RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 TMX2-CTNND1H3BSU7 103 aa6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 M0R129 80 aa6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 FRS3O43559 492 aa6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 FCMRO60667 390 aa6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 ZNF217O75362 1048 aa6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 CDC123O75794 336 aaPredicted RBP6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 ZIC2O95409 532 aaPredicted RBP6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 PDGFBP01127 241 aaPredicted RBP6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 CSF2P04141 144 aa6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 FPR1P21462 350 aa6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 EEF1B2P24534 225 aaKnown RBP6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 CD27P26842 260 aa6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 PCSK6P29122 969 aa6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 FMO3P31513 532 aa6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 XKP51811 444 aa6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 STARD6P59095 220 aa6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 TRA2BP62995 288 aaKnown RBP6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 RGS1Q08116 209 aa6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 RBBP4Q09028 425 aa6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 ERV3-1Q14264 604 aa6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 EXOC3L2Q2M3D2 409 aa6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 IFI44LQ53G44 452 aa6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 TRMT12Q53H54 448 aaKnown RBP6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 CCDC80Q76M96 950 aa6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 THAP5Q7Z6K1 395 aa6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 SLC16A11Q8NCK7 471 aa6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 PIK3C3Q8NEB9 887 aa6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 C1orf216Q8TAB5 229 aa6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 GAL3ST3Q96A11 431 aa6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 ELP4Q96EB1 424 aa6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 SPATA9Q9BWV2 254 aa6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 RBM38Q9H0Z9 239 aaKnown RBP6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 ING2Q9H160 280 aa6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 ACER3Q9NUN7 267 aa6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 PAK1IP1Q9NWT1 392 aaPredicted RBP6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 EHD3Q9NZN3 535 aa6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 DAPP1Q9UN19 280 aa6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 WBP11Q9Y2W2 641 aaKnown RBP6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 NAALAD2Q9Y3Q0 740 aa6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 ASPMQ8IZT6 3477 aa6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 PI4KAP42356 2102 aa6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 TMEM265A0A087WTH1 108 aa6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 KIR2DS5A0A0G2JLQ3 304 aa6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 A0A0G2JNG1 304 aa6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 CLDN24A6NM45 220 aa6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 C5orf58C9J3I9 102 aa6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 KIR2DS3K7RE56 304 aa6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 M0R3H8 397 aa6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 TNFRSF11BO00300 401 aa6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 KDM1AO60341 852 aa6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 HTR1AP08908 422 aa6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 NR2F6P10588 404 aa6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 NR2F1P10589 423 aa6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 ALOX12P18054 663 aa6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 CSNK2A2P19784 350 aaPredicted RBP6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 CD247P20963 164 aa6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 CPN2P22792 545 aa6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 ALDH4A1P30038 563 aa6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 GSTT1P30711 240 aa6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 NTSP30990 170 aa6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 PPM1FP49593 454 aaPredicted RBP6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 MAPK10P53779 464 aa6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 GFERP55789 205 aa6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 SPIBQ01892 262 aa6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 BNIP3Q12983 259 aa6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 PMS2P3Q13401 168 aa6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 KIR2DS5Q14953 304 aa6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 NEDD8Q15843 81 aa6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 TCTN3Q6NUS6 607 aa6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 MEX3DQ86XN8 651 aaKnown RBP6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 TBC1D19Q8N5T2 526 aa6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 METTL27Q8N6F8 245 aaPredicted RBP6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 AMER2Q8N7J2 671 aa6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 CHDHQ8NE62 594 aaPredicted RBP6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 OR9A4Q8NGU2 314 aa6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 C3orf18Q9UK00 162 aa6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 THADAQ6YHU6 1953 aa6.96□□□□□ -1.3
SRFBP1-201ENST00000339397 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 TRBV4-1A0A0J9YWV2 114 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 A0A0J9YY10 115 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 TRIM64A6NGJ6 449 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 BCKDKO14874 412 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 FGF17O60258 216 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 MAN1A2O60476 641 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 UBXN7O94888 489 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 HPRP00739 348 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 IGFBP1P08833 259 aaPredicted RBP6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 CRHBPP24387 322 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 MPIP34949 423 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 XCR1P46094 333 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 NR1H2P55055 460 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 SHC2P98077 582 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 HOXC5Q00444 222 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 ZP2Q05996 745 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 PIN1Q13526 163 aaPredicted RBP6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 KCNAB1Q14722 419 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 MLC1Q15049 377 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 SEC23BQ15437 767 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 SYT16Q17RD7 645 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 PRAMEF17Q5VTA0 474 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms