RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 FBXW4P57775 412 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 ZNF234Q14588 700 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 FXNQ16595 210 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 OTPQ5XKR4 325 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 CBLL1Q75N03 491 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 GALNT7Q86SF2 657 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 PTOV1Q86YD1 416 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 SLC30A8Q8IWU4 369 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 OXR1Q8N573 874 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 SYT14Q8NB59 555 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 OR6K6Q8NGW6 343 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 SLC38A5Q8WUX1 472 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 PMEPA1Q969W9 287 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 C11orf24Q96F05 449 aaPredicted RBP7.82□□□□□ -1.16
HPS4-201ENST00000336873 VMP1Q96GC9 406 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 PDLIM5Q96HC4 596 aaKnown RBP7.82□□□□□ -1.16
HPS4-201ENST00000336873 GSTK1Q9Y2Q3 226 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 IFT52Q9Y366 437 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 OR10H1Q9Y4A9 318 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 TDRD6O60522 2096 aaKnown RBP7.82□□□□□ -1.16
HPS4-201ENST00000336873 GREB1Q4ZG55 1949 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 TRAV6A0A075B6T7 132 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 HEPACAM2A8MVW5 462 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 HCN1O60741 890 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 LDB3O75112 727 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 CPNE3O75131 537 aaKnown RBP7.82□□□□□ -1.16
HPS4-201ENST00000336873 TOXO94900 526 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 ASGR2P07307 311 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 CA3P07451 260 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 ALOX5P09917 674 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 PRR35P0CG20 571 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 ZNF30P17039 623 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 RPS3P23396 243 aaKnown RBP eCLIP7.82□□□□□ -1.16
HPS4-201ENST00000336873 GSTM4Q03013 218 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 PROX2Q3B8N5 592 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 INAVAQ3KP66 663 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 STEAP3Q658P3 488 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 C18orf63Q68DL7 685 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 IL20RBQ6UXL0 311 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 USP43Q70EL4 1123 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 HTR3DQ70Z44 454 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 GALNT12Q8IXK2 581 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 TIGD4Q8IY51 512 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 ATP6V1C2Q8NEY4 427 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 KLHL6Q8WZ60 621 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 CHFRQ96EP1 664 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 SPACA7Q96KW9 195 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 PIP5K1AQ99755 562 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 MCUBQ9NWR8 336 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 TMPRSS11EQ9UL52 423 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 INSL6Q9Y581 213 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 PCDHGA6Q9Y5G7 932 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 SPTA1P02549 2419 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 H0Y8X5 98 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 ARHGEF9O43307 516 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 SSX4O60224 188 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 SEC14L2O76054 403 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 RPN2P04844 631 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 ENDOUP21128 410 aaKnown RBP7.81□□□□□ -1.16
HPS4-201ENST00000336873 MC3RP41968 323 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 ZFP36L2P47974 494 aaKnown RBP7.81□□□□□ -1.16
HPS4-201ENST00000336873 RAB15P59190 212 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 LTB4RQ15722 352 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 ZMAT1Q5H9K5 638 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 FRMPD2BQ6IN97 320 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 FAM83HQ6ZRV2 1179 aaPredicted RBP7.81□□□□□ -1.16
HPS4-201ENST00000336873 MARCH9Q86YJ5 346 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 ANKRD13BQ86YJ7 626 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 SDR16C5Q8N3Y7 309 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 TRAM1L1Q8N609 369 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 ZNF784Q8NCA9 323 aaPredicted RBP7.81□□□□□ -1.16
HPS4-201ENST00000336873 VN1R2Q8NFZ6 395 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 TANKQ92844 425 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 SLC35B4Q969S0 331 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 RIPOR3Q96MK2 946 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 SLC38A2Q96QD8 506 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 MED20Q9H944 212 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 DMRT3Q9NQL9 472 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 PHPT1Q9NRX4 125 aaPredicted RBP7.81□□□□□ -1.16
HPS4-201ENST00000336873 COQ3Q9NZJ6 369 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 ERVK-11Q9UQG0 969 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 A0A1W2PS29 197 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 CCRL2O00421 344 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 B4GALT2O60909 372 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 PEX14O75381 377 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 RPP14O95059 124 aaKnown RBP7.81□□□□□ -1.16
HPS4-201ENST00000336873 HLA-DQA2P01906 255 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 CTSAP10619 480 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 CTSEP14091 401 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 TALDO1P37837 337 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 CD97P48960 835 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 TUBA3CQ13748 450 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 MINDY4Q4G0A6 757 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 TOR1AIP1Q5JTV8 583 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 ARMC6Q6NXE6 501 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 PLEKHG7Q6ZR37 379 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 ERN2Q76MJ5 926 aaKnown RBP7.81□□□□□ -1.16
HPS4-201ENST00000336873 IZUMO1Q8IYV9 350 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 OR4F15Q8NGB8 312 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 OR9A2Q8NGT5 310 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms