RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 PAGE3Q5JUK9 113 aa11.57□□□□□ -0.56
SMAD9-201ENST00000350148 CXXC5Q7LFL8 322 aaKnown RBP11.57□□□□□ -0.56
SMAD9-201ENST00000350148 GALNT12Q8IXK2 581 aa11.57□□□□□ -0.56
SMAD9-201ENST00000350148 GATA6Q92908 595 aa11.57□□□□□ -0.56
SMAD9-201ENST00000350148 CHFRQ96EP1 664 aa11.57□□□□□ -0.56
SMAD9-201ENST00000350148 MMABQ96EY8 250 aaPredicted RBP11.57□□□□□ -0.56
SMAD9-201ENST00000350148 RASSF1Q9NS23 344 aa11.57□□□□□ -0.56
SMAD9-201ENST00000350148 SPIN1Q9Y657 262 aaPredicted RBP11.57□□□□□ -0.56
SMAD9-201ENST00000350148 RLFQ13129 1914 aa11.57□□□□□ -0.56
SMAD9-201ENST00000350148 TCRBV3S1A0A5B6 114 aa11.57□□□□□ -0.56
SMAD9-201ENST00000350148 ZNF99A8MXY4 864 aaPredicted RBP11.57□□□□□ -0.56
SMAD9-201ENST00000350148 SRPX2O60687 465 aaPredicted RBP11.57□□□□□ -0.56
SMAD9-201ENST00000350148 TRIM3O75382 744 aaPredicted RBP11.57□□□□□ -0.56
SMAD9-201ENST00000350148 ACADLP28330 430 aa11.57□□□□□ -0.56
SMAD9-201ENST00000350148 YAP1P46937 504 aaKnown RBP11.57□□□□□ -0.56
SMAD9-201ENST00000350148 C1orf61Q13536 156 aa11.57□□□□□ -0.56
SMAD9-201ENST00000350148 MED22Q15528 200 aa11.57□□□□□ -0.56
SMAD9-201ENST00000350148 SMYD1Q8NB12 490 aa11.57□□□□□ -0.56
SMAD9-201ENST00000350148 COPS4Q9BT78 406 aa11.57□□□□□ -0.56
SMAD9-201ENST00000350148 TPSD1Q9BZJ3 242 aa11.57□□□□□ -0.56
SMAD9-201ENST00000350148 TRIM2Q9C040 744 aa11.57□□□□□ -0.56
SMAD9-201ENST00000350148 J3QRK9 145 aa11.56□□□□□ -0.56
SMAD9-201ENST00000350148 DBIP07108 87 aaKnown RBP11.56□□□□□ -0.56
SMAD9-201ENST00000350148 ALDOCP09972 364 aaKnown RBP11.56□□□□□ -0.56
SMAD9-201ENST00000350148 PSMA1P25786 263 aaKnown RBP11.56□□□□□ -0.56
SMAD9-201ENST00000350148 SLC6A12P48065 614 aa11.56□□□□□ -0.56
SMAD9-201ENST00000350148 TAF13Q15543 124 aa11.56□□□□□ -0.56
SMAD9-201ENST00000350148 NPTX1Q15818 432 aa11.56□□□□□ -0.56
SMAD9-201ENST00000350148 OSTF1Q92882 214 aa11.56□□□□□ -0.56
SMAD9-201ENST00000350148 YIPF4Q9BSR8 244 aa11.56□□□□□ -0.56
SMAD9-201ENST00000350148 IL21RQ9HBE5 538 aa11.56□□□□□ -0.56
SMAD9-201ENST00000350148 TOR4AQ9NXH8 423 aa11.56□□□□□ -0.56
SMAD9-201ENST00000350148 NEU3Q9UQ49 428 aa11.56□□□□□ -0.56
SMAD9-201ENST00000350148 MED31Q9Y3C7 131 aa11.56□□□□□ -0.56
SMAD9-201ENST00000350148 TFECO14948 347 aaPredicted RBP11.56□□□□□ -0.56
SMAD9-201ENST00000350148 OPN1SWP03999 348 aa11.56□□□□□ -0.56
SMAD9-201ENST00000350148 RFLNAQ6ZTI6 216 aa11.56□□□□□ -0.56
SMAD9-201ENST00000350148 OR8K5Q8NH50 307 aa11.56□□□□□ -0.56
SMAD9-201ENST00000350148 MS4A4EQ96PG1 132 aa11.56□□□□□ -0.56
SMAD9-201ENST00000350148 LGR4Q9BXB1 951 aa11.56□□□□□ -0.56
SMAD9-201ENST00000350148 C1QTNF2Q9BXJ5 285 aa11.56□□□□□ -0.56
SMAD9-201ENST00000350148 TARM1B6A8C7 271 aa11.56□□□□□ -0.56
SMAD9-201ENST00000350148 PLRG1O43660 514 aaKnown RBP11.56□□□□□ -0.56
SMAD9-201ENST00000350148 B4GALT2O60909 372 aa11.56□□□□□ -0.56
SMAD9-201ENST00000350148 MSR1P21757 451 aa11.56□□□□□ -0.56
SMAD9-201ENST00000350148 PKLRP30613 574 aa11.56□□□□□ -0.56
SMAD9-201ENST00000350148 ENTPD1P49961 510 aa11.56□□□□□ -0.56
SMAD9-201ENST00000350148 HYAL1Q12794 435 aa11.56□□□□□ -0.56
SMAD9-201ENST00000350148 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.56□□□□□ -0.56
SMAD9-201ENST00000350148 PHF19Q5T6S3 580 aa11.56□□□□□ -0.56
SMAD9-201ENST00000350148 LYSMD4Q5XG99 296 aa11.56□□□□□ -0.56
SMAD9-201ENST00000350148 RNF165Q6ZSG1 346 aa11.56□□□□□ -0.56
SMAD9-201ENST00000350148 CARM1Q86X55 608 aa11.56□□□□□ -0.56
SMAD9-201ENST00000350148 TAAR2Q9P1P5 351 aa11.56□□□□□ -0.56
SMAD9-201ENST00000350148 OR2B3O76000 313 aa11.56□□□□□ -0.56
SMAD9-201ENST00000350148 OR12D1P0DN82 309 aa11.56□□□□□ -0.56
SMAD9-201ENST00000350148 NR2C1P13056 603 aa11.56□□□□□ -0.56
SMAD9-201ENST00000350148 NAT1P18440 290 aa11.56□□□□□ -0.56
SMAD9-201ENST00000350148 ADPRHP54922 357 aa11.56□□□□□ -0.56
SMAD9-201ENST00000350148 FRS2Q8WU20 508 aa11.56□□□□□ -0.56
SMAD9-201ENST00000350148 CXorf21Q9HAI6 301 aa11.56□□□□□ -0.56
SMAD9-201ENST00000350148 TMEM9Q9P0T7 183 aa11.56□□□□□ -0.56
SMAD9-201ENST00000350148 SRPK3Q9UPE1 567 aa11.56□□□□□ -0.56
SMAD9-201ENST00000350148 IGLV3-16A0A075B6K0 115 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 TMX2-CTNND1H3BSU7 103 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 TPPPO94811 219 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 CD63P08962 238 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 CLDN2P57739 230 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 TLR1Q15399 786 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 ZBED5Q49AG3 693 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 KCTD8Q6ZWB6 473 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 NUP54Q7Z3B4 507 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 MAVSQ7Z434 540 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 SPAG16Q8N0X2 631 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 FAR1Q8WVX9 515 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 TGM7Q96PF1 710 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 HHIPQ96QV1 700 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 CD180Q99467 661 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 MTHFD2LQ9H903 347 aaPredicted RBP11.55□□□□□ -0.56
SMAD9-201ENST00000350148 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.55□□□□□ -0.56
SMAD9-201ENST00000350148 CASC3O15234 703 aaKnown RBP11.55□□□□□ -0.56
SMAD9-201ENST00000350148 TLX3O43711 291 aaPredicted RBP11.55□□□□□ -0.56
SMAD9-201ENST00000350148 C8orf89P0DMQ9 161 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 TFPIP10646 304 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 OPRD1P41143 372 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 SYT16Q17RD7 645 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 AHSA2Q719I0 299 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 DEFB119Q8N690 84 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 OR10H5Q8NGA6 315 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 GTF2H4Q92759 462 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 C5orf34Q96MH7 638 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 KAT8Q9H7Z6 458 aaKnown RBP11.55□□□□□ -0.56
SMAD9-201ENST00000350148 LRRC37A2A6NM11 1700 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 LOC100506127A0A0U1RQW1 187 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 PPP6CO00743 305 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 MRPS14O60783 128 aaKnown RBP11.55□□□□□ -0.56
SMAD9-201ENST00000350148 CD27P26842 260 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 PFN3P60673 137 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 GANABQ14697 944 aaKnown RBP11.55□□□□□ -0.56
SMAD9-201ENST00000350148 PRPF38BQ5VTL8 546 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms