVW2 624 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 CD79BP40259 229 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 TLE3Q04726 772 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 SENP5Q96HI0 755 aaPredicted RBP12.87□□□□□ -0.35
LMBR1-201ENST00000353442 H0Y8G0 127 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 GRIA2P42262 883 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 TMBIM6P55061 237 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 LRRC55Q6ZSA7 311 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 IRF2BP2Q7Z5L9 587 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 STON2Q8WXE9 905 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 RHBDD3Q9Y3P4 386 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 REREQ9P2R6 1566 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 FLRT2O43155 660 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 CRTAPO75718 401 aaPredicted RBP12.86□□□□□ -0.35
LMBR1-201ENST00000353442 G6PDP11413 515 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 HOXB6P17509 224 aaKnown RBP12.86□□□□□ -0.35
LMBR1-201ENST00000353442 LGALS4P56470 323 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 HNF4GQ14541 408 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 HERC3Q15034 1050 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 BBS1Q8NFJ9 593 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 DOHHQ9BU89 302 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 SCML2Q9UQR0 700 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 ST14Q9Y5Y6 855 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 BTBD17A6NE02 478 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 IFNA1P01562 189 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 CXCL12P48061 93 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 RRAS2P62070 204 aaPredicted RBP12.86□□□□□ -0.35
LMBR1-201ENST00000353442 OR8B8Q15620 311 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 SLC36A3Q495N2 470 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 TRIM61Q5EBN2 209 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 RNF220Q5VTB9 566 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 MRPL41Q8IXM3 137 aaKnown RBP12.86□□□□□ -0.35
LMBR1-201ENST00000353442 C17orf50Q8WW18 174 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 LRFN1Q9P244 771 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 ZNF14P17017 642 aaPredicted RBP12.86□□□□□ -0.35
LMBR1-201ENST00000353442 HNRNPA0Q13151 305 aaKnown RBP12.86□□□□□ -0.35
LMBR1-201ENST00000353442 GRB7Q14451 532 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 TRAM2Q15035 370 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 DPY19L1Q2PZI1 675 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 HSD17B12Q53GQ0 312 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 GRAMD2AQ8IUY3 354 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 ARL14Q8N4G2 192 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 TMBIM1Q969X1 311 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 NLE1Q9NVX2 485 aaPredicted RBP12.86□□□□□ -0.35
LMBR1-201ENST00000353442 ZNF821O75541 412 aaPredicted RBP12.86□□□□□ -0.35
LMBR1-201ENST00000353442 CD9P21926 228 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 KCNC1P48547 511 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 OR7A5Q15622 319 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 ZNF695Q8IW36 515 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 FBXW5Q969U6 566 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 SECISBP2Q96T21 854 aaKnown RBP12.86□□□□□ -0.35
LMBR1-201ENST00000353442 CXorf21Q9HAI6 301 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 TRBV11-1A0A0K0K1C0 115 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 CREB1P16220 341 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 LRRN1Q6UXK5 716 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 GPR155Q7Z3F1 870 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 IGSF21Q96ID5 467 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 GPN2Q9H9Y4 310 aaPredicted RBP12.86□□□□□ -0.35
LMBR1-201ENST00000353442 KLHL9Q9P2J3 617 aa12.86□□□□□ -0.35
LMBR1-201ENST00000353442 TET3O43151 1660 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 CYB5BO43169 146 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms