RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 SRPX2O60687 465 aaPredicted RBP20.95■□□□□ 0.94
SMAD1-201ENST00000302085 H6PDO95479 791 aa20.95■□□□□ 0.94
SMAD1-201ENST00000302085 CPMP14384 443 aa20.95■□□□□ 0.94
SMAD1-201ENST00000302085 CTSKP43235 329 aa20.95■□□□□ 0.94
SMAD1-201ENST00000302085 GABRA4P48169 554 aa20.95■□□□□ 0.94
SMAD1-201ENST00000302085 RXRGP48443 463 aa20.95■□□□□ 0.94
SMAD1-201ENST00000302085 ARHGDIAP52565 204 aa20.95■□□□□ 0.94
SMAD1-201ENST00000302085 PRR5P85299 388 aa20.95■□□□□ 0.94
SMAD1-201ENST00000302085 SRSF5Q13243 272 aaKnown RBP20.95■□□□□ 0.94
SMAD1-201ENST00000302085 CYP4Z1Q86W10 505 aa20.95■□□□□ 0.94
SMAD1-201ENST00000302085 SAMD14Q8IZD0 417 aaPredicted RBP20.95■□□□□ 0.94
SMAD1-201ENST00000302085 OFCC1Q8IZS5 231 aa20.95■□□□□ 0.94
SMAD1-201ENST00000302085 METTL25Q8N6Q8 603 aa20.95■□□□□ 0.94
SMAD1-201ENST00000302085 COL26A1Q96A83 441 aa20.95■□□□□ 0.94
SMAD1-201ENST00000302085 ZNF300Q96RE9 604 aaPredicted RBP20.95■□□□□ 0.94
SMAD1-201ENST00000302085 TREX2Q9BQ50 279 aaPredicted RBP20.95■□□□□ 0.94
SMAD1-201ENST00000302085 NPLQ9BXD5 320 aaPredicted RBP20.95■□□□□ 0.94
SMAD1-201ENST00000302085 AMBRA1Q9C0C7 1298 aa20.95■□□□□ 0.94
SMAD1-201ENST00000302085 RUBCNLQ9H714 662 aa20.95■□□□□ 0.94
SMAD1-201ENST00000302085 THSD1Q9NS62 852 aa20.95■□□□□ 0.94
SMAD1-201ENST00000302085 FAM118AQ9NWS6 357 aa20.95■□□□□ 0.94
SMAD1-201ENST00000302085 PDP1Q9P0J1 537 aaPredicted RBP20.95■□□□□ 0.94
SMAD1-201ENST00000302085 SH3GLB1Q9Y371 365 aa20.95■□□□□ 0.94
SMAD1-201ENST00000302085 KCNE3Q9Y6H6 103 aa20.95■□□□□ 0.94
SMAD1-201ENST00000302085 MED26O95402 600 aa20.94■□□□□ 0.94
SMAD1-201ENST00000302085 GIMD1P0DJR0 217 aa20.94■□□□□ 0.94
SMAD1-201ENST00000302085 NR2F1P10589 423 aa20.94■□□□□ 0.94
SMAD1-201ENST00000302085 TDGF1P13385 188 aa20.94■□□□□ 0.94
SMAD1-201ENST00000302085 ALDH4A1P30038 563 aa20.94■□□□□ 0.94
SMAD1-201ENST00000302085 RRM2P31350 389 aa20.94■□□□□ 0.94
SMAD1-201ENST00000302085 SOX18P35713 384 aa20.94■□□□□ 0.94
SMAD1-201ENST00000302085 YAP1P46937 504 aaKnown RBP20.94■□□□□ 0.94
SMAD1-201ENST00000302085 DAPP51397 102 aa20.94■□□□□ 0.94
SMAD1-201ENST00000302085 SHC2P98077 582 aa20.94■□□□□ 0.94
SMAD1-201ENST00000302085 ID2Q02363 134 aa20.94■□□□□ 0.94
SMAD1-201ENST00000302085 SHBQ15464 509 aa20.94■□□□□ 0.94
SMAD1-201ENST00000302085 C6orf132Q5T0Z8 1188 aa20.94■□□□□ 0.94
SMAD1-201ENST00000302085 OR7G2Q8NG99 324 aa20.94■□□□□ 0.94
SMAD1-201ENST00000302085 GPR32P1Q8NGA4 272 aa20.94■□□□□ 0.94
SMAD1-201ENST00000302085 OR9A4Q8NGU2 314 aa20.94■□□□□ 0.94
SMAD1-201ENST00000302085 GEMIN6Q8WXD5 167 aaKnown RBP20.94■□□□□ 0.94
SMAD1-201ENST00000302085 NCSTNQ92542 709 aa20.94■□□□□ 0.94
SMAD1-201ENST00000302085 EPYCQ99645 322 aa20.94■□□□□ 0.94
SMAD1-201ENST00000302085 ZNF451Q9Y4E5 1061 aa20.94■□□□□ 0.94
SMAD1-201ENST00000302085 PCDHGB3Q9Y5G1 929 aa20.94■□□□□ 0.94
SMAD1-201ENST00000302085 TP53BP1Q12888 1972 aaPredicted RBP20.94■□□□□ 0.94
SMAD1-201ENST00000302085 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.94■□□□□ 0.94
SMAD1-201ENST00000302085 IGHV5-51A0A0C4DH38 117 aa20.94■□□□□ 0.94
SMAD1-201ENST00000302085 TMEM247A6NEH6 219 aa20.94■□□□□ 0.94
SMAD1-201ENST00000302085 MITFO75030 526 aaPredicted RBP20.94■□□□□ 0.94
SMAD1-201ENST00000302085 NME6O75414 186 aaPredicted RBP20.94■□□□□ 0.94
SMAD1-201ENST00000302085 DHPSP49366 369 aaPredicted RBP20.94■□□□□ 0.94
SMAD1-201ENST00000302085 PPM1FP49593 454 aaPredicted RBP20.94■□□□□ 0.94
SMAD1-201ENST00000302085 MAN2A2P49641 1150 aa20.94■□□□□ 0.94
SMAD1-201ENST00000302085 EPHA4P54764 986 aa20.94■□□□□ 0.94
SMAD1-201ENST00000302085 FUT5Q11128 374 aa20.94■□□□□ 0.94
SMAD1-201ENST00000302085 PUM1Q14671 1186 aaKnown RBP eCLIP20.94■□□□□ 0.94
SMAD1-201ENST00000302085 OLIG3Q7RTU3 272 aa20.94■□□□□ 0.94
SMAD1-201ENST00000302085 APOBEC4Q8WW27 367 aaKnown RBP20.94■□□□□ 0.94
SMAD1-201ENST00000302085 GIMAP5Q96F15 307 aa20.94■□□□□ 0.94
SMAD1-201ENST00000302085 MUS81Q96NY9 551 aa20.94■□□□□ 0.94
SMAD1-201ENST00000302085 ZNF347Q96SE7 839 aa20.94■□□□□ 0.94
SMAD1-201ENST00000302085 RAB33BQ9H082 229 aa20.94■□□□□ 0.94
SMAD1-201ENST00000302085 ANKHQ9HCJ1 492 aa20.94■□□□□ 0.94
SMAD1-201ENST00000302085 NTMQ9P121 344 aa20.94■□□□□ 0.94
SMAD1-201ENST00000302085 EPHA6Q9UF33 1036 aa20.94■□□□□ 0.94
SMAD1-201ENST00000302085 TESMINQ9Y4I5 508 aa20.94■□□□□ 0.94
SMAD1-201ENST00000302085 CSNK1G3Q9Y6M4 447 aa20.94■□□□□ 0.94
SMAD1-201ENST00000302085 SPACA6W5XKT8 324 aa20.94■□□□□ 0.94
SMAD1-201ENST00000302085 PCDH15Q96QU1 1955 aa20.93■□□□□ 0.94
SMAD1-201ENST00000302085 FGF17O60258 216 aa20.93■□□□□ 0.94
SMAD1-201ENST00000302085 LDB3O75112 727 aa20.93■□□□□ 0.94
SMAD1-201ENST00000302085 RDH16O75452 317 aa20.93■□□□□ 0.94
SMAD1-201ENST00000302085 PDE9AO76083 593 aa20.93■□□□□ 0.94
SMAD1-201ENST00000302085 PORP16435 677 aaPredicted RBP20.93■□□□□ 0.94
SMAD1-201ENST00000302085 ANXA11P50995 505 aaKnown RBP20.93■□□□□ 0.94
SMAD1-201ENST00000302085 OR1D5P58170 312 aa20.93■□□□□ 0.94
SMAD1-201ENST00000302085 LYSMD4Q5XG99 296 aa20.93■□□□□ 0.94
SMAD1-201ENST00000302085 WDR5BQ86VZ2 330 aa20.93■□□□□ 0.94
SMAD1-201ENST00000302085 OR7D2Q96RA2 312 aa20.93■□□□□ 0.94
SMAD1-201ENST00000302085 EQTNQ9NQ60 294 aa20.93■□□□□ 0.94
SMAD1-201ENST00000302085 MYRFQ9Y2G1 1151 aa20.93■□□□□ 0.94
SMAD1-201ENST00000302085 SCN2AQ99250 2005 aa20.93■□□□□ 0.94
SMAD1-201ENST00000302085 SEC24DO94855 1032 aaPredicted RBP20.92■□□□□ 0.94
SMAD1-201ENST00000302085 LINGO3P0C6S8 592 aa20.92■□□□□ 0.94
SMAD1-201ENST00000302085 KCNAB2Q13303 367 aa20.92■□□□□ 0.94
SMAD1-201ENST00000302085 SIMC1Q8NDZ2 872 aa20.92■□□□□ 0.94
SMAD1-201ENST00000302085 RMND5BQ96G75 393 aaPredicted RBP20.92■□□□□ 0.94
SMAD1-201ENST00000302085 ZNF285Q96NJ3 590 aa20.92■□□□□ 0.94
SMAD1-201ENST00000302085 ZNF607Q96SK3 696 aa20.92■□□□□ 0.94
SMAD1-201ENST00000302085 LYVE1Q9Y5Y7 322 aa20.92■□□□□ 0.94
SMAD1-201ENST00000302085 GPC6Q9Y625 555 aaPredicted RBP20.92■□□□□ 0.94
SMAD1-201ENST00000302085 TLCD2A6NGC4 264 aa20.92■□□□□ 0.94
SMAD1-201ENST00000302085 J3KTA2 159 aa20.92■□□□□ 0.94
SMAD1-201ENST00000302085 CHST10O43529 356 aa20.92■□□□□ 0.94
SMAD1-201ENST00000302085 GPR75O95800 540 aa20.92■□□□□ 0.94
SMAD1-201ENST00000302085 FESP07332 822 aa20.92■□□□□ 0.94
SMAD1-201ENST00000302085 CHRM4P08173 479 aa20.92■□□□□ 0.94
SMAD1-201ENST00000302085 ITGA2P17301 1181 aa20.92■□□□□ 0.94
SMAD1-201ENST00000302085 PIGAP37287 484 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms