RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 CTHRC1Q96CG8 243 aa13.47□□□□□ -0.25
PPP1CA-201ENST00000312989 ART5Q96L15 291 aa13.47□□□□□ -0.25
PPP1CA-201ENST00000312989 ZDHHC11Q9H8X9 412 aa13.47□□□□□ -0.25
PPP1CA-201ENST00000312989 WDR41Q9HAD4 459 aa13.47□□□□□ -0.25
PPP1CA-201ENST00000312989 PRM3Q9NNZ6 103 aa13.47□□□□□ -0.25
PPP1CA-201ENST00000312989 TIMMDC1Q9NPL8 285 aa13.47□□□□□ -0.25
PPP1CA-201ENST00000312989 MAT2BQ9NZL9 334 aa13.47□□□□□ -0.25
PPP1CA-201ENST00000312989 MCM8Q9UJA3 840 aa13.47□□□□□ -0.25
PPP1CA-201ENST00000312989 SVILO95425 2214 aa13.46□□□□□ -0.25
PPP1CA-201ENST00000312989 TRGV8A0A0C4DH27 118 aa13.46□□□□□ -0.25
PPP1CA-201ENST00000312989 OR6C76A6NM76 312 aa13.46□□□□□ -0.25
PPP1CA-201ENST00000312989 KLRC4-KLRK1H3BQV0 150 aa13.46□□□□□ -0.25
PPP1CA-201ENST00000312989 OR10H2O60403 315 aa13.46□□□□□ -0.25
PPP1CA-201ENST00000312989 ULK1O75385 1050 aa13.46□□□□□ -0.25
PPP1CA-201ENST00000312989 MYL2P10916 166 aa13.46□□□□□ -0.25
PPP1CA-201ENST00000312989 KRT15P19012 456 aa13.46□□□□□ -0.25
PPP1CA-201ENST00000312989 XKP51811 444 aa13.46□□□□□ -0.25
PPP1CA-201ENST00000312989 TRA2BP62995 288 aaKnown RBP13.46□□□□□ -0.25
PPP1CA-201ENST00000312989 CDSNQ15517 529 aa13.46□□□□□ -0.25
PPP1CA-201ENST00000312989 HYAL4Q2M3T9 481 aa13.46□□□□□ -0.25
PPP1CA-201ENST00000312989 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.46□□□□□ -0.25
PPP1CA-201ENST00000312989 CRYBG3Q68DQ2 2970 aa13.46□□□□□ -0.25
PPP1CA-201ENST00000312989 OPN5Q6U736 354 aa13.46□□□□□ -0.25
PPP1CA-201ENST00000312989 SCIMPQ6UWF3 145 aa13.46□□□□□ -0.25
PPP1CA-201ENST00000312989 BNC2Q6ZN30 1099 aaPredicted RBP13.46□□□□□ -0.25
PPP1CA-201ENST00000312989 RNF111Q6ZNA4 994 aa13.46□□□□□ -0.25
PPP1CA-201ENST00000312989 NCCRP1Q6ZVX7 275 aaPredicted RBP13.46□□□□□ -0.25
PPP1CA-201ENST00000312989 GBP7Q8N8V2 638 aaPredicted RBP13.46□□□□□ -0.25
PPP1CA-201ENST00000312989 OR4K14Q8NGD5 310 aa13.46□□□□□ -0.25
PPP1CA-201ENST00000312989 RDH11Q8TC12 318 aa13.46□□□□□ -0.25
PPP1CA-201ENST00000312989 PAQR8Q8TEZ7 354 aa13.46□□□□□ -0.25
PPP1CA-201ENST00000312989 CAVIN3Q969G5 261 aa13.46□□□□□ -0.25
PPP1CA-201ENST00000312989 SPACA9Q96E40 222 aaPredicted RBP13.46□□□□□ -0.25
PPP1CA-201ENST00000312989 SGCZQ96LD1 299 aa13.46□□□□□ -0.25
PPP1CA-201ENST00000312989 TTTY12Q9BZ98 90 aa13.46□□□□□ -0.25
PPP1CA-201ENST00000312989 MID1IP1Q9NPA3 183 aa13.46□□□□□ -0.25
PPP1CA-201ENST00000312989 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.46□□□□□ -0.25
PPP1CA-201ENST00000312989 GRID1Q9ULK0 1009 aa13.46□□□□□ -0.25
PPP1CA-201ENST00000312989 EXO1Q9UQ84 846 aaKnown RBP13.46□□□□□ -0.25
PPP1CA-201ENST00000312989 STK38LQ9Y2H1 464 aa13.46□□□□□ -0.25
PPP1CA-201ENST00000312989 CHCHD2Q9Y6H1 151 aaPredicted RBP13.46□□□□□ -0.25
PPP1CA-201ENST00000312989 V9GYY5 206 aaPredicted RBP13.46□□□□□ -0.25
PPP1CA-201ENST00000312989 FBN2P35556 2912 aa13.46□□□□□ -0.25
PPP1CA-201ENST00000312989 LRRC3CA6NJW4 275 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 NPIPB8E9PQR5 432 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 CBX7O95931 251 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 IL3P08700 152 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 CPA3P15088 417 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 CREB1P16220 341 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 PIK3R1P27986 724 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 HMOX2P30519 316 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 TIA1P31483 386 aaKnown RBP eCLIP13.45□□□□□ -0.261e-22■■■■■ 32.6
PPP1CA-201ENST00000312989 CCT5P48643 541 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 DNASE1L1P49184 302 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 MAP4K2Q12851 820 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 LTB4RQ15722 352 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 CEBPEQ15744 281 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 FAM111BQ6SJ93 734 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 TRIM46Q7Z4K8 759 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 DOLPP1Q86YN1 238 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 GHDCQ8N2G8 530 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 SLC15A4Q8N697 577 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 CCNYL1Q8N7R7 359 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 CCDC126Q96EE4 140 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 PHF12Q96QT6 1004 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 DMRTA2Q96SC8 542 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 GATA5Q9BWX5 397 aaPredicted RBP13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 CNOT11Q9UKZ1 510 aaKnown RBP13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 ERVK-11Q9UQG0 969 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 PLLPQ9Y342 182 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 LIPGQ9Y5X9 500 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 ADGRG4Q8IZF6 3080 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 ZGRF1Q86YA3 2104 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 CCL21O00585 134 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 COPEO14579 308 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 PCDH7O60245 1069 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 SLU7O95391 586 aaKnown RBP13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 CELA3AP09093 270 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 PORP16435 677 aaPredicted RBP13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 CNR1P21554 472 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 GPX3P22352 226 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 SERPINB3P29508 390 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 ARRB2P32121 409 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 PIGAP37287 484 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 FEN1P39748 380 aaKnown RBP13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 DCTP40126 519 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 KIAA0040Q15053 153 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 NTRK2Q16620 822 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 ZNF628Q5EBL2 1059 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 EMC4Q5J8M3 183 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 LIPMQ5VYY2 423 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 ZNF787Q6DD87 383 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 EMBQ6PCB8 327 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 TMEM64Q6YI46 380 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 C10orf107Q8IVU9 208 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 RIBC1Q8N443 379 aaPredicted RBP13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 MREGQ8N565 214 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 TMEM251Q8N6I4 163 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 OR10G3Q8NGC4 313 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 OR6Y1Q8NGX8 325 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms