RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 GLOD5A6NK44 160 aa14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 ALPPL2P10696 532 aa14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 MYL9P24844 172 aa14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 PKLRP30613 574 aa14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 RPS5P46782 204 aaKnown RBP14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 CSNK2BP67870 215 aa14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 RPS26P11Q5JNZ5 115 aaPredicted RBP14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 PSRC1Q6PGN9 363 aaPredicted RBP14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 B3GNT7Q8NFL0 401 aa14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 RAB8BQ92930 207 aa14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 C11orf24Q96F05 449 aaPredicted RBP14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 ASPNQ9BXN1 380 aa14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 GABARAPL3Q9BY60 117 aa14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 SLC6A16Q9GZN6 736 aa14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 MS4A12Q9NXJ0 267 aa14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 COQ3Q9NZJ6 369 aa14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 SATB2Q9UPW6 733 aa14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 DNMT3AQ9Y6K1 912 aaPredicted RBP14.76□□□□□ -0.05
SHROOM1-201ENST00000319854 A0A1W2PP55 124 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 EFCAB10A6NFE3 127 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 KIR2DL3P43628 341 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 FBXO43Q4G163 708 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 C19orf48Q6RUI8 117 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 TMPRSS11AQ6ZMR5 421 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 CBLL1Q75N03 491 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 EIF3MQ7L2H7 374 aaKnown RBP14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 ABI3BPQ7Z7G0 1075 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 CACTIN-AS1Q8N1I8 211 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 LSMEM1Q8N8F7 131 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 NLGN4YQ8NFZ3 816 aaPredicted RBP14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 UTP15Q8TED0 518 aaKnown RBP14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 SMARCD2Q92925 531 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 EXOSC8Q96B26 276 aaKnown RBP14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 REPS1Q96D71 796 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 PPP1R16AQ96I34 528 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 BRF2Q9HAW0 419 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 SNTG1Q9NSN8 517 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 A0A075B6Q4 140 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 C1orf226A1L170 272 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 FAM227AF5H4B4 570 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 GCM2O75603 506 aaPredicted RBP14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 C9P02748 559 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 GABRB1P18505 474 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 POU3F3P20264 500 aaPredicted RBP14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 SPIBQ01892 262 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 GAB4Q2WGN9 574 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 C9orf50Q5SZB4 431 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 TSEN54Q7Z6J9 526 aaKnown RBP14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 NRSN1Q8IZ57 195 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 WFIKKN2Q8TEU8 576 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 PRSS16Q9NQE7 514 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 A0A1W2PRB8 838 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 CCDC182A6NF36 153 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 ANKDD1BA6NHY2 528 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 LEUTXA8MZ59 168 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 TMCC2O75069 709 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 TRAPPC2P0DI81 140 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 TRAPPC2BP0DI82 140 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 CD72P21854 359 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 SSTR4P31391 388 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 PBX2P40425 430 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 SCARB2Q14108 478 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 C2orf27AQ580R0 203 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 ANXA8L1Q5VT79 327 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 MLIPQ5VWP3 458 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 SYNPOQ8N3V7 929 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 GTPBP3Q969Y2 492 aaKnown RBP14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 C7orf34Q96L11 122 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 EFCAB11Q9BUY7 163 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 HDHD5Q9BXW7 423 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 PLXND1Q9Y4D7 1925 aa14.75□□□□□ -0.05
SHROOM1-201ENST00000319854 WDR87Q6ZQQ6 2873 aa14.74□□□□□ -0.05
SHROOM1-201ENST00000319854 OR52A4PA6NMU1 304 aa14.74□□□□□ -0.05
SHROOM1-201ENST00000319854 WWP2O00308 870 aa14.74□□□□□ -0.05
SHROOM1-201ENST00000319854 PRKRAO75569 313 aaKnown RBP14.74□□□□□ -0.05
SHROOM1-201ENST00000319854 PAPLNO95428 1278 aa14.74□□□□□ -0.05
SHROOM1-201ENST00000319854 ITGA1P56199 1179 aa14.74□□□□□ -0.05
SHROOM1-201ENST00000319854 KCNJ10P78508 379 aa14.74□□□□□ -0.05
SHROOM1-201ENST00000319854 FCHO2Q0JRZ9 810 aa14.74□□□□□ -0.05
SHROOM1-201ENST00000319854 WSCD2Q2TBF2 565 aa14.74□□□□□ -0.05
SHROOM1-201ENST00000319854 LAMTOR1Q6IAA8 161 aa14.74□□□□□ -0.05
SHROOM1-201ENST00000319854 ZNF605Q86T29 641 aa14.74□□□□□ -0.05
SHROOM1-201ENST00000319854 RASGRP3Q8IV61 690 aa14.74□□□□□ -0.05
SHROOM1-201ENST00000319854 RDH10Q8IZV5 341 aa14.74□□□□□ -0.05
SHROOM1-201ENST00000319854 SLC5A8Q8N695 610 aa14.74□□□□□ -0.05
SHROOM1-201ENST00000319854 OR9Q2Q8NGE9 314 aa14.74□□□□□ -0.05
SHROOM1-201ENST00000319854 NACC2Q96BF6 587 aa14.74□□□□□ -0.05
SHROOM1-201ENST00000319854 CCDC120Q96HB5 630 aa14.74□□□□□ -0.05
SHROOM1-201ENST00000319854 HHIPQ96QV1 700 aa14.74□□□□□ -0.05
SHROOM1-201ENST00000319854 NIPSNAP1Q9BPW8 284 aa14.74□□□□□ -0.05
SHROOM1-201ENST00000319854 PRMT3O60678 531 aa14.74□□□□□ -0.05
SHROOM1-201ENST00000319854 NME6O75414 186 aaPredicted RBP14.74□□□□□ -0.05
SHROOM1-201ENST00000319854 CSF3P09919 207 aa14.74□□□□□ -0.05
SHROOM1-201ENST00000319854 FURINP09958 794 aa14.74□□□□□ -0.05
SHROOM1-201ENST00000319854 POU1F1P28069 291 aa14.74□□□□□ -0.05
SHROOM1-201ENST00000319854 SOX3P41225 446 aa14.74□□□□□ -0.05
SHROOM1-201ENST00000319854 TARDBPQ13148 414 aaKnown RBP eCLIP14.74□□□□□ -0.05
SHROOM1-201ENST00000319854 ERICH5Q6P6B1 374 aa14.74□□□□□ -0.05
SHROOM1-201ENST00000319854 AMIGO1Q86WK6 493 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms