RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 SLC9A8Q9Y2E8 581 aa13.14□□□□□ -0.31
VAMP2-201ENST00000316509 SCAMP1O15126 338 aa13.14□□□□□ -0.31
VAMP2-201ENST00000316509 B3GALT2O43825 422 aa13.14□□□□□ -0.31
VAMP2-201ENST00000316509 SLITRK5O94991 958 aa13.14□□□□□ -0.31
VAMP2-201ENST00000316509 H1F0P07305 194 aaKnown RBP13.14□□□□□ -0.31
VAMP2-201ENST00000316509 TNFRSF17Q02223 184 aa13.14□□□□□ -0.31
VAMP2-201ENST00000316509 EMX1Q04741 257 aaPredicted RBP13.14□□□□□ -0.31
VAMP2-201ENST00000316509 DCST1Q5T197 706 aa13.14□□□□□ -0.31
VAMP2-201ENST00000316509 TCTN3Q6NUS6 607 aa13.14□□□□□ -0.31
VAMP2-201ENST00000316509 ENTHD1Q8IYW4 607 aa13.14□□□□□ -0.31
VAMP2-201ENST00000316509 ZNF540Q8NDQ6 660 aa13.14□□□□□ -0.31
VAMP2-201ENST00000316509 OR13H1Q8NG92 308 aa13.14□□□□□ -0.31
VAMP2-201ENST00000316509 MYDGFQ969H8 173 aa13.14□□□□□ -0.31
VAMP2-201ENST00000316509 COL21A1Q96P44 957 aa13.14□□□□□ -0.31
VAMP2-201ENST00000316509 PHF7Q9BWX1 381 aaPredicted RBP13.14□□□□□ -0.31
VAMP2-201ENST00000316509 PINK1Q9BXM7 581 aa13.14□□□□□ -0.31
VAMP2-201ENST00000316509 CD93Q9NPY3 652 aa13.14□□□□□ -0.31
VAMP2-201ENST00000316509 SNX11Q9Y5W9 270 aa13.14□□□□□ -0.31
VAMP2-201ENST00000316509 SPACA6W5XKT8 324 aa13.14□□□□□ -0.31
VAMP2-201ENST00000316509 SPTY2D1-AS1A0A0U1RR47 76 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 GSAPA4D1B5 854 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 SH3D21A4FU49 640 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 OR6C74A6NCV1 312 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 SYT5O00445 386 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 PCDH17O14917 1159 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 ZNF217O75362 1048 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 SRFP11831 508 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 HOXB3P14651 431 aaPredicted RBP13.13□□□□□ -0.31
VAMP2-201ENST00000316509 FMO3P31513 532 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 GPR18Q14330 331 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 RPS26P11Q5JNZ5 115 aaPredicted RBP13.13□□□□□ -0.31
VAMP2-201ENST00000316509 SYT6Q5T7P8 510 aaPredicted RBP13.13□□□□□ -0.31
VAMP2-201ENST00000316509 C18orf63Q68DL7 685 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 FCRL6Q6DN72 434 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 ZNF770Q6IQ21 691 aaPredicted RBP13.13□□□□□ -0.31
VAMP2-201ENST00000316509 SLC44A2Q8IWA5 706 aaPredicted RBP13.13□□□□□ -0.31
VAMP2-201ENST00000316509 GJD3Q8N144 294 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 NUP43Q8NFH3 380 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 OR4K14Q8NGD5 310 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 OR52J3Q8NH60 311 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 RERGQ96A58 199 aaPredicted RBP13.13□□□□□ -0.31
VAMP2-201ENST00000316509 TRNT1Q96Q11 434 aaKnown RBP13.13□□□□□ -0.31
VAMP2-201ENST00000316509 ZFYVE21Q9BQ24 234 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 MACROD1Q9BQ69 325 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 CCDC90BQ9GZT6 254 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 C6orf106Q9H6K1 298 aaPredicted RBP13.13□□□□□ -0.31
VAMP2-201ENST00000316509 NMNAT1Q9HAN9 279 aaPredicted RBP13.13□□□□□ -0.31
VAMP2-201ENST00000316509 PAK1IP1Q9NWT1 392 aaPredicted RBP13.13□□□□□ -0.31
VAMP2-201ENST00000316509 WSB2Q9NYS7 404 aaPredicted RBP13.13□□□□□ -0.31
VAMP2-201ENST00000316509 RNF6Q9Y252 685 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 PCDHGA10Q9Y5H3 936 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 A0A0J9YY10 115 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 J3KTA2 159 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 MBTPS2O43462 519 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 XPNPEP2O43895 674 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 PCDHGA12O60330 932 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 WBP4O75554 376 aaKnown RBP13.13□□□□□ -0.31
VAMP2-201ENST00000316509 LGI1O95970 557 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 HMGN2P05204 90 aaKnown RBP13.13□□□□□ -0.31
VAMP2-201ENST00000316509 ZNF888P0CJ79 500 aaPredicted RBP13.13□□□□□ -0.31
VAMP2-201ENST00000316509 POLR2CP19387 275 aaPredicted RBP13.13□□□□□ -0.31
VAMP2-201ENST00000316509 CPN2P22792 545 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 ACVR2AP27037 513 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 CDC42P60953 191 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 COX10Q12887 443 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 SYPL1Q16563 259 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 ATAD3BQ5T9A4 648 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 USP53Q70EK8 1073 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 CCDC71Q8IV32 467 aaPredicted RBP13.13□□□□□ -0.31
VAMP2-201ENST00000316509 BAHD1Q8TBE0 780 aaPredicted RBP13.13□□□□□ -0.31
VAMP2-201ENST00000316509 FAR1Q8WVX9 515 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 JPH3Q8WXH2 748 aaPredicted RBP13.13□□□□□ -0.31
VAMP2-201ENST00000316509 FKBP10Q96AY3 582 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 TOE1Q96GM8 510 aaKnown RBP13.13□□□□□ -0.31
VAMP2-201ENST00000316509 C10orf90Q96M02 699 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 DGCR6LQ9BY27 220 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 ACTRT3Q9BYD9 372 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 CHRDQ9H2X0 955 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 KCMF1Q9P0J7 381 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 ERVK-18Q9QC07 812 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 PNMA8BQ9ULN7 279 aaPredicted RBP13.13□□□□□ -0.31
VAMP2-201ENST00000316509 KLHL20Q9Y2M5 609 aa13.13□□□□□ -0.31
VAMP2-201ENST00000316509 DOCK9Q9BZ29 2069 aa13.12□□□□□ -0.31
VAMP2-201ENST00000316509 A0A1W2PRQ8 180 aa13.12□□□□□ -0.31
VAMP2-201ENST00000316509 PRAMEF27A3QJZ7 478 aa13.12□□□□□ -0.31
VAMP2-201ENST00000316509 ATE1O95260 518 aa13.12□□□□□ -0.31
VAMP2-201ENST00000316509 MAGP20916 626 aa13.12□□□□□ -0.31
VAMP2-201ENST00000316509 CD72P21854 359 aa13.12□□□□□ -0.31
VAMP2-201ENST00000316509 EPHA2P29317 976 aa13.12□□□□□ -0.31
VAMP2-201ENST00000316509 CD6P30203 668 aa13.12□□□□□ -0.31
VAMP2-201ENST00000316509 CRISP1P54107 249 aa13.12□□□□□ -0.31
VAMP2-201ENST00000316509 LIM2P55344 173 aa13.12□□□□□ -0.31
VAMP2-201ENST00000316509 EIF2B5Q13144 721 aaKnown RBP13.12□□□□□ -0.31
VAMP2-201ENST00000316509 ILKQ13418 452 aa13.12□□□□□ -0.31
VAMP2-201ENST00000316509 DGCR6Q14129 220 aa13.12□□□□□ -0.31
VAMP2-201ENST00000316509 NDUFA9Q16795 377 aa13.12□□□□□ -0.31
VAMP2-201ENST00000316509 GPR153Q6NV75 609 aa13.12□□□□□ -0.31
VAMP2-201ENST00000316509 RNF44Q7L0R7 432 aa13.12□□□□□ -0.31
VAMP2-201ENST00000316509 CROCCP3Q8IVE0 287 aa13.12□□□□□ -0.31
VAMP2-201ENST00000316509 LRRC25Q8N386 305 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms