RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 FAIM2Q9BWQ8 316 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 ACPTQ9BZG2 426 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 GSX2Q9BZM3 304 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 REV1Q9UBZ9 1251 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 ENPP4Q9Y6X5 453 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 A3GALT2U3KPV4 340 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 RGS13O14921 159 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 OR6A2O95222 327 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 RASGRP1O95267 797 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 EPOP01588 193 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 IFNA6P05013 189 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 C8GP07360 202 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 KIR2DL3P43628 341 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 AFF1P51825 1210 aaKnown RBP12.64□□□□□ -0.39
COL2A1-201ENST00000337299 PSPHP78330 225 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 SERINC3Q13530 473 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 GNA13Q14344 377 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 HYAL4Q2M3T9 481 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 SERPINA13PQ6UXR4 307 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 THOC6Q86W42 341 aaKnown RBP12.64□□□□□ -0.39
COL2A1-201ENST00000337299 ARMC10Q8N2F6 343 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 OTUB2Q96DC9 234 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 E2F3O00716 465 aa12.63□□□□□ -0.39
COL2A1-201ENST00000337299 PITPNBP48739 271 aa12.63□□□□□ -0.39
COL2A1-201ENST00000337299 ZNF33BQ06732 778 aa12.63□□□□□ -0.39
COL2A1-201ENST00000337299 MGAT3Q09327 533 aa12.63□□□□□ -0.39
COL2A1-201ENST00000337299 CBLL1Q75N03 491 aa12.63□□□□□ -0.39
COL2A1-201ENST00000337299 GALNTL5Q7Z4T8 443 aa12.63□□□□□ -0.39
COL2A1-201ENST00000337299 OR4K5Q8NGD3 323 aa12.63□□□□□ -0.39
COL2A1-201ENST00000337299 ANGPTL6Q8NI99 470 aa12.63□□□□□ -0.39
COL2A1-201ENST00000337299 NDUFAF4Q9P032 175 aa12.63□□□□□ -0.39
COL2A1-201ENST00000337299 STOX2Q9P2F5 926 aaPredicted RBP12.63□□□□□ -0.39
COL2A1-201ENST00000337299 RASD1Q9Y272 281 aa12.63□□□□□ -0.39
COL2A1-201ENST00000337299 RAB19A4D1S5 217 aa12.63□□□□□ -0.39
COL2A1-201ENST00000337299 STK25O00506 426 aa12.63□□□□□ -0.39
COL2A1-201ENST00000337299 HOXA2O43364 376 aa12.63□□□□□ -0.39
COL2A1-201ENST00000337299 IL1AP01583 271 aa12.63□□□□□ -0.39
COL2A1-201ENST00000337299 OSMP13725 252 aa12.63□□□□□ -0.39
COL2A1-201ENST00000337299 OR12D2P58182 307 aa12.63□□□□□ -0.39
COL2A1-201ENST00000337299 ELAVL2Q12926 359 aaKnown RBP12.63□□□□□ -0.39
COL2A1-201ENST00000337299 ELOAQ14241 798 aaKnown RBP12.63□□□□□ -0.39
COL2A1-201ENST00000337299 RGNQ15493 299 aa12.63□□□□□ -0.39
COL2A1-201ENST00000337299 MEDAGQ5VYS4 303 aa12.63□□□□□ -0.39
COL2A1-201ENST00000337299 METTL2BQ6P1Q9 378 aaKnown RBP12.63□□□□□ -0.39
COL2A1-201ENST00000337299 ZNF454Q8N9F8 522 aa12.63□□□□□ -0.39
COL2A1-201ENST00000337299 GIMAP1Q8WWP7 306 aa12.63□□□□□ -0.39
COL2A1-201ENST00000337299 METTL2AQ96IZ6 378 aaKnown RBP12.63□□□□□ -0.39
COL2A1-201ENST00000337299 PKMYT1Q99640 499 aa12.63□□□□□ -0.39
COL2A1-201ENST00000337299 ASB1Q9Y576 335 aa12.63□□□□□ -0.39
COL2A1-201ENST00000337299 USP3Q9Y6I4 520 aa12.63□□□□□ -0.39
COL2A1-201ENST00000337299 NAV1Q8NEY1 1877 aa12.63□□□□□ -0.39
COL2A1-201ENST00000337299 A0A1B0GVI7 797 aa12.63□□□□□ -0.39
COL2A1-201ENST00000337299 A0A1W2PRQ8 180 aa12.63□□□□□ -0.39
COL2A1-201ENST00000337299 PPM1BO75688 479 aa12.63□□□□□ -0.39
COL2A1-201ENST00000337299 CSF3P09919 207 aa12.63□□□□□ -0.39
COL2A1-201ENST00000337299 HOXD8P13378 290 aaPredicted RBP12.63□□□□□ -0.39
COL2A1-201ENST00000337299 RHCEP18577 417 aa12.63□□□□□ -0.39
COL2A1-201ENST00000337299 RPL17P18621 184 aaKnown RBP12.63□□□□□ -0.39
COL2A1-201ENST00000337299 ADH7P40394 386 aa12.63□□□□□ -0.39
COL2A1-201ENST00000337299 ZNF169Q14929 603 aaPredicted RBP12.63□□□□□ -0.39
COL2A1-201ENST00000337299 BEX5Q5H9J7 111 aa12.63□□□□□ -0.39
COL2A1-201ENST00000337299 IFNL1Q8IU54 200 aa12.63□□□□□ -0.39
COL2A1-201ENST00000337299 EPYCQ99645 322 aa12.63□□□□□ -0.39
COL2A1-201ENST00000337299 MGME1Q9BQP7 344 aa12.63□□□□□ -0.39
COL2A1-201ENST00000337299 RSPH9Q9H1X1 276 aaPredicted RBP12.63□□□□□ -0.39
COL2A1-201ENST00000337299 ASF1BQ9NVP2 202 aa12.63□□□□□ -0.39
COL2A1-201ENST00000337299 FBXW2Q9UKT8 454 aa12.63□□□□□ -0.39
COL2A1-201ENST00000337299 GLOD5A6NK44 160 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 ZNF670-ZNF695F2Z2N8 137 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 MUSKO15146 869 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 CACNG3O60359 315 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 IFNGP01579 166 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 CKBP12277 381 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 NPR2P20594 1047 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 EDNRAP25101 427 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 BDKRB1P46663 353 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 CCR6P51684 374 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 POLR2LP62875 67 aaKnown RBP12.62□□□□□ -0.39
COL2A1-201ENST00000337299 FGL1Q08830 312 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 FAM76BQ5HYJ3 339 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 KCTD9Q7L273 389 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 LRRC70Q7Z2Q7 622 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 NLRP8Q86W28 1048 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 C17orf64Q86WR6 236 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 TMIEQ8NEW7 156 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 STOML3Q8TAV4 291 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 ADAMTS19Q8TE59 1207 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 ZBED3Q96IU2 234 aaPredicted RBP12.62□□□□□ -0.39
COL2A1-201ENST00000337299 PAAF1Q9BRP4 392 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 KCNK12Q9HB15 430 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 NDRG4Q9ULP0 352 aaKnown RBP12.62□□□□□ -0.39
COL2A1-201ENST00000337299 ITGB4P16144 1822 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 A0A0X1KG70 313 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 MEIS3P2A8K0S8 358 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 ACADLP28330 430 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 CRISP3P54108 245 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 RAB5BP61020 215 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 ERVK-21P61565 698 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 EXOSC2Q13868 293 aaKnown RBP12.62□□□□□ -0.39
COL2A1-201ENST00000337299 LASP1Q14847 261 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms